Array 1 80914-82100 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHQXP010000024.1 Klebsiella pneumoniae strain 20180291 20180291_contig_24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 80914 29 100.0 32 ............................. CGTCCAGCAGGGCGCTTTTTATTTGTTAATGC 80975 28 96.6 32 .....-....................... GTGCCGGTTAAACCTACGAGGGAGATTCTCGA 81035 29 100.0 32 ............................. GGCAAATCAAGTTGCACCGAGATCGCCGCGCG 81096 29 100.0 32 ............................. TGTTGCAGGGCTGGACCCCCACCCCGGCGAAT 81157 29 100.0 32 ............................. CGGCGCCTCAGCTTCTCGGTCGTTTGGCTAAA 81218 29 100.0 32 ............................. GAAAATTCGAGTAATTTTCGGGGGATTTCGTG 81279 29 100.0 32 ............................. CTGATCCCCTCCAACAACACGCCAGGCACAGC 81340 29 100.0 32 ............................. CAGGCAACTATTGAAAGTTACGGCATCTTACA 81401 29 100.0 32 ............................. CTATGTGCAGGACTTGTTTGGGATGGAAATGC 81462 29 100.0 32 ............................. GTGAGAAACATCTGTGCTGACCTGACAATCGC 81523 29 100.0 32 ............................. CTGCGCAGCGCATTAACCGTATTTTCAGTAAT 81584 29 96.6 32 ...........C................. CCTACGATTTCGGCTTTCAAGAGTTTTTTCTG 81645 29 96.6 32 ........T.................... TCCGTAAATAACGCCAGAATCGGTATCTTTTA 81706 29 100.0 32 ............................. ATGGTTTACGGGCTGTTCGTTTTCGAGCTTTC 81767 29 100.0 32 ............................. CTCAAACCCGTTATCGCGGCAATGATTAAAGA 81828 29 100.0 32 ............................. TTCATTGTTTTCTCCGTATTGAGTGCGGGTAG 81889 29 100.0 32 ............................. CTCCTCCATGGGCGAACTAATGACGACGCTCA 81950 29 100.0 32 ............................. CCAGGCGACCGTATCTGGGTGCGTGAAACGTG 82011 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 82072 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 20 29 98.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGAACCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTATTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGTTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCATCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGTGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //