Array 1 158017-159305 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACCD01000003.1 Yersinia rohdei ATCC 43380 contig00261, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 158017 28 100.0 32 ............................ ACCAAAGAGAGAGAAACATTGTGGATAACAAA 158077 28 100.0 32 ............................ TAGGTAATAAGGCAGTAATGTTTCATCTTCAT 158137 28 100.0 33 ............................ AGTATCATTCTTTGGCGTCAAATCGGGATACGG 158198 28 100.0 32 ............................ ATGACGAGTAAATCAGCGAGTGCCGCTGCCAG 158258 28 100.0 32 ............................ TTCTAGGCACATTAAGACGCGCATTTTGCCGA 158318 28 100.0 32 ............................ CACGTCGTCACGTGGAGCGGATTGCCCTAATT 158378 28 100.0 32 ............................ CATTCGCAGAAGTTAAGGCGGCGCACGATACT 158438 28 100.0 32 ............................ TTTTAGGTAAAGTGGGTGCGGCGCAGGGCGCA 158498 28 100.0 32 ............................ AGTCACACCGTCCGCGAGCTAAAGCTGCTACA 158558 28 100.0 32 ............................ AAGCACCATATGAAACAAGCCCAGCACCTATC 158618 28 100.0 32 ............................ GATAGCTGTTGCGGTGTCTCTTTCCTGAAAAG 158678 28 100.0 32 ............................ TTCTTGCTGCCATTTCTAATCCTTGATATTAA 158738 28 100.0 32 ............................ ACAGGCGCTGGCGGGATGGACACTGGCACGGT 158798 28 100.0 32 ............................ GCAAAACGGGATGGCTTCCGTCGCTGTGGCAT 158858 28 100.0 32 ............................ AGCGGTGTAAGTAGCGTAGAAGCCACCTACGC 158918 28 100.0 32 ............................ TACTACCTCCATGGGGACATATGTGGGTATAG 158978 28 100.0 32 ............................ ATAAAAAAAACTATTTCACCTTCAGTGTCTCG 159038 28 100.0 32 ............................ TACTTCCCCGATCTGCGCCAACGGCTGTTTAT 159098 28 100.0 32 ............................ TGGTCTTGTTGCATAGCACGACGCGCCAGCCG 159158 28 100.0 32 ............................ GCCAACGCGGTAATTGGTTACATGCGGCGGTA 159218 28 100.0 32 ............................ TGGAGAAAGAGCGCAAAGAGCGTGAGAAAGCA 159278 28 96.4 0 .........T.................. | ========== ====== ====== ====== ============================ ================================= ================== 22 28 99.8 32 GTTCGCTGCCGTGCAGGCAGCTTAGAAA # Left flank : GCGCAAGACATCGATAATTTGATGCAGCAAAACTGGTTACAAGGTATGCGTGACTACGTTCGATGCAGTGCGGTATTGCCGGTGCCTGAGGCAGTACAATACCGAACGGTGAGGCGAGTACAGGCAAAAAGCGCCCATAACAAGCGGCAGAGATCGATTGCTAAAGGGTGGCTAACTGAACAGCAGGCGTTTGAACAAATACCCGACACCCAACAGAAATCTCTCAGGTTGCCTTTTATTCAACTGCGTAGCCTTTCGAACGGCAATACGATGAGAATTTATATTCAGCATGGCGAATTGCAGGAACAAGCTCAGTTGGGAAGTTTCTCTGCCTATGGTCTAAGTAGCAGTACCACCATACCCTGGTTTTAACCCTTTTTTTCGGCTATTGCTAACTGATTGTTTTGTAATGGTGTAATGAGAGGGTGAGAAAAAAGGGTTTATCAGTCAATATCCTGATTTATGTTTAATAAACAGGGTGATGGCATATTTTTATTACC # Right flank : ACTTTGCCGCTGTGTCACTCAGGACCTCGGTTGACATTTGATCTTATATACCCAATTTAGTTTTTAGCACTTCGTAAGGTGTTTTTCCACCATGTGCTGAATGGGGGCGATGACAGTTATAAAATGCCTCCCATTCCGCTAGTTTTTCATGAAGGTCGACATCATCCGTATAATCGATAAGCTGATAAAATTCCTGTTTATCTGTCAGATGAGAACGTTCTACTTTTCCATTTAATCTCGGTGTCGCTGGTTTAATATAAACATGCTCCATCCCTAACTCATGCACATGCCAATTAAATTTCGCCTGGAACTCATGGCCATTGTCTGTCCTGATGGTTTTTAGTCGGAAAGGAAATTTATTCACAACGTAATCAATAAAATTAATCGCATTGGCTTGATTATGCCGCTCATAAATTTTTAAGGCTCGTATCCGGGTCGCATCATCAATTGCGGTATATTGAAAACGCTTAATCCGTTGACCATTAGGACTATTAAAAAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //