Array 1 1140620-1138864 **** Predicted by CRISPRDetect 2.4 *** >NZ_QBDX01000004.1 Hyphobacterium indicum strain 2ED5 Contig_4_length_1201708, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1140619 36 100.0 30 .................................... ATAAAGACAGCGGTGCGCCACGCGCAGATC 1140553 36 100.0 30 .................................... CTGCCGGCCATGCGGGCCGCGCCGAGCGTG 1140487 36 100.0 30 .................................... GAATGGCGCGGAACGTCTCGTCGCAGAGTT 1140421 36 100.0 30 .................................... TGATTCGGGGCGCAGATGCGGCCAAGGCAT 1140355 36 100.0 30 .................................... ACATTGCCGATGCTGTTCTGACCGCCCAGG 1140289 36 100.0 30 .................................... TATCCACGGTCTGACGGTCCAGTGTGTCGG 1140223 36 100.0 30 .................................... TCCGGAGACCAGCACCGGATGGGAATATTC 1140157 36 100.0 30 .................................... TAACCGGGATTGGCGGTGTGATCAAAACGC 1140091 36 100.0 30 .................................... GGCCCGTGGTGTGGCCGCGCAGAAAAGCAG 1140025 36 100.0 30 .................................... ACGCCCCGCACACACCCTTAGAGCGCCACA 1139959 36 100.0 30 .................................... GGTCCAGCTGGCGCACACTGGCCGAAGCCG 1139893 36 100.0 30 .................................... AGGGCGATTGTCCTCACGGGTGGCCGGGAG 1139827 36 100.0 30 .................................... TAGGCTGAAAGCTGCTGCTGCACCTGCGGA 1139761 36 100.0 30 .................................... GTATCCGCCGCCATCTACCGCCTCTCGCAG 1139695 36 100.0 30 .................................... CCAGCCCTCGGGCGCTTCCCCATAGGTGAT 1139629 36 100.0 30 .................................... AGATTCGGGTCCATCATGATGTGCTGGAAT 1139563 36 100.0 30 .................................... AGATATGCGGATACTGCTCTGCCCGCTTTT 1139497 36 100.0 30 .................................... AGCTCTACTATGTGAACGGCACGGTCCGGA 1139431 36 100.0 30 .................................... TGTCGATAGCCTTTTGAGCGTTCGATACTT 1139365 36 100.0 30 .................................... CTAGACTGGCTTGGAACGCCGGGAGGAGAG 1139299 36 100.0 30 .................................... CTGGACGAATCGCTAGGACCGTCTCGGCTT 1139233 36 100.0 30 .................................... TTAGATGGAGCCCTCTCATGGCTATCACTG 1139167 36 100.0 30 .................................... ACACGTGACAAGCGAAAAATCAGCTTGCAT 1139101 36 100.0 31 .................................... TGAAGGTGGCGAGGCGTTGGCGAGTGCGGTG 1139034 36 100.0 30 .................................... TGACGGGATGGTGATGGTTCCGAAAGAGCC 1138968 36 100.0 30 .................................... GCTTCATGTCAGTCCTCCTGTGATGTGGGG 1138902 36 86.1 0 ..A...A......................GT....T | CT,G [1138867,1138873] ========== ====== ====== ====== ==================================== =============================== ================== 27 36 99.5 30 AGTTTAGCTGATCTGAGTATGCGGTCCAACCGGAAC # Left flank : GCTGGCGTCCTCATTGGCAAGGGTGTTTCTTGGCGAATGCAAAGACCTGGAGCTGCCGCAGCCGCCACTCGAACTCAGCCTCGCCAGCGTGATAACGAAATGAGAGCTCTCAGTGGGTATCGGTTGATGTGGATGATGGTCGTTTTTGATTTGCCTGTAACCGAAATTGAGCCGCGAAAAGCAGCTAACCGGTTTCGACTTTTTCTGAAAGACCTTGGCTTCGAAATGGCCCAGTTTTCGGTTTATGTCCGCCACACCCCGGGCAAGGAAGCGATCCAATCCTTGTTGTCTAAAATCGAGGCGGCTTTACCGGCAGAGGGAAAAATCGATATCTTGCAATTCACGGACAAGCAGTATGAACGAATCATTTCCTTCAGAGGAAGATGCCGTGGACCTGATAAAAAAGCTCCAAATCAATATGAGATGTTTTGATCCAAACCGATTTTATGAAATAGATTCAGCAAATAAGGGCGATATTTCAACACCCTATTTGCTGCTCT # Right flank : GAGCTTATTCCCCCTACTATGAAGAGAAACAGAGAGTGGTAAGCTAAGTGTATAGCTAGGCGCTCAAATCACCCCTGATATCTCTCCACACCCCTACCTACCACATCTCTCCTATAACCGGCTCTCCTCCTACGACACTTAGATAGTGGTAGTGCATTCTGTCTAACAACCAGTCCCTTTCATCCTGCCTTACGATAAAGCCATCATGGATAGAGAGGAGGGTCTTGGATTCAGTCAATCCATCAAGCATGATGCGCAAGGCAATCTCTGACTCAATCCGGGAAATGCTCAATCCTTCCTGTGAGAAGAAGCGATGCCTGATGGGTTCATTGTGGGCTGTGAGCAGGTTCAGCGCCTCGTCGATGGTTGCAATTCGATGGATGGCGAATGCGTCTTCGTAATCTTTGGTGCTTCCGCGACCCTTTGAATTGAGCAGCCGGTTGAAGAGCTCTTTCATGCCGTTTCGTAATTCCTGCCAGTCGAGACCAGCCGCCTCTGCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTAGCTGATCTGAGTATGCGGTCCAACCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.80,-1.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //