Array 1 5773-6776 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SSCB01000052.1 Klebsiella pneumoniae strain CrA10i NODE_52_length_7232_cov_43.1968, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
      5773	    29	 100.0	    32	.............................	GCTGTCAGTACTCAACGTTATAGAAATTCCTC	
      5834	    29	 100.0	    32	.............................	GAGTGAAAGTGATAGCAAGAGTGTAATGGCTA	
      5895	    29	 100.0	    32	.............................	GCAACTATTGCCTGCATTGCTGTAGACAAATC	
      5956	    29	 100.0	    32	.............................	AATCAATACGCCCTGATGCTTAAAAATGGCCG	
      6017	    29	 100.0	    32	.............................	AGCAACGTTTCCGGATTATATGGCTGGAACGT	
      6078	    29	 100.0	    32	.............................	TGGTGCTCTCAACCGTCACCCGCTGGCTGGAA	
      6139	    29	 100.0	    32	.............................	TGGTGTTGTCCACGGTTACCCGCTGGCTGGAA	
      6200	    29	 100.0	    32	.............................	TCGTGTTGTCCACGGTTACCCGCTGGCTGGAA	
      6261	    29	  93.1	    32	............CA...............	AGGTATTTGACCTCATCCAGAAAGGCACAGAC	
      6322	    29	  93.1	    32	............CA...............	GCACCCTCACGGATACCTTTTGCACAGTGTTA	
      6383	    29	  89.7	    32	............CA..............C	CTTAGAGAAGCAAAAACCCCACCGAGGCAGGG	
      6444	    29	 100.0	    32	.............................	CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG	
      6505	    29	  93.1	    32	............CA...............	TGTGTGTTGGCGTTCGTTAAATATTGTTAGTA	
      6566	    29	  93.1	    32	............CA...............	GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT	
      6627	    29	  96.6	    32	..............A..............	TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA	
      6688	    29	  89.7	    32	............CA...........A...	CACTACCAGATCCGAATGGACACCCGTAATGA	
      6749	    28	  82.8	     0	............CAC.......-.....A	|                               	
==========	======	======	======	=============================	================================	==================
        17	    29	  96.0	    32	GTATTCCCCCCGTGTGCGGGGGTTATCGG	                                	       

# Left flank :   GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA
# Right flank :  CATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCAGGATAACCCACATTCTGTCAAATCTTGCAGGTTGCAATCAGCAAAGGCCTTACGTCGATAAATTCATGCCTTGAGCTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGGTAGGGCGGCATTCCTGCTTTAAAAACAATCAATAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGATCCAATTTATACTGGTTATATATACAGTGTGCGCCGGGAGACCGGTTAGAGATCAAGGGGTGAAAGTCCCCGACCATTGAAGGACCAGCAATCCACAAGGTCCCCGAGTCATGCGTTGCATACCGCGAGGTATGGGGCGAAGCGTTGACAG

# Questionable array : NO	 Score: 5.95
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGTGTGCGGGGGTTATCGG
# Alternate repeat :   GTATTCCCCCCGCATGCGGGGGTTATCGG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.10,-12.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-12] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.18,0.74   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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