Array 1 59356-59155 **** Predicted by CRISPRDetect 2.4 *** >NZ_WADU01000003.1 Helicobacter pylori strain MHP17 accn210.4948.03_3_107445_cov_19.942817210.4948, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================================== ========================================== ================== 59355 42 97.6 33 ......C................................... TACTTTTATTTGGTTATTAGTCTCTATATTGCT 59280 42 100.0 42 .......................................... TGTCTTTTGTTTTTCTTGTTCTGTCTTTTGTTTTTCTTGTTC 59196 42 97.6 0 .....................C.................... | ========== ====== ====== ====== ========================================== ========================================== ================== 3 42 98.4 38 TGTCTTTTGTTTTTCTTGTTCTGTCTTTTGTTGTTCTTGTTC # Left flank : ACATCAGCAAATATTTTTTGAATGAGCAAAAGGCTTTGAGAGGTTGAAAGGTGGGCTTGGGGGTCTGGTTTTAAACTCCTCATTTCAAGCATTTTAGCTTGAGCTTTAGAGCGTATTTTTAGATTTTCTTTTTGCCATTCTTCTGTAGCTTTAAAATCTCTAGGATCTAGTTCTAAATAAGCGATAGAACTTGGTTTATAAAAATCCACTTGTTTAGCGATAGCTTTTTGTGAATAGGGCAGAGATTCCAGCTCTTTTTGCAAATAAGCTATAAGCTCTTGCGCTTTTGATCCTCTTTGAGAGCGGGGCTGTTTAGAGTTTGGGAGGTGTTTTGGCTGGATAGGGGTTTGATTGGTTTTTGTGGGTTTAGGGGTTTTGCATTCAGCTTCTACTTCTATAGCAATACCACCCTTAATTCCTACTTTTTTAATAAAGAATTGATTATGATTTTCTTGGCAATTTTGTTCTGCTTTTGTAACCAAATCTTTTTGCGTATTATT # Right flank : CAATTCTATCCCACTCTTGTTTGCTCTATCCCTAGCATTTTCAGCTTCCTTTTGAGTTTCAGCCACTTCCTTTTTGGATTGGTCATCAGCAAAACACACATTCATAAGCATGGCTGTTATCGTTGTTACACCTATTGCTGAATTAAACCATGAGTTAGGATGCGTTTTTAAATAATCATCCGCAGTCTTAACATTCCCGCATATCCAATTGCTTTTTTTAATTTGTTTTTTTATCGAGTCTTTTATCGCCTCCCAAAAAGCAATCCCCATTATAGACACTCCCACATTCTTAAAAACTTTCTTTTCTTTTGCCGTTTTTCCTAATTTCATCATCATTGTTGCAAGCATTACTAAAACCCTTATAATAGGCATTTAAATCCTTTCAAAAAACAATCTCACCTTTCAAAATCTTATTATTGTAGTGTATATAGCCATATTTAATCGCTATTAAACAATTGGTTTGAAAAATTGTAAGGGTCAATCCAATCAGATTTTTCTAA # Questionable array : NO Score: 2.59 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTCTTTTGTTTTTCTTGTTCTGTCTTTTGTTGTTCTTGTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //