Array 1 254-1890 **** Predicted by CRISPRDetect 2.4 *** >NZ_UXES01000050.1 Flavobacterium psychrophilum isolate 23-SE091_S9_R1.fastq.gz, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 254 46 69.6 29 TAAT.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG 329 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 405 46 100.0 30 .............................................. AGGACGATTATAAATTTATGCTAAATATTA 481 46 100.0 30 .............................................. AGCGATGGAAAATGCGCACGAGCTTACGCT 557 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 633 46 100.0 30 .............................................. AAAAACAATATCGAAAAACTGAAAGAGAAT 709 46 100.0 30 .............................................. ATTTAATGTAATTGTACCCGAACCAGCTCC 785 46 100.0 30 .............................................. TATATCCGTGTTTGAATACACATTGCCACC 861 46 100.0 29 .............................................. CGTTTTCGCACGTGAAATCAAAGTACTAT 936 46 100.0 30 .............................................. TTTTAAAAAATGGTTAAGTAGGAAAACTTA 1012 46 100.0 30 .............................................. TCCAGTAAGCGAGATGTCGTATATCAAAGT 1088 46 100.0 30 .............................................. AGCCAATGCCTTGTGTCCTGTTATGTGTTC 1164 46 100.0 30 .............................................. AAAAGATTTAGCAACATAGATGATTGTTTT 1240 46 100.0 29 .............................................. TTGTACTTTTTACTTAAAGCAACTGTAAT 1315 46 100.0 30 .............................................. TAATAATTTGCTCGTTGCCGTTTATTCCGT 1391 46 100.0 30 .............................................. AGTAGGTAATGTATTCAAAATAGACACATT 1467 46 100.0 29 .............................................. AAAACGAAATACATACAGCGCACGCATTC 1542 46 97.8 30 ............................C................. AGGCACTTCTTTAGACTTAAATAAGTCTTT 1618 46 100.0 29 .............................................. AGTAATAGATGGGGGGTTTGAATGCCGTA 1693 46 100.0 30 .............................................. TCATCATCTGATGAAAATTGCTGTTCAATA 1769 46 100.0 30 .............................................. AAGCAAAATAAAATAAAAGAAATATTTAGC 1845 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 22 46 98.5 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : ACAAATTTAATAGAAAATTTAAAAGAAAAAATTAGAAAATACACTAAAAATAAAATGTCATTCCCTACTGATGATGCGGTTCTAAAATCAGTTTATTTAGCTTTAAAAGAAGCAACAAAAAAATGGTCAATGCCAATACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCATCAAAT # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTATGTACTTCGGCATTTTCTCTGCTGGCACAAAATCGTATATAGATCGAAAACTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTAGGTAAGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //