Array 1 106757-108803 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOJL01000062.1 Halorubrum coriense DSM 10284 contig_62, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================================== ================== 106757 30 100.0 35 .............................. TTGATGCGGTGTTCGGCATACTCGTCGCTGGTGTC 106822 30 100.0 36 .............................. GGCTCGTGATCGCGGAACTCAAAGACGCCCGTGCGG 106888 30 100.0 34 .............................. AGCAAATGGTCTACGTGATCGCCGGAGCCGTCGC 106952 30 86.7 0 .........................N.GAT - Deletion [106982] 106971 30 90.0 34 .G.CN......................... AGCAAATGGTCTACGTGATCGCCGGAGCCGTCGC 107037 30 100.0 36 .............................. GAACTCGTGGAGAATCGCGACCGTGTTCTCGTCGGT 107103 30 100.0 36 .............................. CGCCTTCGACGTGCCGGTTTCGATCATGTCGGCGTC 107169 28 76.7 0 .......................NATGG-- - Deletion [107195] 107186 30 83.3 30 ..GGGGN....................... CGCCTTCGACGTGCCGGTTTCGATCATGTC 107252 30 100.0 37 .............................. GCATGGTCGTCTCGATACGACCGCCGGGTCTGGGGGC 107319 30 100.0 37 .............................. GGCTTGACGCCGTCGTTCGCGAGCGGGACGTCCGGCG 107386 30 100.0 36 .............................. CAACAAGAACCGCGGCCGCACAACGTCCGTCTCCGG 107452 30 100.0 37 .............................. GGTGGAGAGTCGCACTGGTGACGCCAATGATAGCCGA 107519 30 80.0 51 ........................NACCCT TGTGGGGTCGAAGCGGTGGAGAGTCGCACTGGTGACGCCAATGATAGCCGA 107600 30 100.0 36 .............................. GGTCACGGCGAGCTGCCCGAACCCGAACGAGAACAG 107666 30 100.0 37 .............................. CATTGTCGATACATCTTACCCACCCAGTCTGATGAAA 107733 30 100.0 35 .............................. CGAGATCTGCTCCAAAGCGTCCGGAAGGAGCGCGT 107798 30 100.0 34 .............................. GCGTAGTTGCGACCGAGCTGGATCCGCGTGTACG 107862 30 100.0 34 .............................. CATGTCGTGGAACCGATACACCGGCGTCTGCCAC 107926 30 100.0 36 .............................. TTCAAGAGCGCAGATCTCTGGGGGCTGTCGTACGTC 107992 30 100.0 35 .............................. GACCGCTCGCAGGATTGGGAACTAGACCCCTAGTC 108057 30 100.0 37 .............................. GTGGACATGGATTACGCTCTCCTTAGTGTCGATGAGC 108124 30 100.0 37 .............................. CCCGGAAGGAGTGCGAGGGCGAGCATCGCGGCGGTAG 108191 30 100.0 34 .............................. ACGACGTCGGCGAATATCTCGGCAGGGGAGTCCT 108255 30 100.0 34 .............................. TCTTGGACACGTTGGCTTGTGGTCCAATGGTCGG 108319 30 100.0 32 .............................. GCGGGGGGTCATAGCCCCACCTCGCTCGGCTC 108381 30 96.7 33 ........................T..... ATCGTGCGTGGGTACAAGCCAGGCGACGACGAG 108444 30 100.0 37 .............................. TATTACTTCGCGAAGCGCGAGCAAGCGTATATCGTCA 108511 30 100.0 36 .............................. TGAATCCCGCCCGTCTCGTCGCGGAGGGTCCGAAGG 108577 30 100.0 35 .............................. CGCAAAATGGAGAGTGGCCTGATGATCGACGAGTA 108642 30 100.0 35 .............................. TTCCTCGGTATCGACGCCGACGGTGACGGGACCAA 108707 30 83.3 37 ..........A.....C.......T...TT GGGACTACACCGGCCGGGACATCAACCTATGAGCTCA 108774 30 80.0 0 ........C.A.....G.......T...AA | ========== ====== ====== ====== ============================== =================================================== ================== 33 30 96.3 34 GTTTCAGATGGACCCTTGTGGGGTCGAAGC # Left flank : TTCTGGAGCCTGGCGACGAGCGACTCGCAGACGCAGTCTCCTCGGCGTCAATGTCCGATTTGGAGGGAGAACACATGATCGAAGAGATTGAGGACTACGACGATGTGGTCGCCTGCTTCACCGACGAGGAACGGGCCGACCTGCTCGGCGGAGATCTGGAGGCAGGCGGCATCGTGAGGCATCCAGGGGCACAGGTCAACACCGACCCGGCCGCGTGGACCGAAGAGGTCACGATCGGGAATTCACGATACCTGCTGGTTGATGCCCTCGATACGTCCTACCACCCCGTGTTCGGCGTTCGATGAGCAGACTGTTTAACATCAACACCAATAACGTCTGAACACGATTTTGATTCCCGCTTCTATTGATAGTTGGCTGATATCGCTTGAGATACCGTGGATTATGTCGACCCCCCGGGGTATGAGAGGGTATTGCGGGTCGACCGAGTCGTATCCCTCAGATCCACAGATATAAAGCTAGTAACCGGCAATATCGGGATG # Right flank : ATTCTGTTTAACCAACAGTTGGTGGCTATTGGGTCGTGTGTTGGTTAACTCTCGAAGCTGTCGCTCAGGCGTATTGGAGTGAGGGGTGGAGTCCAGGCCACCCCTCGGTTGTTATGTCCTAACGAGCGTCAGCTACTGAGCCGGCTCGTTTGAACGCCGTCGGTTCGACGGCAGGTGACAATTACCGATAATGTAGTATAACCTTTGGGTAGTAAACTACGATACAGTCGTAGTCGAAAATACGCGAGGGCGATAACTTCTCGATTTTTGCCGGTTATTCTGAGGGTCACCGAGTTTCAGACGAACCCTCATGGGGTTGAAGCCGTCTGTTAGGTTCGGCGTACTGGATGCTAAACGTAGTGGTATTCGCTTTTCCGCATAAACCCCCCAGTTGTATAATCGCTTGAGGTGTCCTCGAAAACATGAGCGAATCCGGACCCGAATCCGCGGGAATCTATGCTCGCGTCTCGACAGCCGATCAAGACGGTGGCCGGCAACTG # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.17, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGATGGACCCTTGTGGGGTCGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //