Array 1 50107-50329 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDKT010000003.1 Fusobacterium ulcerans strain DFI.2.86 MHFABIGE_3, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 50107 29 100.0 36 ............................. CAAACTATGGTAATATACCATAAAGAGGTGAAATTA 50172 29 100.0 36 ............................. GTTGAAAAAGTAAGAGATGAAGCCGATGGAGTTGTT 50237 29 100.0 35 ............................. GCTGGACCAAAGAAACATACTCCTACTGGTGGAAC 50301 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ==================================== ================== 4 29 100.0 36 GTTGAATATTAACTGAGTAGTTTTTAAAT # Left flank : TAGGATTATGGCTGGGAAGCTTTATTGCTAAATATATCTATATGAGAATAAAGTTTTTTATCAATAGAATAGGGAGCAAAGGAGAGCAAAAAGACTATAAAATCATAAAAATGATTATAGAGCAGAAAAAATATTTTAAAAAACCAGGAAGTAAATATTATATAAATTTTTACTATATGATAGCAGATGTAAATGGCGAGGAAGTAAAATTCCTTATTGAAAAGGATTTTTATGATAAATATTTAGGGAAAAAGACTATGAATATTAAGATAAAAAAAGGGTCACTTGGAATTATGTATGGAGTAAATTTAGTAGATTAGAGATAAAAAGTTTCCAAGTTGGAAAATTGAATATTTTTTCTAAGGTATATTTTAAGAGCAATTTGGAAGGAAAAAATTATTTTATAAAAATTTTACTGCACTTGGAAAAAAAGAAGGAAAAGCTTGATAAAATCATGAATAGAGGGATTGATAAATATTGTGAAGTTTGATTTTATGAGT # Right flank : TGTATTAGCAAGATATCTTTTTAAATAGTTATAATCAGTATAACAGTAACTTTGAAGACCTGACCTTTTATTCTCATATTTTGAGCAATATTGTATAACAGTAACTTTAAAGTTTTTCTTAATAATGTTTATTATCTTTATCTATCCATATTAGCCTTATTATTGCAATTATAACAACAACTATTATTATTTGTAATGCTGGTGGGGCATTAAAAAAGAACAGGAGTTCTCCTAATCTTTGCAGTAAAAATACCCATGTAAACCATAGTATCGCTAAACCTATCAATAGATTTTTTAATAGTTTCATAATTTCACCTCTTTATGGTATATTACCATAGTTTTGATAAATATGCTGTTGTATAATTGCTTTAAAGAATTGAATTGTGTTTTTATAAGTGAATAATTTTCAAAGAATATTAACTGAGAGGCCTCAAACGAAAAACTGCACCTTCTATCTTAACCATCTAAGATTTGCAGTATATTTTTATCCAGCTGAAATA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAATATTAACTGAGTAGTTTTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 62388-62744 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDKT010000012.1 Fusobacterium ulcerans strain DFI.2.86 MHFABIGE_12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 62388 29 100.0 38 ............................. TTTTGTTCTTGATTAGACTTCTGTATAGTGTTAGCTAA 62455 29 100.0 36 ............................. TGAAGAAACTTAAAAAATTATATACAGAAAAGCAAA 62520 29 100.0 36 ............................. TAAAAAGACATTGAAAATAAAGAAGAAAAAAGAAAA 62585 29 100.0 38 ............................. AAAGAAAAGAAGGTTGAAATATACCTTCTTTTTTATTT 62652 28 79.3 37 T....A..T...-..A.A........... TCTTCTTTTCATTTCCTCTTTATTCAAAGTTTTCCAG 62717 28 86.2 0 ..C..A..T......-............. | ========== ====== ====== ====== ============================= ====================================== ================== 6 29 94.2 37 ATTGACTAGTAACTTGATAAGTTTTTAAA # Left flank : CTATACCTGCTCCAGTAATGGGAGGGGTTTCAATAATATTGTTTGGAATGATTTCATCAGTAGGAGCAAGAACATTAGTAGATGCAGGATTGGATTTTTCTAACTCAAGAAATCTTATCATAGCATCATTAATATTTGTATTTGGAATAGCAGTAGATAATATTGTTATCTGGAAAACAGTTTCTCTTTCTGGGCTTGCACTTGCAGCTCTTGCAGGAGTAGTTTTAAATAAGGTTCTTCCTTTAGATAGAGAAGTAGCAATAAATAAAAAAATAGATTAATTTGAAAATCCATTGATCATGCAAAATTTATGATTGATGGATTTTTTATTTTCCAAGGGAAAAGATACCAATGAAAATTAAGTTAAGAAATAAAGATATAAATAGAAGAGAAAAATAAAAATGAAAAAATCTTTGTTTAGGTTGGAAAAATAAATATAAAGTGGTATAATTAGAGCAATGGAGAAGATAAAGGAAAAAAGAAGTTGTGAATTGATGGAG # Right flank : ATGTATTCTTTAAATATATTTTTTTGATTGAATAAATAAATTTTTAATAATGTTCTCATTATTTTTTTGTGATTCCCAACACAATTATCACATTTTTTTAACATACAAAAATATTAAATTTAATGTACGCTAATTTAATTGTCAAATTTATACGGATAAAAATTTTGTTTTAAGATTGTTTTAGAAAGAAAATTAATGTCAATAAAAAAAGAATTTTAAAAATATAAATAGTGATTATTTATAAATTAGGATGCTTAAAATTTAAAAAAATAAAAAATCGCAGATATTAAAAACATCTTTGGATAATGCAGCAGTAGAAAGTATATATGAATAGTCATGAATATATTGCTTTAGGGAAAATACTCCTGTGATAACAATTAGGAGGGATTAAAGATATAAATATTATTTAGTAGAAAGCATAATTGCTGCTGATATAAAGTATACATGATATTTCAAGGGTACTTTAATGGAGAATTTTATTTTTTATTTTAATATAATTA # Questionable array : NO Score: 2.97 # Score Detail : 1:0, 2:0, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGACTAGTAACTTGATAAGTTTTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 18596-19085 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDKT010000014.1 Fusobacterium ulcerans strain DFI.2.86 MHFABIGE_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 18596 30 100.0 36 .............................. TATCTTAATCAGGAAATTCATATACCAGAAGTGAAT 18662 30 100.0 35 .............................. CCATTGATTACATTTTCATTAAATAGTGCTGATGC 18727 30 100.0 36 .............................. AACCAATAACCAAGATTGTCTATTTTTAATTCTTTG 18793 30 100.0 37 .............................. GATGATTTTCAAATACTTCTATTTGCTTACTCAATAG 18860 30 100.0 36 .............................. TATATTTCTTTTTGGTTTCTATTACTTCATCTACAA 18926 30 90.0 34 ......T......A....A........... GCAGGACATGGATATTATAACAATGAGGCTAGTT 18990 30 90.0 37 ......T......G....A........... TCTTTTATATCTTCATTTTTAAATCCTGTTATTGCAA 19057 29 70.0 0 ......T.TC...-.CATAA.......... | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 93.8 36 ATTGAACAGTAACCTTTGGGGTTTTTAAAT # Left flank : TATAGAATTGTACTCTCCCTTTTCTCTCATCTCTCTAAATGTAGTTATTCCTATTATTGGTCTCAATTATTTTTCCTCCTCAACATCTCTTTGTTCTATTACATTCTACTATATAATATACTCTTTAGCGAAAGTTTTTACAACCTGCAATTATAAATTATCAGAAATCTCTTTTTTTAAAATATCCTGTATTTTTAAAATACTATATTTTTCATAAAAAAACAAACAAATTTTTTTACCTTTTTAAAATTTCTCTGATATAGTCTGTAAATTACAGCACAATATTCTGACATATAAAAAATAAATTAATTGTATATTCTGATAATATATCTTTTTATTTTCCAAGTTACAAATTGTATTTTATCAAATAATATTCTTTAAGATGTAATACTTTGTAACATGTTTTTTTATCTATACTTGGTTGGAAAAAATCCATTAAATATGCTATAATTAGAATGTTAAGTAAGAATAAGAAATTATTAAAGTCTGAATTTATGACC # Right flank : TGTTCCAGCAATTACAATTCCTATTCCTGTTTGATCATTGAATATCAACTGATAAGTTTTTAAATCTTAAAAGAGAAGCTTCTGTATATCTAGGTTTTGGTATTGAATATCAACTGATAAGTTTTTAAATACACACCAGAAAATAAAAGAATCCATAGAAAAATTAAATTGAATATCAACTCATAAGTTTTTAAATTATTCAAATATAAAGTGCAATGTTTCTCCTGGAATAAATTGAATATCAACTCATAAGTTTTCTCCCTTTTTCAAATAAAAAAGAGAAGAACTGGATATTAGCTCATGACATTTTGGTATATCTTCAACTTCTCTAAAATTTCAAATTCTTATTTTATTACATTCTTAATGTTAATTATTTATTATTAATTACTTATTGAATAAAATATCAAGCTCCATTAATAAGTCATTATATCTTTTTAATTCATGATTTTTTACCGGAATTAATGGATTATAAATACAATGTTGAAGCACATCTGCATCTT # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACAGTAACCTTTGGGGTTTTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //