Array 1 31616-32313 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJWM02000002.1 Klebsiella pneumoniae strain CriePir29 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 31616 29 93.1 32 ............TG............... TGGTGCTCTCAACCGTCACCCGCTGGCTGGAA 31677 29 93.1 32 ............TG............... CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG 31738 29 100.0 32 ............................. TGTGTGTTGGCGTTCGTTAAATATTGTTAGTA 31799 29 100.0 32 ............................. CAGGTTATACTGGCAAAACGTCGATGGCTCTC 31860 28 93.1 32 ..........-..T............... TAAATCAGCAAATATTGTTGTCTACCGTGTCG 31920 29 93.1 32 ............TC............... AGCAAATCGAAAATCCGGCTGTTTGAAAAATG 31981 29 100.0 32 ............................. TGAGGCTGCTGACGGAGAAATGGGACCTGTTC C [31992] 32043 29 96.6 32 ..............C.............. CCGACCCGGTGCCCAGGAGAACTGGCTGAATA 32104 29 93.1 31 .............G.A............. TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 32164 29 93.1 32 ...C......................T.. CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC 32225 29 96.6 32 .............T............... GGCATGAGCGAGAACCACTGCGAGAGTGTGGT 32286 28 89.7 0 ..........A............-....A | ========== ====== ====== ====== ============================= ================================ ================== 12 29 95.1 32 GTATTCCCCCCGCATGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA # Right flank : ACATAGAAACCGCAATGGTGGGGCTTTTGTCATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCCTGGATAACCCACTTTCTGCCATCTTTTGTCTCAAAGGGTACTCCCACCGTGGCAGGTGGGAGGGGAATTTGAATTGACGCGATAGCGTTAAAGGAACATTTAGCCGCGCTGGTGCTGAATGTAGCGCTTTACGACTTCCAGCGGTGCTCCACCACATGACCCAACAAAGTAACTGCGTGACCAGAGAACAGGCTTACTGTACGCCTCCCGCAAATCCAGAAATTCATTCCGTAGCCGCCGACTTGTGACGGCTTTCAGGCTGTTAACCAGTTTTGACAGTTGCACAGTTGGTGGGTATTCGACCAGCATGTGAACAAACAGTTTTAAACAGAACCAAAGCAGACTGGCAAGGTTACAGCGCCAGCTTGCCCGTAAAGTGAAATTCAGTGCGAACTGGAAGAAGCAGAAAGCAAGAA # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGCATGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.60,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1133522-1130872 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJWM02000001.1 Klebsiella pneumoniae strain CriePir29 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1133521 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 1133460 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 1133399 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 1133338 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 1133276 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 1133215 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 1133154 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 1133093 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 1133032 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 1132971 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 1132910 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 1132849 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 1132788 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 1132727 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 1132666 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 1132605 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 1132544 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 1132483 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 1132422 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 1132361 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 1132300 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 1132239 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 1132178 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 1132117 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 1132056 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 1131995 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 1131934 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 1131873 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 1131812 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 1131751 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 1131690 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 1131629 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 1131568 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 1131507 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 1131446 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 1131385 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 1131324 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 1131263 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 1131202 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 1131141 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 1131080 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 1131019 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 1130958 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 1130900 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //