Array 1 216-4 **** Predicted by CRISPRDetect 2.4 *** >NZ_UIUN01000308.1 Klebsiella pneumoniae strain EuSCAPE_GR119, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 215 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 154 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 93 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 32 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : G # Right flank : GTGC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [1.7-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 222160-218293 **** Predicted by CRISPRDetect 2.4 *** >NZ_UIUN01000001.1 Klebsiella pneumoniae strain EuSCAPE_GR119, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 222159 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 222100 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 222039 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 221978 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 221917 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 221856 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 221795 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 221734 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 221673 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 221612 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 221551 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 221490 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 221429 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 221368 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 221307 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 221246 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 221185 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 221124 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 221063 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 221002 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 220941 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 220880 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 220819 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 220758 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 220697 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 220636 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 220575 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 220514 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 220453 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 220392 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 220331 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 220270 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 220209 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 220148 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 220087 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 220026 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 219965 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 219904 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 219843 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 219782 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 219721 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 219660 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 219599 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 219538 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 219477 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 219416 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 219355 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 219294 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 219233 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 219172 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 219111 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 219050 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 218989 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 218928 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 218867 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 218806 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 218745 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 218684 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 218623 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 218562 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 218501 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 218440 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 218379 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 218321 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 64 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //