Array 1 3009-995 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTTC01000008.1 Escherichia sp. MOD1-EC5110 MOD1-EC5110_8_length_171774_cov_45.6322, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3008 28 100.0 33 ............................ ATCTGGAGGCGGTTACTCTGTCCGCGTCCACGA 2947 28 100.0 32 ............................ TCCGCGCTTGTTATAATCCACATCAAGATCGA 2887 28 100.0 32 ............................ AATAGGGCTGAGCAAAGCCTCCAAGCTGTCCA 2827 28 100.0 32 ............................ GAGGGAATACGGGGAAACGCGGTAACACCTGT 2767 28 100.0 33 ............................ GCAATGCGCGTCGCATGTGGCGGTGGTGGGCAG 2706 28 100.0 32 ............................ GTTGTGCCCCAAGTCTGAAGGGGCGTTATGTT 2646 28 100.0 32 ............................ CCATCCTGATGATGGATGTGGCACAGGGGAAT 2586 28 100.0 32 ............................ ACGATGTGATAAAACTCATTACTCCCTGTGCA 2526 28 100.0 32 ............................ ACTTGTTCAGCTCACATAAAGCTGGCGAGCCG 2466 28 100.0 32 ............................ AGCATCCTGTGCCACTGACGCCATCGTTTCAG 2406 28 100.0 32 ............................ ACTCAGGGTGCCGCTGTGCAAAGCATAATAAA 2346 28 100.0 32 ............................ AGTTTCAGTAGCTCAGCCTCAATCCTCCCCGC 2286 28 100.0 32 ............................ TGTCGTTTCGTGAGAACGTCTACGACGTAGAA 2226 28 100.0 32 ............................ GCTAGCAGTGACAACGTAAACGCCGGGCAGGA 2166 28 100.0 32 ............................ GCAACGGCTTCGGGCAGGTCGTGCGCCTGTAC 2106 28 100.0 32 ............................ CCTCAATCGAAAACACGCCGTTACCGTGGTTT 2046 28 100.0 32 ............................ CGGATTTCTGCGCGAAGATTTTTAATTGCTGC 1986 28 100.0 32 ............................ AACAAACGGCGTTTCATAAACCCGCCCGGCGT 1926 28 100.0 32 ............................ AGCAACAAAAAACCTGATGACCGGATGACACA 1866 28 100.0 32 ............................ GCGCCACCCAGGTGGCCCGACACCGATTGAAT 1806 28 100.0 32 ............................ CACATATCTGATTAAATATCACGACACGGCGA 1746 28 100.0 33 ............................ ACTTCCATGTGGCGGTTTTGCCACATCCATAGT 1685 28 100.0 32 ............................ ATCATAAGCAGGTGTTACGCGTCTCCTACAAA 1625 28 100.0 33 ............................ AAAAATTACACACGTAAAACTATCGGGAACGCA 1564 28 100.0 32 ............................ CAGCGCAGCACCGGCACAAAAACGCATTGCGC 1504 28 100.0 32 ............................ ACTGCTGGCCCGACTGTAGACGGGCGGGAAAT 1444 28 100.0 32 ............................ ATTTCATTGATAAAGGAGTTATAGGCGACTTC 1384 28 100.0 32 ............................ GAAATGATGAGTCGAGGACGGCGACATCATCA 1324 28 100.0 32 ............................ ACGGGCGCGGCGGCAGAGTGTCCGATTAAATA 1264 28 100.0 32 ............................ AGTTCTCGACTGATGCAACTCATTGCCCCCTC 1204 28 100.0 33 ............................ GACAGCAAATCACCGCGTAACCAGATTTGACGA 1143 28 100.0 32 ............................ TGTACCAGCACTTGTCGCAGCGGGTGCTACGG 1083 28 100.0 32 ............................ GCACTTATGGCGAGTAACAAAGGTTGAAATGT 1023 28 92.9 0 ....................T...C... | C [1000] ========== ====== ====== ====== ============================ ================================= ================== 34 28 99.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GAGTTGCAGGTTCAACTGGATCAGAAAGGTGTTTCTCTGGAAGTGAGCCAGGAAGCACGTAACTGGCTGGCTGAGAAAGGTTACGACCGGGCAATGGGCGCACGTCCGATGGCTCGCGTCATCCAGGACAACCTGAAGAAACCGCTCGCTAACGAACTGCTGTTTGGCTCGCTGGTGGATGGCGGTCAGGTCACTGTTGCGCTGGATAAAGAGAAAAATGAGCTGACCTACGGGTTCCAGAGTGCACAAAAGCACAAAGCGGAAGCAGCGCATTAATCTGGGGTCGTGAAGCCTTTTAAGTAGGTTGATAAAGTCCGTAATCTCGTAAGAGGTTACGGATTTTTTTGTTTGTGAGGTGGGGCGGTAAAAACCCTATTTTTGAGGGCGAAGGTAAGTTATTGATAATTAATGCTGCTGGAAGGCAAGGATAAAAAAGGGGCTGGACAAGGAATTTTGCTGGTTTCGCTTTATTAACAATGGGCTAAGCGTGTAGTATTTGA # Right flank : TACGATGATGGCAGAAATTTAGCTGCGTTATGGCGCTCTCAACTCCGAACCATTAGCTGTGACACACAATAACAATTGTGATAATTGCGACGAGAATCAATTTCTCACACAGAAATCAATGCTGTACTAATCCTAACTCCTTCAAATAAAAATAATCACAGGATGTGTTTATGTCTTCAAATTACCTTACTCCTTCTGATCTCAAAACCATTCTCCACTCCAGGCGTGCCAATATTTATTATCTGGAAAAATGCCGGGTGCAGGTGAATGGTGGGCGAGTGGAGTATGTCACCAGTGAAGGCAAGGGGTCGTATTACTGGAATATCCCCATTGCGAATACCACGGCGTTGATGTTGGGGATGGGAACGTCCGTTACCCAGGCGGCGATGCGTGAATTTGCCCATGCTGGAGTGATGGTGGGTTTTTGTGGTACGGATGGCACGCCGCTGTATTCGGCAAATGAAGTTGATGTTGATGTCTCCTGGCTCAGTCCGCAAAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //