Array 1 274406-273569 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011267.1 Geoglobus ahangari strain 234 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 274405 30 100.0 38 .............................. TCATCATCTTCCCGTACAACGAGTGCAACCTCGCGTGC 274337 30 100.0 36 .............................. GTTCGAGACGCTGAGAGACAATCAGATTAACATTGG 274271 30 100.0 37 .............................. ATCTGCTCGTGCTCCTCATAAACCGTGACATCGTATC 274204 30 100.0 39 .............................. AATAAGCTGTTCTGACTTTTATTATCTCTTTTTTGCATT 274135 30 100.0 38 .............................. TGAATAGTGAGAACTGGTATCTCGCTTATATGAAGTGT 274067 30 100.0 38 .............................. CGGAGGGAACGAGAAGACCGGCTCTGTCGTGCTGCTGA 273999 30 100.0 38 .............................. TACTTCTTCACAACATCCTTCACGGGGAACGTGTCCCC 273931 30 100.0 36 .............................. TATTCTTACCGAGCCTGCCTTTGACGTATGGGGGGA 273865 30 100.0 36 .............................. GTCAATGTCGGTGAACTTTCTCTTAATCCCTGTCGG 273799 30 100.0 37 .............................. GTGTTCTGCTCCTCTATTACGATAGATCCCCCTCCAA 273732 30 100.0 39 .............................. AAGACGAGGGTGTTTGAGAAGCTTCAGCTCATCGAGGAG 273663 30 100.0 35 .............................. GCTTTGGCACCTTCGGGGATCTCCTTATTTCGTTG 273598 30 70.0 0 ..........G.G..TTT.A..TT..A... | ========== ====== ====== ====== ============================== ======================================= ================== 13 30 97.7 37 GTTCAGGGAGAAACAAGGAGAGGGTGGAGC # Left flank : CCCAATAGAAGCCCGGCACTGCGATAGTAAGCACCCACTATTCTATTCTTCTTTCGCGGATTGTGGTGGCAGGATTTTTATTTTGCCACTCTTCCCTGCCGAAGATTCTTTGATTGCAGATCGTAGCTGGAAATGATCTCAAATGGCCGAAATCTCCCCCAAATAAAAGTCGCGTGAGGGCTGGCTCGCATGCACCACCGGGGTTTTGATGCAGTTTTACTTCTTGTGCAAAAATCATCTCCAAGACCTCTTGGAGGTGTTTGGCGCTACCGCTGACCCCTCGTAACCTATAAATACTCCCTCCACCCTATTCTACTCCGAGCCCTACCCAGTGGGAGGGCACCCGTCCGCAGGCTCCCCGGACGGTTCGATGACTCCGCCGTGGGGCTGGCGGTGACGCAGTGCGGAACCGTCCCCACACGGCGAGAGGAGGTAAAAGATGAGCTCCCTGCGGGGGGTGATGCTCGGCAGTGATAACAGGGCTGACGGAATTACTGGTG # Right flank : CATATCCTACCAAAAGTCCGTACCACCATCACATTAAGAAAAGACGTAAAAGAGCTCGCAGACAAGTTCGAACTCAACATCAGCGAAATAGCTGAGAACGCAATAATTTAGCGTGTCAGAGAGCTGCTTTTGGTTAAATACGGCTTCACATTGGAAAACACGCCGGGGGTGGGACTTGAACCCACGCGTGCCTTACGGCACACGGGCTCTCCAGGCCCGCGCAGTGCCTCTCTGCCACCCCGGCCCGCAGGTTGAATTTTCCCGGGCAGGTTTATCAAACTTTTGGTAAAAATGGAGAGCAGGTTCAGAAGACCCTGAAGGTCTCCCTGGAGACGCTGCAGAGCGGGCAGACCTCCGGAGCCTCGCCGACGAATATGTAGCCGCACGTCGGGCAGACGTAAATCTTCTCCTCAAACGCCTTGTCCCTTCCGCTCTCCACAAGAACCTTGAGCCTCCTGTAGACTTCCGCATGCTCCTTCTCCGCCTCCATCGCCCATCTG # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAGGGAGAAACAAGGAGAGGGTGGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 366578-365877 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011267.1 Geoglobus ahangari strain 234 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 366577 30 100.0 37 .............................. GAGTACAAGCAGGAGAACCAGAGCTACCTCGTCAACG 366510 30 100.0 38 .............................. CCGTTCACACCACTGGAGAAGCACGAGACGCTGAACAT 366442 30 100.0 37 .............................. CAATACAGGCTTGAAGCTTAGTTTTAGCCTCTGAAAA 366375 30 100.0 37 .............................. GAGTTCAGGTTCCTTGACGAATTCGTGACCAAGCTGA 366308 30 100.0 37 .............................. CGACGATTCCTGATGAGACCACCGCACCAACTGGAGT 366241 30 100.0 38 .............................. ACTTGACTCTGCGATGAAAAGGGTTGACACACTCGAGC 366173 30 100.0 36 .............................. ATCTTTTAAAGGCTGCTGAAGTTCTCGGGTACGTTC 366107 30 100.0 36 .............................. CTCCCTGTCGAGGGAGTTTTCAGGAACGAAGACGTA 366041 30 100.0 38 .............................. ATCACTCTGATTGGGGACGAATATGTCGCATCAGCTAT 365973 30 100.0 37 .............................. GCGAGTCGTTGAGCAGATCCTCCCCAGCCGAGTACAT 365906 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 11 30 100.0 37 GTTAAAATCAGACTAAGATAGGATTGAAAG # Left flank : TCGTTCTCCATGCCCACATTGTGGCTGAAAAGCCAGAGCTTGGTCTTGCAGACGAAGTAGTAGTTTACCTGCACTCCTCTTATGTACATTTCATCTATCATTTATCTGCAATGGTTTTTGAGAAGATAAAAGATTTTTGCTGTTAAAGAACAATTTGTGGGGTTTGGAAGAGAATGCTGCAGTTTTCAGGGTTCGGTGTCCATTTTACCATCTGCTTTTTCGTTTTACAGTCGTGCTCGTTTATGCAGCGCAGTTAATTATTTTTCGATTGGGGGATTTTTGGTTTGTTCTTAGTTCGCTTTTAGTAGTGTCTCAGAAAATTGTACAGACTCTCTGGGGCCATATAGAGCGTCATTTATTTGCGAAATACGATATAAACGCAAAGGTGCTTTCCGCAGATCTTTATATACTTCATACACCACTCAACTTTCGCTGCAGTATTTAAACTGAAAAAGGCGGGAGAAAGCGTTTTATAGGGATCGAGAGGAATATTAGCGGTA # Right flank : ACGCTCCAGCCCACTCTCCAAGCAGGGTATCAATATGTTAAACTCCACCCAGATTAAAATTTGGGAATTGTCAGAGAATAACAACCTCAAGCCCCTCTATTTTTGTGAAGTGCTTGTCTCTTGTCAGCAATCTGGCACCATGTCTTTTTGCTGTGCCTGCTATCAGAGCGTCTAAGGGCGGGATTTCAAATCCTTTTTTCTTTGATTCAGTGTAAATCTCCGCAGAGAGTCTTGCGGCTTTAGAGTCAAAGCTCAGAACTTCTACAGACTTTTCAAGTGCTTCAATAACTTTAATCTCCTTCTTTCTTTTGCCGCTGAGAAAAATCCCATGCCAGATCTCGAATAGAGATATTGAGGTTATGCAGATCTCTTCTCCCTCGATTTTGGACTCGATGTCTGATGAGCTCACATCCTCTCGGAGAATGTCAACAAGGATGTTGGTATCGAGGCATATCATTCGAGACTCCTCCTGATCTCCTCGTTAAGCTTCTTTCTTGATG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACTAAGATAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 3 432115-431004 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011267.1 Geoglobus ahangari strain 234 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 432114 30 100.0 38 .............................. GTTCTACTTAACCAACTTGTCTGGAGTGTTTGGGGCAA 432046 30 100.0 38 .............................. GCTATCTGAGATGCTCAGGATGGATGTGTCAGAGATTA 431978 30 100.0 35 .............................. GTCGCTCGGTGGGGCGATCTCCTCAACGGAGATAA 431913 30 100.0 38 .............................. CCGGCATCTTCTCGGTGAGCTTGAGCACGGCCTCTCTT 431845 30 100.0 36 .............................. TGGCCACGACCTCGGAGGTTGCCTCGAGGAGGGGGA 431779 30 100.0 40 .............................. ATGGATGGAGATAGACCGATAGTTACCTTCCTTTACGGGT 431709 30 100.0 37 .............................. TTCGAAGACCCAGACGCTGAAGTGTTGGCAAAAGAGA 431642 30 100.0 38 .............................. GCTGGAATGCGGCGTTTCTGTTCGCTATGTAGTCCGCG 431574 30 100.0 37 .............................. CGGATTTTGAGATTTCTGGAGTGTATGCTGGTATGGA 431507 30 100.0 37 .............................. ATGAGGTGGACCTGATAAGCATTAAGAGGAAGCTTGT 431440 30 100.0 38 .............................. TTGGTGCGTACCTCATAGCCTACGCGACATACAGCATA 431372 30 100.0 39 .............................. GTATATGTCAATGTATCTCTGCTAATCTTCATTTCATTT 431303 30 100.0 38 .............................. GCTGTTGCTTTCAATTTAGACTCGTCAGGAGACTACTA 431235 30 100.0 38 .............................. GTGAAAAGCGCATGGTATAGCTTCTGACCCTGCTTCGT 431167 30 100.0 38 .............................. TGAATTGATGCATTCACTTGAGCAGGATGCTGATGGTA 431099 30 100.0 36 .............................. AGAGCTCCCTCTCACGGTGACTCAGGTCTTTGTTCA 431033 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 17 30 100.0 38 GTTAAAATCAGACTAAGATAGGATTGAAAG # Left flank : AGACGAACTTTGGCTCGGAGAATATCACACCGCTCCATGCGGCGTACATGAAGACTGCCGAGAGAATCAGGTGGACCAGCGCGTAGACTGTGGTGGTCACGGAAAGAGCCATTACCCTGCTGGCAAACCTTGCGTGGAACAGGGGAAAGAGGAGGATTGTTGAGATCGTCACGATTGATATCGGAACGTGGAAGTAGATGAGCTTGTAAACGTCACCGAGCCTGTGCTCCGAGGGGAGAAAGACGACCAAGGTGAGGGTTATGCCAAATAGTGTTACCAGAACCTTGGAACGCATAATGGCAGTCATTCAGCTTGCTTTAAAATGTTTTGTAGTTTATTGAGTCCAGTAATCTGGACAGATTCGAGTCTGGGATTTCTTGTCTAATCGTTTTCCGCGCACCTTTATATACTTCATACACCACTCAACTTTCGCTGCACTATTTAAACTGAAAAAGGCGGGAGAAAGCGTTTTATAGGGATTAAGAGGAATATTAGCGGTA # Right flank : AAGATCTACGCAAGGGAGAAGAAATTCAGCACAAGCAAGTTAAAATCAGACCATGCTATTGAAAGTAAGGGATTTTGACATATATAGGCATCTCACAACGAATTAAAATTGTGTTGGGTTTTCAGAGAACCCTTAAATAGCATCGTATAACAACAATCTTTGAAGGTGTAGTGTATGGGCGAGATAACCGTCAGGCTCAAAATTCCAGACGAGATATTGAAGCAGGTGGATTTAGACAGAGTAGTCGAGAGGCTTGAGAGAGAAATCATGCTCGAGTACAACCTGAAAAAACTTCACGGAAAATTCAAAGACAAGAACCTCGAAAGGCTGCTCGAAGAGGTAGACGAGGAATGGGGGATTTGAAGGCATTTATTGATAGCAATGTAATTGTCAACCATCTTGAAGGGAAACTGGATTTGTCTGAACTCAGGAACAAATATGCCCTTTACTCAAATGCCATTGTTTTCAGCGAGGTTTTTCTCGTGTATCTGAAAGCGATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACTAAGATAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 4 586843-586470 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011267.1 Geoglobus ahangari strain 234 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 586842 30 100.0 38 .............................. CCTCTCCTTCCTTAATCTTCTTGGCAACCTCGGTGGCC 586774 30 100.0 37 .............................. TCCTGCTGGTGCTGGGCTTCATCTTCCTGAGCGTGTT 586707 30 100.0 38 .............................. CTCTCCGAAGTTGACGAGCTTTATCTCGTTGCCCGCCA 586639 30 100.0 37 .............................. ATCTCATTATAAATGTCATAGATTGTCTGCAAATCGA 586572 30 100.0 38 .............................. GTGTATGCTCCTTGTCGATCCGGGGCTGAGCTTCTCGC 586504 29 93.3 0 ......................-....C.. | C,CA,AAT [586472,586476,586484] ========== ====== ====== ====== ============================== ====================================== ================== 6 30 98.9 38 GTTAAAATCAGACTAAGATAGGATTGAAAG # Left flank : TTCTCAGACCGTTTCCAAGAGGAGCGTAATCGATGAAACCCGCCATTCCGCCGTAAATCTCAAATGACTGCCAGATAAAGCCCCTTCTGACGAGCATTTCCATAATCTGGCTCATGGGTTTTTACTCGCCCGTGTAAGATTTAAAGGTTTTCATGATTTTTCTGTGATTGTCGAGGCTCTGGTTAGGGGATCTGTGTGAGGGGTATTTGAGTTATGGCTCCTTCCTGTGACTTTGTAGACAGATTTTCCTGCTTTTCGTTTGAGTTTTCGTGGTTTATCTTTTCTGGAGTGAGGTTGTTTTGTGATATTTTATTCGTGGCTGTTATTTGCCAATTGCTTGCAAAAGTGCTTCCGCGCACCTTTATATACTCCATGCATTACTCAACTTTCGCTGCAGTATTTAAACTGAAAAAGGCGGGAGAAAGCGTTTTATAGGGATTGAGAGGAATATTATCGGTTGAAAGTTGGAACTGTGTACCCAATCGTTGCCTACTACATAA # Right flank : ACATTAAACGCTGCGATTGAATTAAATTCAGCACTGAAAATGCGGAGACAGATGAATTTGATAGGTCTTCGTCAGTTTATGGAAATCTACGACGATGTGTTCAGCCCAGTATACTTTCTGATGATGTGTGCGGTGATTGTAATTCACTATGATGTCAAGAAAACCGGAAGATTGAGAGAAGCGCTTGCGTTAACTTTTGGAGCATACTTGGTAGCTTACTCGATCTACAGCACATGGCATCTCCTACAGCCAGCTCCGCAGTGGGTTGAAGATGCACTTGCGGTAATCGGGCTCTTCTTCGCAATAGTGATAGCGGTAATTGCCCAGATGAAAGGGATCTACAACGGAGTTGTGGTTAGAGGAGCGGTCATGCTGACAATCCTGTCCATTCCTTACGTTGCAATCAGCCCTTACTGGAACATCTCCGGACATGTAGCCTATACGACAGCTCCCGCGCTTTTTCTGGTGTGGCTTGACAGAAAGTGGTGGCCAGTAATGGT # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACTAAGATAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 5 682247-682949 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011267.1 Geoglobus ahangari strain 234 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 682247 30 100.0 39 .............................. AAGGTCAGGGTGAAGTACTTCGGGATACCGGACGAGGGC 682316 30 100.0 37 .............................. GAGTAATAGGACACGTAAAGGGGCACCCTCATATGAC 682383 30 100.0 36 .............................. CGATTCCTCCAGAGCAGAACTCACTCTCCTGAATGT 682449 30 100.0 39 .............................. GTACCAATCTGGAACCAGTAGTGCTAGTCTTCTGCTGAA 682518 30 100.0 37 .............................. CTATTATTTAAAACAGCATTTTTAATAATTTTAGCAT 682585 30 100.0 37 .............................. CGAGTTTTTCAATCTCCTCCATACTTGCCGTGGAGAA 682652 30 100.0 37 .............................. CCTAACAGATAACCTACTAGTAGAAACATACGCTACA 682719 30 100.0 37 .............................. ATAATTGATTTTGGTGGTGCGGCATATCAATTCATAC 682786 30 100.0 36 .............................. ATATTCAGTATGGCAAACTCGGAAGAATGCTTGAAA 682852 30 100.0 38 .............................. TATATCTGTTGCGACGAAGTTCACGTACATGTCCACAG 682920 30 90.0 0 ..........A..........A....G... | ========== ====== ====== ====== ============================== ======================================= ================== 11 30 99.1 37 GTTAAAATCAGACTAAAATAGGATTGAAAG # Left flank : GAGCAGGACGAGCTTGAAGAGATCTACAGGAAATTCTACGACGGCTGCTACTTCATCAGGATGCAGAGGAGTGTGAGACTGAGCTACGTCAGGGGGAGCAACTTCGTGGACATCTCTGTGCATAAGGGCAGGGACAGGGTGGTTGTGGTCTCAGCAATAGACAACCTCGTGAAAGGGGCCAGCGGACAGGCCGTGCAGAACATGAACGTGATGCTCGGACTGGACGAGAGGCTGGGACTGGACTACCCGCCGCTGTTTCCTTAGGTTTTTTAATGGTTTTTTGGCGAGTCTGTCAAATTCTTTTTTAGCTGTTTTATATCCATAATTTTTCGAAGAGTGGCCTGTCAGGCTTGCTGATGTTTACAAGTTTGCATGTCTCTCTCAGGATTTTTCCGCGCACCTTTATATACTCCATGCATCACTTAACTTTCGCTGCAGTATTTAAACTGAAAAAAGCAGGAGAAAGCGTTTTATAGGGATTGGGAGGAATATTATCGGTT # Right flank : GATGGTCACGCATATTAGACTGGACTGCCGGGCAAAATTGAACCCCTTCACCGTTCTTTTCATCATATCTCTCGAAAAACAATCGCCCCTCTAAATCTCCAGCACTTATCTCTAACGTAACCATCACTTTTATATACCTCGAACTCCGATACCTCTAAGTAAGAGGTATGTTCGACAAGAAGAGCAAAGCACTGAAGAAGCTCAGGAAGGCCATAAGGTCTGGTATATACTCCTACCTGATCCTTTCCATGCTGAGGGACGGGGAGATGCATGGGTACTTTATCAGAAAGCGGCTCGAGGAGATGGGGTTTGCTCCGAGCGAGGGGGCGATGTACGACATGCTCAAAAGCTTGGAGAAGCTCGGTCTGGTGGAGGGGTTCTGGGTGATGGATAACAGGCCGAGAAAGTGCTACAGGCTCACGGACCTTGGCAGGGAGGTTCTGACTGAGCTTGAGTCTGATGTGCGGTCAATTTTGAGGGTTCTCGGAGGTGGTGAGGGT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACTAAAATAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA // Array 6 795283-796727 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011267.1 Geoglobus ahangari strain 234 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 795283 30 100.0 39 .............................. CCGTAATAGAGCTCGTCTGGGAGGCTGAGAGATTTGGTA 795352 30 100.0 36 .............................. CGGGGAGTACCTCTACAGCGGATGGAATCCGTACAA 795418 30 100.0 36 .............................. ATATTATTGAGATTGCAGAAGAGTATTTGAAGTGGT 795484 30 100.0 39 .............................. AGCCTCTATGACGTACGGTGTGATTGACTTGGCAATATC 795553 30 100.0 40 .............................. TTTGAGTCGTTGCTCTTGTTCAGCGCTGCGTGCACAACGC 795623 30 100.0 36 .............................. ATGATAAGACGATGACGATTCTCGCAGAGAGCATGA 795689 30 100.0 36 .............................. TGCACTCCGGATTGTCACAGACCCTCTCCTGACAGA 795755 30 100.0 38 .............................. TGTGTGTTACTCTACGTCGGCGGTTAAAACCATTGCCG 795823 30 100.0 37 .............................. GTTTACTTCGACAGGTACTACTTGAACGTCGAGCCGG 795890 30 100.0 36 .............................. TCTCCTCATTATCTCTTTTGCCAACACTTCAGCGTC 795956 30 100.0 37 .............................. CGTCATGTCACAGGAGGCTGACAGCTTCATGGCAGCA 796023 30 100.0 37 .............................. GATGAATGTCAGGGGCTTCCTGCTCAACGTCAAGGAC 796090 30 100.0 37 .............................. AAGAGACGGTGATGACGTGCACTACGACTTGCTACTC 796157 30 100.0 38 .............................. TGACGATGTCGAGGAGGGCGATTGCGAAGGCTATGCCG 796225 30 100.0 38 .............................. CAGAAAGAGCTGAGGTATTCGGAGATGAGAGAAGAGTT 796293 30 100.0 38 .............................. CAGCTTGTTTTTTATCTCGTCAGGAGCGTAGAGGTCGA 796361 30 100.0 38 .............................. ATAGTAATGGAAATCTGGGACTTCATATCAATGAAGGA 796429 30 100.0 38 .............................. TCCCCATCTTGGCTCGTCCCTGCTGTACTCAGCGTAGT 796497 30 100.0 37 .............................. AGATAAACGGTGCTTCGGCTACGTTCAACGTCGAGAG 796564 30 100.0 38 .............................. CCGGTATCATCGTTCATGGCAAGGTAAACGAAGACTGG 796632 30 100.0 36 .............................. GCAAGTGGTGCTGCAATAACTGCTGATTACAAGTTT 796698 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 22 30 100.0 37 GTTAAAATCAGACTAAAATAGGATTGAAAG # Left flank : CGCTCTGACTGGTGGAAGGGCAACGGCCGAGGAGCAGAGGAGGCTTGGTGGACAGCCGGAGAAGTGCGTGATCTTCGAGCTCTACACGATACACCTGCTGGACGACAGGGAGCTCGAGGAGGTTGAGGGGGACTGCAGGGAGGGCAGGCTCCTCTGCGGGAAGTGCAAGAAGATGGCAGTGGAGAGGGTAGAGAGCTTCCTCAGAGAGCTTCAGGAGAGAATGGACGAGGTGGAGGGCAGGCTGGATATGTACAATATAATCTCGTAGTTTGTATTTTTCTTTCGTCAATCTGCAGAACCTGTGAGGTTTGTTTACGGTCTTTGCAGATGGATTTGCAGGGCTGTGGTGTTTTATTTTCTGACATTGTCTCTTCTCAGGTTATGGTGGGTCTCCGCGCACCTTTATATACTCCATGCATTACTCAACTTTCGCTGCAGTATTTAAACTGAAAAAGGCGGGAGAAAGCGTTTTATAGGGATTGGGAGGAATATTAGTGGTA # Right flank : GAGGAAGCTGAGGAGGAGAAGCAAAAGCAGATTGAACAGGTTAAAATCAGACTAAGGTGTTGCATCCTCAATTGTAAAGATTCGACCCTCAAAGTACGGACTTCACCCCTAAAACTCATGACAAAACCTTTATCACCCTCGTTCTCTTTACAAACTTCCTAATCTGAACTTGAACAGGAATTGTTGTCACTGGCCGCTTGGCTCTATGGAGTGGGTGGATGTGGTGCTGGTAGACACGTTTCCGGCATTTCTGGAGCGCTGGAATGGCGATGAAGAAAGCTGGCTCGAGTACATCAGGGACTTTCCCGAGCTTTTCGAGAAAATCAGGATGGATTACGAAAAATACGGGAACGACTGGAGGGATTACCTCAGGCTTCTAAGCAAGAGGGAGTTGCCAGAGCTGAAAAGGGCACACGAACGTCTTGTGGAGGCCATTCCGGAAGTTGGGGTGAGGATTGAGGAGCTTTTTTGTGTTGAGCAGGAGGATTACAATATTGTGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACTAAAATAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 7 1166413-1166996 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011267.1 Geoglobus ahangari strain 234 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================= ================== 1166413 24 100.0 35 ........................ CACGAGAGACCCGAATATATGCGTCGTTGGGATAT 1166472 24 100.0 41 ........................ ACATCCTCGTAAGCAGAAGTCCGTAGTATATCATGTGCTCC 1166537 24 100.0 34 ........................ TTAACAACATCTGTCATCTCTTTCACCTCGCAAA 1166595 24 100.0 38 ........................ AAAATCCACTCTGTCTGCACGCACTATCGTTTCCCTAA 1166657 24 100.0 37 ........................ GTAATAGCACATGTGTATCTTTTTGTGTTCTCACCAA 1166718 24 100.0 39 ........................ TTATTATGTCCGGGTCTTCAAGCATTTCAACTGGTTCAA 1166781 24 100.0 39 ........................ GCTGATGGCCACGGACATTTACTCGTTAGTGAGAGCACG 1166844 24 100.0 41 ........................ CCCACGTAGCTCCACTTATTGTTCCATTATTACCATTTCCG 1166909 24 95.8 40 .......................T TTTCCAGCGAACGCCTCATAATCCTTTTTGGCCAGCCTTA 1166973 24 83.3 0 .G........A........A.C.. | ========== ====== ====== ====== ======================== ========================================= ================== 10 24 97.9 38 GAATCTCATAGGGAGAACGGAAAC # Left flank : AGAAAATTGTTTGTGTGGACTGGGCCATTACTCATTTTTAGGTTGTGGGCTGCTGAAAGTTATCTGAAACCAAGCGCGTGTATCTGGAAAGCAGCCCAACAATGATTTTCCACAGGAAGTCAAATTGGTCTCATCTCAAAAAGACAAACAAATGGTGTGGGGCACTTAACACACTGAGCTCTGGTAGTATTTTAAATATAGCTGGGATTTATTATTCTTAAACTGAGTAAATTAAACTTGTTTTATGGTAAAAACTATCTGATTTTCCAGACGAATAAAAATTCACGTAGTTAATGGATTGAATTTGCGAATTCCCACGTCCCCTAACTCTGCAATTAGGCTCCCTCTCCCAAAACTCCCAAGTATCTCTCCTGAGAAAGCCTTTCAAAAATTGGCTGCTCTTTAAATACTCACGCCCAAAATTGCATGCAACCAATCACCCCTGAAAAAAGCGGGTGGGAAAAAGGTTATAAATGGGCAAAGGAGAAATTTGAACATCG # Right flank : CCCCCCAACTTCTCGAAAATTATCGCAGAAAGAGTCAGAATGTGGGCATTGACGTGAGAAAGGGGGAAATGCCTCTCCTGTCGAAGGCAGGTCGGAATTGTGTGGTTGTGGGTTGATGTTTACGAAAGGGTGGGAAAATTATCGGAGTGTAAACTCCGGAAATTTTATCAAATCTGTCTGGAATATGCAGAAAGGAGGTTTTTAGGATGAAGGTGGCGGTTATAGCACCACTTGGAATGAGCCCTCCGGTGATTACGGCTTTTGTGCACCACATACGGGATGTGAGGGACTTGGTCGTCATAACTACGGCTGATGACAGGGTTAAGCAGGGATTTGAGCTTGTGAAAGTTGCTATGAAGGTCAAATATCCGAAAACAAGGGTTCATGAAGTTGAAGTTCCCTTCGAGGACATCACCACTGAGGAGCAAAACTTTGAATTCATGAGGATTGCGGGAAGGACGATAAAGAGGCAGAAAGAAAAATTTGGCTCTGATGTGGTG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATCTCATAGGGAGAACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //