Array 1 169812-172461 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIPRE010000007.1 Klebsiella pneumoniae strain 2019_OU_BfR0019 contig00007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 169812 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 169873 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 169934 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 169995 29 96.6 33 ....C........................ GAAACCCCATCAGATGACCCTCCCCATGTTGGC 170057 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 170118 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 170179 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 170240 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 170301 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 170362 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 170423 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 170484 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 170545 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 170606 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 170667 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 170728 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 170789 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 170850 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 170911 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 170972 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 171033 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 171094 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 171155 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 171216 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 171277 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 171338 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 171399 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 171460 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 171521 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 171582 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 171643 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 171704 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 171765 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 171826 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 171887 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 171948 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 172009 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 172070 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 172131 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 172192 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 172253 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 172314 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 172375 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 172433 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //