Array 1 12933-15582 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCNC01000050.1 Klebsiella pneumoniae strain COL-Kpn50 contig_17_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 12933 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 12994 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 13055 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 13116 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 13178 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 13239 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 13300 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 13361 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 13422 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 13483 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 13544 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 13605 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 13666 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 13727 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 13788 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 13849 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 13910 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 13971 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 14032 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 14093 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 14154 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 14215 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 14276 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 14337 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 14398 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 14459 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 14520 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 14581 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 14642 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 14703 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 14764 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 14825 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 14886 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 14947 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 15008 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 15069 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 15130 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 15191 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 15252 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 15313 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 15374 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 15435 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 15496 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 15554 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //