Array 1 153065-145287 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011393.1 Fervidobacterium pennivorans strain DYC chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================= ================== 153064 30 100.0 44 .............................. TTCCACGATGTTTTCTCCATCAGAAGCGTACAATCTATTTGCTT 152990 30 100.0 41 .............................. TGTTACCTTTGATTATTACCTTCTTCAACACTTCGATTCCC 152919 30 100.0 39 .............................. TGGTGGTGCCTTGGTAGGCACCACCGTTTACACTAATAG 152850 30 100.0 42 .............................. ATGCCGGGCGATGTGTGATAGCCCGGCAGGGCATCAAGAAAA 152778 30 100.0 42 .............................. TTTCCACTAGGGGGGTATCTTTCTCCCCGGCTGATAACCGCA 152706 30 100.0 41 .............................. CCTCCGGCTTGGTTTTATAAATTTGCCCTTCTTTAAACTAA 152635 30 100.0 43 .............................. ACCCTTCTTTTCTTTACCGTTTACTAACACGTACACCTCTACG 152562 30 100.0 38 .............................. TGGCTGGGCTTTATAAACTTGCCCTTCTTTAAAGAAAA 152494 30 100.0 41 .............................. TGTGTTAAACCTTTGATGCTAAAGGTTCCTAATTCAATCGT 152423 30 100.0 39 .............................. TCTCCAATTTCCACCCCCAAAACTCTTCCGTTATTTTCC 152354 30 100.0 42 .............................. ACTGGACTGACAGCTCAAACCTTCCTCCAACTACCATACTTT 152282 30 100.0 39 .............................. CCTCCGCGGTGTTGTGCGATATTCTATCCCGTATCTTTC 152213 30 100.0 41 .............................. TTCTTACCATTTCACTAGCTCTAACAATCTTAATTATTTTA 152142 30 100.0 36 .............................. TTTTTACCAAAACAAAATAAAGATTTTTCAATAATA 152076 30 100.0 38 .............................. GTTTGCCCTCGCAATTCTTAATTAGTTCCTCAACGTTC 152008 30 100.0 42 .............................. CAACCGCAGATACCTGCCGGGCAGCAGGTGGTACTCATACCA 151936 30 100.0 42 .............................. TGAAAAAAGGAATGGGGAGGTGTTGGGAGCGGAAATTGGAGA 151864 30 100.0 44 .............................. GCAGTGCATCTGTTACCTCGTGTTGTTCACGAGCAATTTTCTGA 151790 30 100.0 42 .............................. GCACCACCGTTAAGTGTAATGACCGTCTTTTTTTCCATATTC 151718 30 100.0 40 .............................. GGCACCACCGTTGACCCTGATAATATTACCCATATTTCCC 151648 30 100.0 41 .............................. CCACCATTAACCACCGTATTTACCATACCTCTATTTTCCAT 151577 30 100.0 41 .............................. CCCAGCCGCTGGCTGGGCTTGATAAACTTCTTCTTTTTTGG 151506 30 100.0 42 .............................. TCATTCACAATTATAAATAGTTTGCCACCCACTACTGGATTC 151434 30 100.0 41 .............................. ATGATAGCCCGGTAGGGCATTAAGGAAATCGATTACGATTT 151363 30 100.0 34 .............................. TTTTAGTTTTTTTATTTTTTGGCCGGGTGCGGCA 151299 30 100.0 42 .............................. CCACCATCGACTGTAACAACAACCATATCTCCCATATCCTCC 151227 30 100.0 43 .............................. CTTTGACCCTTCAACCAGATTTAAGATTTCTTGTCTGTTTTCT 151154 30 100.0 39 .............................. TAGCCCGGCAGGGCATTAAGGAAATCATTGAGGATTTCC 151085 30 100.0 41 .............................. TGGAAACACAACAACCAGCCATACGTGATCCGGAATGTGTA 151014 30 100.0 40 .............................. GTGTTCGTTGTTCCTTGATATATCGCTCCCCTTAGCACGA 150944 30 100.0 40 .............................. CAACTCGACCGCTTCAATAACCCATATCTTATCAATCCTC 150874 30 100.0 41 .............................. CCAAAAGGTCGCCGGCATAATCCACCAACTCGACCGCTTCA 150803 30 100.0 40 .............................. ATCCTGGGATTGCTTTCATAAAATCTTCAACTATAATCAA 150733 30 100.0 42 .............................. GGAACCTCATGGTATCCTGGGATTGCTTTCATAAAATCTTCA 150661 30 100.0 44 .............................. CACTGTTAACTCGGTGGATGGATCCCCCTTGCTCCAATAACTAA 150587 30 100.0 41 .............................. TAATACCCGGGTCCTAAAAAATACTCATACCAGCCCGAGAC 150516 30 100.0 40 .............................. CTTTTACCAGTTCGATGGCCAGCTCTGACGCTGGTTCCCT 150446 30 100.0 40 .............................. TACACTGCCGGGAGCAAGTGGTATTCAAACCACCCGCTGA 150376 30 100.0 38 .............................. TTATCGGGTTCATGTCCGTTTTGCATCAATAAAACTGT 150308 30 100.0 39 .............................. TGCTCTTTTCGACCAATAATCATAGCTAACCCTTAGATA 150239 30 100.0 39 .............................. CTGATGCCCCCCTACTTTTTTTTAAAAAAAAACAAAAGA 150170 30 100.0 43 .............................. CACATTCCGAAGCTTTCTTTGATTGGTTGTGCCTTGATAGACA 150097 30 100.0 36 .............................. TGTTGTTCGATATTCGATCCCGAACTTTTCTAAAAA 150031 30 100.0 44 .............................. TGGTGATTGTGGTAACTAATTTGCTGCAATGTAAGATTGACACC 149957 30 100.0 39 .............................. GTTTGAGTTCACCGCCTTTGATCATTTCCAAAAAGTCGT 149888 30 100.0 45 .............................. GAACGAATACTGCAATTATGTCATCGTCTTCTGCCACATAATTGA 149813 30 100.0 44 .............................. CCGTCCCCGCGCTTGACGGCTTTAAGCACGTCTGATAGCGTCAT 149739 30 100.0 40 .............................. GCCTAAAGCCGAGTCCCCCGCAATCGAATCGTTCGAGTTC 149669 30 100.0 40 .............................. TTTTTTACTATCACATTTTAATTTGACGCTCTTAATAACT 149599 30 100.0 38 .............................. AAGACGTTCAGTGGTGCAATCTCTTCTCCTACTATCTC 149531 30 100.0 41 .............................. GTCTGTAATAACCGTCAGCTGCCCAAGTAGCGAGTCTGTTA 149460 30 100.0 36 .............................. TTTTGAAGAGTTTCAAAAACATCTTCTTTACCCATA 149394 30 100.0 42 .............................. TCGCTATCTGTATCTGTTGTTTGTTCAAAGGTGTAATTGTTC 149322 30 100.0 41 .............................. GGACCCCTCCCCCAGCGGGAGCAACTAAGCATATCACCACC 149251 30 100.0 40 .............................. TACCTCCTACTCAACACCACCATTACGAGGTTACTATACC 149181 30 100.0 41 .............................. CAATTCGAACTTCCTTTAATCCTTCCACACTACCATCCTCA 149110 30 100.0 40 .............................. CATTCTTCCGCTTCAAAAATATTGTCAAATATGATGGCTA 149040 30 100.0 39 .............................. CTCTCGAAACTTCTTTTACATCAATCGTGCCAACAAAAG 148971 30 100.0 36 .............................. CAATGATCTCGTCTTTGTTATCACATTTTATTTTCA 148905 30 100.0 36 .............................. CCTCACCGTTCTCGAATGCCCTCATTACTTCCATCA 148839 30 100.0 39 .............................. CAAAATTTTGACTTTTCAATTCTTACTACTTCATTTTCA 148770 30 100.0 44 .............................. TTGCGATGTCTGCGATTTTCTTTAATACTTCCATAATTTCTCAC 148696 30 100.0 44 .............................. CCGCCGCGTGGGGGAGTCCACCTCCTTTTTTATTTTTGTTTTAG 148622 30 100.0 42 .............................. GGGGGTGCACCTCCTTTTCTTTTTTTATTTTTTTGCCAGGTG 148550 30 100.0 37 .............................. CCTGCCGCCGCGTGGGGGAGTCCACCTCCTTTTTTTA 148483 30 100.0 41 .............................. CTCACAAAAGCAAATAAATCAAAAACCTGGCAATCACTATA 148412 30 100.0 40 .............................. CAAGAATTTTAATAATTTCATGTTTATTATTACATCTTAT 148342 30 100.0 41 .............................. ACTTTGATAAAGAAATAACGCCCTGGGAATTGCTTAAGTTC 148271 30 100.0 41 .............................. CGGCCGAAAGTTTTCGAATGTTCGTTGACCCCTGATATTTG 148200 30 100.0 44 .............................. TCGAACTCCTCAAGCCATTGCCGCGTTCATCGATGTAGTCGTAG 148126 30 100.0 44 .............................. ACGCAGTACCTGAGGTAGTCCTTCGGCGCTTGCTCGCCATATCG 148052 30 100.0 34 .............................. TGATAGTAACTTCCGTTAACAACTACCATATCCT 147988 30 100.0 42 .............................. CCTTTTTTTTATTTTTTTTGGCCAGGTGCGGCAGAGACCTGG 147916 30 100.0 45 .............................. TAGTTGCGCATTGTTTCATAGGTTGCATCTGAAAGTATGATTATC 147841 30 100.0 41 .............................. TGGTCGATCTCCTCGGGCGTTAACCCGAGGAGTATTAGTTT 147770 30 100.0 40 .............................. TCATAGGTTGCATCTGAAAGTATGATTATCAGCTCCGTAT 147700 30 100.0 43 .............................. AAAACATTGGAACAAAAAAATTCCGTCCCACAATAAACGCTCC 147627 30 100.0 39 .............................. TGTCAAAAGTTCTTCTTTGTTCACCATACTATCTACCTC 147558 30 100.0 43 .............................. AGTCCCACTATCCCAGGAACCTCGTGGTATCCTGGGATCACAT 147485 30 100.0 42 .............................. GTTGTGCCTTGGTAGGCACAACCATTAATTGTAATGACGTTA 147413 30 100.0 40 .............................. CGTATGTTCCTGAAATGTACACTTCTGTTCCGATGATTTT 147343 30 100.0 42 .............................. TGTTCACTAATGCGTTTTCTTGTGGCAGTTTTATCTCTTTTA 147271 30 100.0 39 .............................. ACTGAGAGTGAACGCAAGAACTCAGCAGGTTTATCCACA 147202 30 100.0 34 .............................. CCTCCTTCTTCTTCTCTTTTTTTTTGCCAGGTGC 147138 30 100.0 42 .............................. CCGGGGGCCCCACTCAGGGGTTCACAAAAATACGAAACTTCC 147066 30 100.0 41 .............................. TCCGGCTGGGCTTAATAAATTTCCTTCTGCTTAAACTAAAC 146995 30 100.0 39 .............................. ATTTTCTCCCCCCCCACGCCTGCCGCCGCGTGGGGGTGC 146926 30 100.0 43 .............................. CCCAAAAAATCCACAATGATTTCTTTACATTTTCCACACTTTT 146853 30 100.0 43 .............................. TCAACTTTTACTAATTCAATCATCAGTTCACTAGATGGCTCCC 146780 30 100.0 43 .............................. TGTGAAAACCATACCTCAAGTTTCAACCATTTTCTGTCAATCG 146707 30 100.0 40 .............................. CATACGCTGGGACCGCTCCCCCAGCGGAAGCAACTAAACA 146637 30 100.0 39 .............................. TTAAACACATGACAATCCTCATAAATTTTCCTTGACAGC 146568 30 100.0 36 .............................. TTATCTTCAGCTGTTTCAAAATTTCAATTGCTTGGG 146502 30 100.0 40 .............................. TATTCGATCCCGAACCTTTCTAAAAACCGTAATTCCCTCG 146432 30 100.0 39 .............................. CAAAAATACGAAACTTCCACCGGAAGATCGTATTTGTTC 146363 30 100.0 37 .............................. TTTTGCTCAGCAGCCACGTTTTCAAGAACTTCGAAAA 146296 30 100.0 42 .............................. CTATTATTTCTTTAATTCTTCCACCACCGTACCTTTCGATAA 146224 30 100.0 39 .............................. CTTCACTTAATGTTTTATTGTTAAATTTACTTATAAACT 146155 30 100.0 41 .............................. CGGGAACCATCAACAACTCTTACCAATTCGATCACCAATTC 146084 30 100.0 40 .............................. CCCGGCAACAGGGTGTATTCATACCACCCTGCCACCCTGT 146014 30 100.0 42 .............................. TGATTGGTTGTGCCTTGGTAGGCACAACCGTTGACTGTAACA 145942 30 100.0 42 .............................. TAAAGCCGAGTCCCCCGCAATCGAATCGTTCGAGATCGTCAG 145870 30 100.0 37 .............................. GTACCCGGGGACTAGGTCCAAGAAATCCTTCAATATT 145803 30 100.0 40 .............................. TTTAGAAAATCTACTATTATCATCGCGATTCCATACCTTT 145733 30 100.0 40 .............................. TTTAGAAAATCTACTATTATCATCGCGATTCCATACCTTT 145663 30 100.0 39 .............................. CGTAGGCATACAATCTATTCGCTTCTGGGTCAAATCTAA 145594 30 100.0 42 .............................. TTTTCATCCTTTACGAAAAATCGTACTGCTAGCCACATACCA 145522 30 100.0 42 .............................. TTAAAAACTATGAAAACGTTTCTATTGCATAGAAAATAAAAA 145450 30 100.0 38 .............................. TCTGCACCGTATTTTTCAATGAGCTTTGCTAATTCTAT 145382 30 100.0 36 .............................. TTGAATTTTCTAAGCTCATAACCAGCGCCATCTCAC 145316 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================= ================== 111 30 100.0 40 GTTTTAGAAGTGACTATGAGGGATGGAAAC # Left flank : TTCACTTTCGCTTTAATTGCCCACACTTAAAGAATTCATACCATACGTTCATTCGTTATTACAATATTCATTTTCACCACATCTTTTCGTTACGTAACATAAGAGAACACAACAGTAACATTAATATCTTCACAATATCAATAACTCATAGCGGTATACCTTTGAAAATTAGAGCAATTATAAAAAACATCCGTTGTTATCAATATAAATGAAATACAAATACATATAAAAATTATCATAAACGCAAAACAAAACTACACAAATTCCCAAAGATACCTTCATATAGCATTAACAACAATCCTAAAATTGCACTAATACAACATGTCTAAAATACACTTTGTAACGATTATGTAAACTCACAAAAAATCACAGATTTTTCGGGGGATAGTTTCCATCTATGTTCAACCTAAATAGGCATAAATACGAGCTTTTCAATTTTTACAAATGTAACTGTCAAATTTAACAAAAATAATGGTATAATATCTATGGGGGTCTTATGA # Right flank : TATCCAATACCTGTGTTTAAGACGTCCAGAGACTTCGTTGAAAAACGTTGAGGCGGAACTTCTTGCTGTCATGGCTGCATTAACGAAGCTGAAGGAATTATATTGTTCGTTGAAAGGGGAACGAGTAGTAATTGCCTCAGATTTAACCGAGGTTCGAAACTTTTATGGAAATGCATTTAAAAATCAAATTTATATCTCAATTGACCAAAAAAATAGTAGTGAAAAAAACTCTGATGCTACTAAGGAGAAAAAATTCCAAGAAGCACTAATCGCACAATTTCGTGAAATTGTCAGGCATTTGGGTTGTAAGCTTTCATTTGAATATGTTAGAGGACACTGGATGAATGTACTCCACAACAGCGTAGATTCCACGCTTCTGAGAATAATAAACAAAAGAATAGCGACAGAAAAAGAGAGTATTGCAAATGACAAACAAAGTGACAAATCAGGATTGGCAGTTGCTTACCTTCCTTCACATATCTTTTCGGAGTTTGAATTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTGACTATGAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 165622-165312 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011393.1 Fervidobacterium pennivorans strain DYC chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 165621 30 93.3 40 T...................A......... TTCCAAATCCCTTTGTATTTCCTGTTTGCCATCTTCTTGA 165551 30 100.0 41 .............................. ATTATTAAGACGAAGAAAAGAGGAAAACGGAAGTATTTGAA 165480 30 93.3 43 ......................T.....T. TCGATATAGTATAATGATTAGTAGCACCTTATATTGACGTCCA 165407 29 73.3 37 ..........A.G...-.....GAA.C..G CAAAATTGCTTCCTTTATTTGTTTTGCAATGAGTGTC 165341 30 70.0 0 .....G.....C.GG..A...T..AT.G.. | ========== ====== ====== ====== ============================== =========================================== ================== 5 30 86.0 40 GTTTTAGAAGTGACTATGAGGGATGGAAAC # Left flank : TTAGAAAAATTTAAACAAATAAAAGCCAATCCTCATGGATTGGCTTTTTTTGTGATCGCTTAAGTCATTTCACAGAATCCCATCCTTTAAACCATACCCCTTTTGGTTATCACAATATTAATATTATCAACACCTATTTGTTACTAACTATGTGAACACACAACAGTAACACATATATCCAAAATTCAGAATAACTGTTTTGACAAATCAATGTACAAATAAATATCACAATTATCCAATAAGAAAACAAAAAAACGCACCACATTCAAAAGATACATTCATACGCCGTTAGCCACAATCCTAAAATTGCACTATACAAAACGTCTAAAATATCATTTGTAGCGATTATGTAAATTCACAAAAATTAATCATTTTTTCGGGGGATAGTTTCCATTCGTGTTCAACCTAAATAGTTATAAATACGAGCTTTTCAATTTTTACAAATGTAACTGTCAAATTTAACAAAAATAATGGTATAATACTTATGAGGGTCTTACGGT # Right flank : GCAGGCTGGCGTTTGATAAAAGTTTCTTTCCACGCGTTTTTCAAAAACAGTTGTGTTTGGTAAGAAGGTTTTGAGTGTGGTTGTGTTGAAAGATTTAGGCATGGAAAGTTAGGAGTTTTGTAAATCCAACTGTGGAGGTATCGAATATGGTAAAGGTACTTACGTTCTTGGGAACAAGTTCGTATCAAAAGGCTATAGTTAAGTTTGATGATTTTGAAACATCTCAGGAGTTATTCCCACTTGCTTTGTTGGAATTTTTGAAGATGAAGGAAGGCAAGGATATCTCAGCTGCGTTTTTCTTGACTGAGGAAGCTATGAAAACATACGATAAGTACAATGTTGAACGGTTTTGCAGTGAAAACGGCATCAAAGTCCAGAAGATTAAAATTTCGGAAGATGAAAGCGTAACTGATTTTGTACGAAAGGCTGCGGAGTTGATAGATGATGGAGACCTGGTTATTTTGGATGTCACCAATTCTTTTAGATCAATTACCATGACA # Questionable array : NO Score: 3.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.30, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTGACTATGAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [17-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 3 179852-186394 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011393.1 Fervidobacterium pennivorans strain DYC chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================== ================== 179852 30 100.0 42 .............................. TAACGGAGGTAAGTATCAGGGGTCGACGAAGTTTCCATCCCT 179924 30 100.0 39 .............................. TCACGTGTACGGCTATTTGTGATGACTGCTATAATTCTT 179993 30 100.0 40 .............................. CGTGGGGGAGTCCACCTCCTTTTTTTATTTTTTTATTTTT 180063 30 100.0 43 .............................. ACCTCCCCCTTGTTTTTTTCAACAAACTCTAATAATGTCCTTA 180136 30 100.0 40 .............................. AAAAAATAGCCGTACACGGAGCGTTCACGTGTACGGCTAT 180206 30 100.0 45 .............................. TTTCTTTACCATTCACTAGTACACGTGTTTCTAGATAAAGTCTTT 180281 30 100.0 40 .............................. CAAAACATCTTTTCTAAAATGTCTGAATTCCGTGTTTAAC 180351 30 100.0 35 .............................. GGCTTTATAAACTTTTGTTTCCTTACCGAAAAATA 180416 30 100.0 42 .............................. GTCTATCTCCTCCTATTTTTACTTTTTTCAGCACTTCAATTT 180488 30 100.0 33 .............................. TGATTTGTTCCACCAAGTCGTTTGCATAATCCA 180551 30 100.0 41 .............................. GGGAGGACGACTATTATCTTGTATTCGCCATAACACAAACA 180622 30 100.0 43 .............................. CGCCCATACCGGGCAATGTATGATAGCCCGGTATGGCATCCAG 180695 30 100.0 43 .............................. TAATCCACTAATTCAATTTTCTCAATGACCCAAACTTTGTCAA 180768 30 100.0 37 .............................. CAACAAACTATTCTGTTTCGGAATCGCATACTTGGGT 180835 30 100.0 42 .............................. TTTCCCGGGCATCAGGGTGTATTCAAACCACCCTGATACCCG 180907 30 100.0 38 .............................. CGAAGGGGTGGGTGGTATGGTGGTATATATATTTTAAA 180975 30 100.0 45 .............................. CCTTTTCAGGGAGAAAAAAACCTCCCTGAAGCTTCTTATGTTCGT 181050 30 100.0 41 .............................. TGAAAAGTTCTCCAGACCAAGTTTAATAGTAGCGCTTATAA 181121 30 100.0 42 .............................. TGGGCCTTATGAATTTTCGTTTGTTTAGACTAAAATACGTGT 181193 30 100.0 41 .............................. ACTTCCGCACATTGGTTGTTCCCTGATAGGAACAACCATCG 181264 30 100.0 37 .............................. TTATTACTTTTCTTACATTTTCTACCGCCTGGTCGTC 181331 30 100.0 41 .............................. CCGATAATTTTCCCGTTGTTTGTCTCGAGGAGTTTTATTAA 181402 30 100.0 42 .............................. GAACAACCGGTTACCGTGAGAATCTTCTTTTCTTCCATATCC 181474 30 100.0 37 .............................. TTTTACTACATCTTCACTATAAGTTTTTGTTACAAGG 181541 30 100.0 39 .............................. ATTATTCCTGATTCCGTTAGTTTAATTGTTTCGATAATA 181610 30 100.0 42 .............................. ATGTTACTAATTCATTCTCAGGCAAGCTTATCTCAAGCCTGC 181682 30 100.0 35 .............................. CAAAGAAAATAATTGAGAATTCAGGCGTAAGAATA 181747 30 100.0 37 .............................. GCCTGGTCGTCGACTACCCTTACCAATTCGATGGTAA 181814 30 100.0 39 .............................. CATTTTCCGTATATGTTTTTTTTGCAAGCTCTATTATCC 181883 30 100.0 43 .............................. ATCGTGGAACTTCCACGATGTTTTCTCCATCAGAAGCGTACAA 181956 30 100.0 37 .............................. TGGCCGAAATGGCCGAGGAGATTGAGAGATTGTTACA 182023 30 100.0 40 .............................. TTAGACCTTTAATTTCCATTTCCTTTACCCGAATTAATAC 182093 30 100.0 38 .............................. CAAGAACCGTCACTTCCAAATACAGCCTCTTCATAAAA 182161 30 100.0 42 .............................. TTAAGTACAACCGTTTTAACGTCCGTATTCACCATACCTCTA 182233 30 100.0 43 .............................. CTGAAAAAGCACTCGCAATAATCAATCTCATACCAAACCCCTC 182306 30 100.0 44 .............................. CGTCGGTTCCCCTTTGCTCCAATAGGCAAAGGAGAACCTTAGTT 182380 30 100.0 43 .............................. TGTACTCCGTGTTTAACCACTCCTCCGCTTCGAAAATGTTGTC 182453 30 100.0 42 .............................. CGAAATTTCTTTTGATTGGTGGTGCCTTGGTAGACACCACCG 182525 30 100.0 37 .............................. CTCCCTCAAACGCTGGCAAAGCTTTTGCCATGTCTTC 182592 30 100.0 41 .............................. GCACTAGTTCTATTACTAACTCGGCTGGTGGAACCTTTTTG 182663 30 100.0 40 .............................. TTTTCCATATTTTCCATATTCTCCCCCCACGCCTGCCGCC 182733 30 100.0 41 .............................. CACCGTTTTTAATTAGCTCCACCAAGTCGTTGGCGTAATCC 182804 30 100.0 37 .............................. CCGTTGAGTATAACAGCGTTACCCATACTTTTTTCCA 182871 30 100.0 41 .............................. ACTAACTCAACTCTCTCAATGACCCAAACTTTGTCAATCCT 182942 30 100.0 43 .............................. CATTCCCTGCGGGTCTAACTTTACAAGGTCCACCGTTAGTTTT 183015 30 100.0 41 .............................. ATATTCTCCCCCCACGCCTGCCGCCGCGTGGGAGGTTCACC 183086 30 100.0 37 .............................. TTTAATAACATTACCCATACCCATGTTTCCCATATTC 183153 30 100.0 41 .............................. GAAAATAACTTTTTTCAACTTCCGTTGATTGGTTGTTCCTT 183224 30 100.0 45 .............................. GCGCTAAGTGTGTGTGCATCACTTTCCCAGTCAAGATAGAGTACA 183299 30 100.0 42 .............................. TGGGCTTTATGAATTTTCTTCCCTTCAAACTAAAATAAGTGT 183371 30 100.0 42 .............................. CTTCGGCCGTCCTGGAGGCTTTTATTATTTTATCAACCTCCT 183443 30 100.0 38 .............................. CCATCGCCATTCCGTAGTGCTTCCAATAAGTCAAATAG 183511 30 100.0 36 .............................. CCATTAAGTACAACAACTTTTTTATCTACCATATTC 183577 30 100.0 39 .............................. TCGAGGATTTTGATTATTTTTTCCACCTCCTCCCTTTCG 183646 30 100.0 39 .............................. TCTATCGTTACTAACTCATTTTCGGGCAGGCTCACTTCA 183715 30 100.0 39 .............................. TTATCACCTCCTCTATTTTTTCTCTTTCAGTAATGAGAG 183784 30 100.0 43 .............................. CATACCTTATCAATCCTCATACCTAATACCTCCTCGTTTTAGA 183857 30 100.0 43 .............................. TTGCTGGGCTTGATGAATTTTGCCCTTTTCAGGGAAAAATACA 183930 30 100.0 46 .............................. CGAATAATTGTAATAATTCGTCATTGGTTTCTGCGAAAATTTTGAC 184006 30 100.0 38 .............................. AGCAGGTGGTACTCATACCACCCTGCCACCCGGTCGCC 184074 30 100.0 43 .............................. CTCAAGAAATTGAATTATTTTTTCCACCTCCTTTTCGTCGTAT 184147 30 100.0 42 .............................. CCTGGTAGGAACAACCATTCAAATTAATAACTTTCTCTACAA 184219 30 100.0 39 .............................. CTAAATTTCTTAATGTTGGTGGTACCTTGGTAGGTACCA 184288 30 100.0 39 .............................. AATGAAAAAACGAGTGATATATGTTATACTGGAAGCGAA 184357 30 100.0 43 .............................. TTGTTCAAACTGAAATAAACATTTTTAAACCGTTTCTGGTTGG 184430 30 100.0 39 .............................. ATGTGTACTGCGAGTTACTTTGTGTTAAGCCTTTAATCC 184499 30 100.0 41 .............................. CCAAGTTCACCCTCACCGTGCTTGAGCAATTCCAAAAGGTT 184570 30 100.0 42 .............................. AAAATTTCGTTGGTTGGTTGTGCCTTGGTAGGCACATCCTTC 184642 30 100.0 41 .............................. CTCTTTACGTTCGGTGCGACTTCACCGGCTTTGATTAGTTC 184713 30 100.0 42 .............................. CGTTTGCAATTTCTTTTTGTTTTGCGGCTACTACTTCAAGTT 184785 30 100.0 41 .............................. TCGCTCTTGAGTAGTCAGATCTTGTATCTCCGAAATCATGT 184856 30 100.0 35 .............................. CAACTGGGAGGACGACTATTAGTTTGTGCTCTCCG 184921 30 100.0 35 .............................. TAAAGCTTGTTTTTTGTTTTAATACCTTTACCATA 184986 30 100.0 37 .............................. TCTCGCCTCAGCCCCTACTCTAACTGAGGCGATTTTC 185053 30 100.0 39 .............................. GCCCTCACCGCTTTTAATAAATTGTGTTATATCCATACT 185122 30 100.0 36 .............................. GGTAATTCTTGTTCAATCCGTTATTCCACTGTATAA 185188 30 100.0 36 .............................. GAAAATCACCGTGATAATAGAAGACTTCGCCAATCT 185254 30 100.0 38 .............................. CATCTTGAGCCTTGACTGTTTTCAACCAATACTTATAC 185322 30 100.0 37 .............................. CTTCGTATATAAATTTTCTTTTGCAATCGGTTTTAGT 185389 30 100.0 37 .............................. ACACTCGCCATTTATCAACACCCTTACCCATCATTTC 185456 30 100.0 35 .............................. TACCCTGCCTTGAAATCACCAAATGCAATTACCCT 185521 30 100.0 41 .............................. CTAATCCCTCCCATGCGTTTTGTAATATGGCAAGCAAAATA 185592 30 100.0 41 .............................. GAAAAGCGGAGGGCGTTTTTATTATCATTCGTCCTTAACGA 185663 30 100.0 41 .............................. ACAATGCAACCGCCTGTTGAATTATTTCTTCGTTCAGATAA 185734 30 100.0 39 .............................. TAAATCGGGGCGCGATTAATTTCATCAAGGAAAAGAATA 185803 30 100.0 45 .............................. TGAAATCTCGGATGGAAAGCATCAACTACTTTAAACATAAGTGCC 185878 30 100.0 40 .............................. CCCGAAGCTTATACCAGCAACACTTGTTACATAACTAACA 185948 30 100.0 39 .............................. AAAAACCCCTTCTTTCTTTTTTTTACTCATCATCAATGA 186017 30 100.0 43 .............................. TTATGCCCGATCCTTGTGCTAATATCAAAAATCTTTTTAACTT 186090 30 100.0 38 .............................. TTGTTATGATTCTCAAATGTTCCCTTTCGATACTAATA 186158 30 100.0 41 .............................. ACTTCAAACAGTTCCGCTACATTTTTCGGTTTGAATTTAAC 186229 30 100.0 41 .............................. TTCGCTTCAGCGTTTGCTCTGACTGTTGGATTTATTTTTTG 186300 30 96.7 35 .........T.................... ATTATTCCGTCTGGAACTTGCCCTGTTTGATCGAA 186365 30 86.7 0 .....................AG.A..G.. | ========== ====== ====== ====== ============================== ============================================== ================== 94 30 99.8 40 GTTTTAGAAGTGACTATGAGGGATGGAAAC # Left flank : CATTCCGCACCACAAATAGTCCACACACCTCTCAAATAGAATACCAGCTTTAAGTCGCTATCATTTCTTCCGTTTTGTTAATACATTATTTATCTATACATCACCTATTTGTTACCTGATTTTTTCTTCTCATCTGTAATTTTTCTTATCCAACACTTAATTCAGATTTTTTATTTCATACCAGCTTTTTTAGCCATTATACATCAAATAATAAAATTTTATTAACTCCAAAACAATCTTTCTGCAATCTTTTTAAACCCTCTTTTCCCGTTTTTACTTCATATTTTATTAATATTTTTTCAAAATCCTCATAAATACATGCCGCATTTTCTGCCCTTTGTAACGATTATGTAAACTCACAAAAAATCACAGATTTTTCGGGGGATAGTTTCCATCTATGTTCAACCTAAATAGGCATAAATACGAGCTTTTTAATTTTTACAAATGTAACTGTCAAATTTAACAAAAATAATGGTATAATATCTATGAGGGTCTTACGA # Right flank : CAATCAACTGAAGCGCTCGTATGCTTAAACGTTATTTCAGCAGAAGGAATAAATAGAAACAAAAAAGACCTCTGCAAATGCAGAGGTGCAATTTTTTTTGTTCTTGAACTTGAATGTACAGTATTAAATAAAAAACCCCAGTGAGCTTTTGCCCACTGGGGTTTGTTTTTATTGTTTATTACATCTGCTCGCTTGTGTTTGTTCCACCTTGAGCTTGTTGTTTGTAGAGGTATTCGCCTATTTTCATGCTTTCTCTTTGCAAGTCGTCGAATAGTATCTTGACTTTTGCGATGTCGTCTCTGTTGATTGCATCTCTCAAGTCCCTAATGATTTCCTCTAACCTGTTCTTTGTATCTGCCGGTATCTTGTCGCCGTTTTCTTTGAGTATTTTTTCGATGTGATATGCCAAGTCATCTGCTTTGTTCTTTAGTTCGACCTCTTCGCGTTTTCTTCTGTCTTGTTCTTCATACATTTGCGCTTCTCTAATCATTCTTTCGATA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTGACTATGAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 4 1250556-1251645 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011393.1 Fervidobacterium pennivorans strain DYC chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================== ================== 1250556 28 100.0 40 ............................ TGTGTTGACTATTGTTTATTGTCAACCCCCTAACCTTGAC 1250624 28 100.0 37 ............................ CCAGTTCGGCCGTTTCCCTGGAGGCTTTTATTATCCC 1250689 28 100.0 41 ............................ ACTCAATCCCGTACCTTTGCAAAAACCGTAATTCCCTCGAC 1250758 28 100.0 43 ............................ GGAAGAATTCTTCGATCCATATCCGTTGTACAGAAATGGATAC 1250829 28 100.0 44 ............................ CTGATGTTCGTGCTACCCTGATACTTGCTACCCTCAATAATTAC 1250901 28 100.0 44 ............................ ACGCTTTGTCCAAAAATCATAGCTGAAACAAATATAATTACCAC 1250973 28 100.0 41 ............................ CAAAAATTAGCAGTGCACTTTTTTTGAAGCCGCGGTATTCC 1251042 28 100.0 45 ............................ CTTCTGGATAAGCTGGCATTCTTGAAGCTTTGATTATTCTGTCGC 1251115 28 100.0 45 ............................ AAATATATAGCAATACTTACTTCGATTGGTCTAAAGTCATCAGGC 1251188 28 100.0 43 ............................ GCAACGAACCATTTGGCTTTGATTTTACCATCAATGTCACGGC 1251259 28 96.4 46 .....................G...... AGATCGTTTTGCTGTAATGCTTCCAACGTAGTGTAAATTTTGGTGT 1251333 28 82.1 45 ..........TG...A.TT......... TTTTGAAATCAAGCGTTTCAAGCCCATTTTGAATTTTTCTTATGT 1251406 28 82.1 41 .....C.....G.....A..T.T..... AGCATGGGTTCCTGTGTTATAATAAAAGCGGAAAGCGAAGT 1251475 28 92.9 42 ...............A........G... GAAGAGGCAAGAGAAGAAGATGATGAGTATAGAAAATGGTGT T [1251482] 1251546 28 96.4 43 .......................A.... AATCCAATATCACTTTGCCGGTTGTTTGTCTGTGATCATTTGT 1251617 28 78.6 0 ...G...AA....G....A........T | A [1251640] ========== ====== ====== ====== ============================ ============================================== ================== 16 28 95.5 43 TTTAGAAGTGACTATGAGGGATGGAAAC # Left flank : AAAAAGTGGTTAGAGGAAAACCTATGAAACCAAAGTCGTTTTAAATAAATTGTGAGCTGTTGAAACCTAAGATTACTTATACCAATAGTAATATTTAGTTTTATTTTATGTAACACAAAACAGTCAATCTCAAGTGTAATATCTTGTATCAAAAATATTGATTGCAAATTCTATTTGATGCGACAAATTCGGAACTTGCTTAATTATAAAGAAATATAACAACAATATAAATGCATAATAAAATAAACACAAAAAACCACAAATCTGGCATATTATCGTCATAAACTATTAAATCCATTCCTGTAGGCTCTTGAAATCGAGGTTTTTCAAAACCACTATGTAACGCTTATGTAAACTCGCAAAATTCACCCAATTTTTGCCCCCTTATCCAAAATAAATTTTTTCCAAAAAGCTCATGTATAAATCACTTTTGATTTTTACAAATGTAACTGTCAAATTTAACAAAAATAATGGTATAATATCTATGAGGGTTTTACGGC # Right flank : TCTGAAATGGTTAGGAGATTTTGTTTTAGAAGGGACTAAGAGAAAAGTAGCATGTGAGAATTGATAATACCAAAAAATAAATGCCCTGGTGTTTTTCACCAGGGCGATTTGGTTTATTTTGGTTACGGAATCATATTCCCGGCTGCGATGTAAAGGCTGTACCACTCTTCTCTTGTAAGATCAACATTTTGTGCTTGTGCAATCTTTTTTAATCTTTCTGGATTTGTTGTTCCAACGATTGGTTGAATCTTTGCTGGATGCCTCAAAATCCAAGCAATGGCGATTGCTTCTTTTGAAACGCTATATTTGTTTGCCAAATATTCTAATTTAGCGTTTAAATCAGGGAATAATGGGTTGTCTATAAATACCCCCTGTATGTTTCCGTATTCGTTGCCGTATTGGAATGGAGACCATGCTTGAATTGTTATTCCTTTCAGCCTGCAGTATTCAAGGATACTCCCGTCTCTATTAATTGCTTGATGGAATTTTGTGTTTGCAAA # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTAGAAGTGACTATGAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //