Array 1 1510-1053 **** Predicted by CRISPRDetect 2.4 *** >NZ_UXFR01000001.1 Flavobacterium psychrophilum isolate 69-SE565_S22_R1.fastq.gz, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================================== ========================== ================== 1509 43 100.0 26 ........................................... CTCTGCAAAAGACCCATCTCCAATAG 1440 43 100.0 26 ........................................... ATCTGCAAAAGCCTCATCTCCAATAG 1371 43 100.0 26 ........................................... ACTGAAAAAAGCACCATTTTCAATAT 1302 43 97.7 26 C.......................................... ATCTGCAAAAGCATTCTCTCGAATAG 1233 43 100.0 26 ........................................... ACCGGCAAAAGCACCTCGATTAATAG 1164 43 95.3 26 ..A....................................G... ATCTGCAAAAACATAATCTCCAATAG 1095 43 81.4 0 ...................G..G..C.........TT.TTG.. | ========== ====== ====== ====== =========================================== ========================== ================== 7 43 96.3 26 TAGTCACAGAATTAGGAATTGTAACTGATGTTAAACCAGAACA # Left flank : CATTTGTAATA # Right flank : TTGTACAAAAGCAGATTCTCCAATAGCAGTCACAATATAGTTTTTTGAATTATAAGTTACTATTTCTGGTATTTCTGCTGCTCCAGTAAAATTAGCGTTTCTAGCTACCTTAACAGTAAAAGGAGCTGTTGAAGAAGTAACAGTATATTTTATACGGTTTGCTGTAAAAGTTTGTGCTATTCCTAAAAAAGGAATTAAAATGACAAATAATAATTTTCTCATGTTTTTTGTTTTTAATTATTGTATAATGATTGTTTTTGTTGCCTTACCTTGGTTTGTCATTACTTCTACAAAGTAATTTCCTTTTGCAAAGCTTGAAACGTTTATTTCTGAATGATTAGTTGTTTTTATTAACTGCCCTAATGTGTTGTAAAAATTCACTTTTTCTAATTGTAAGCCCTCTTGTAAGGTTATGTTTAAAATTTCTGAAACAGGGTTTGGGTATATTTTTAAAGCACTTTCTATCGCAAATGAATGATTAGAAAGTAAACTACCAGAAA # Questionable array : NO Score: 2.62 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.24, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAGTCACAGAATTAGGAATTGTAACTGATGTTAAACCAGAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.18%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 309-833 **** Predicted by CRISPRDetect 2.4 *** >NZ_UXFR01000118.1 Flavobacterium psychrophilum isolate 69-SE565_S22_R1.fastq.gz, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================================== =========================== ================== 309 42 97.6 27 ............................G............. ACTGAAAAAAGCACCATCTTCAATATC 378 42 100.0 27 .......................................... AGCTGAAAAAACACCCCTTCTAATAGT 447 42 95.2 27 ...T...................T.................. GCCTGCAAAAGACCCTTCTCCGATAGT 516 42 97.6 27 ............................G............. CTCTGCAAAAGACCCATCTCCAATAGT 585 42 97.6 27 ............................G............. ACTGAGAAAAGCACCATCTTCAATATC 654 42 100.0 27 .......................................... AGCTGAAAAAGCCCCATCTCCAATAGT 723 42 100.0 27 .......................................... GCCTACAAAAGCATACCTTCCAATAGA 792 42 85.7 0 ............................G.....TT.TTG.. | ========== ====== ====== ====== ========================================== =========================== ================== 8 42 96.7 27 AGTCACAGAATTAGGAATTGTAACTGATATTAAACCAGAACA # Left flank : ACTTTTTCTAATTGTAAGCCCTCTTGCAAGGCTATGTTTAAAATTTCTGACACTGGGTTTGGGTATATTTTTAAAGCACTTTCTATTGCAAATGAATGATTAGAAAGTAAACCACCAGAAATAGGGCTGAAATTTCTCCAAACCGCGGCTGCCTGATAAGCGACTTGCGTACCAGTAGGAACATTTAAAGCACAGTTTGATTGAGTAATATTGCCGAAGACATTTGCATTAATAACTAAAGGGCTTGTAATATGGCAATTTACTGTCTTTAAACTTCTACAGCCTGCAAAAGCATCCTTTCCAATAGCA # Right flank : ATATTCAAAAGCAGATTCTCCAATAGCAGTCACGGCGTAGTTTTCCGAATTATAAGCTACTGTTTCTGGTATTTCTGCTGCTCCAGTAAAATTAGCGTTTCTAGCTACCTTAACAGTAAAAGGAGCTGTT # Questionable array : NO Score: 2.66 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.12, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTCACAGAATTAGGAATTGTAACTGATATTAAACCAGAACA # Alternate repeat : AGTCACAGAATTAGGAATTGTAACTGATGTTAAACCAGAACA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.10,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 471-304 **** Predicted by CRISPRDetect 2.4 *** >NZ_UXFR01000089.1 Flavobacterium psychrophilum isolate 69-SE565_S22_R1.fastq.gz, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 470 29 100.0 40 ............................. CCGATGTTAAACCAAAACAGCCAAAAAAAGCAAAATTTTC 401 29 96.6 40 ........................T.... CTGATATTAAACCAGAACAGCCTGCAAAAATACCCCTTCT 332 29 96.6 0 ....A........................ | ========== ====== ====== ====== ============================= ======================================== ================== 3 29 97.7 40 AATAGCAGTCACAGAATTAGGAATGGTAA # Left flank : TTCATATAAAAAATAATAATTTTTTCATGTTTTTTGTTTTTAATTATTGTATAATAATTGTTTTTGTTGCCTTACCTTGGTTTGTGATTACTTCTACAAAGTAATTTCCTTTTGCAAAGCTTGAAACATTTATTTCTGAATGATTAGTTGTTTTTATTAACTGCCCTAATGTGTTGTAAAAATTCACTTTTTCTAATTGTAAGCCCTCTTGTAAGGCTATGTTTAAAATTTCTGAAACAGGGTTTGGGTATATTTTTAAAGCACTTTCTATTGCAAATGAATGATTAGAAAGTAAACCACCAGAAATAGGGCTGAAATTTCTCCAAACCGCGGCTGCCTGATAAGCGACTTGCGTACCAGTAGGAACATTTAAAGCACAGTTTGATTGAGTAACATTACCGAAGACATTTGCATTAATAACTAAAGGGCTTGTAATATGACAATTTACTGTTCTTAAACTGCTACAGTCTGCAAAAGCACGCTCTT # Right flank : ATCGATGTTAGACCAGAACATTTTTCAAAAGCAGCATCTCCGATAGATGTAACGGTATTGTTAGGGATTGTAATTGATGTTAAATTAGAACAAAGCGCAAAAGCATCCTTTTCGATAGATCTAACAGAATTCCCAACGTTAACCGACGTTAAACCTTGACAGGTAAAAAACGCAGATTCTCCAATAGCAGTCACAATATAGTTTTTTGAATTATAAGTTACTATTTCTGGTATTTCTGCTGCTCCAGTAAAATTAGCGTTTCTAGCTACCTTAACAGTAAAAGGAGCTGTTGAAGAAGTAACAG # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATAGCAGTCACAGAATTAGGAATGGTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //