Array 1 9501-7788 **** Predicted by CRISPRDetect 2.4 *** >NZ_UXFI01000055.1 Flavobacterium psychrophilum isolate 51-SE556_S6_R1.fastq.gz, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 9500 46 71.7 29 A.AA.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG T [9496] 9424 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 9348 46 100.0 30 .............................................. AGGACGATTATAAATTTATGCTAAATATTA 9272 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 9196 46 100.0 30 .............................................. AAAAACAATATCGAAAAACTGAAAGAGAAT 9120 46 97.8 30 ....................G......................... TATATCCGTGTTTGAATACACATTGCCACC 9044 46 100.0 29 .............................................. CGTTTTCGCACGTGAAATCAAAGTACTAT 8969 46 100.0 30 .............................................. TTTTAAAAAATTGTTAAGTAGGAAAACTTA 8893 46 100.0 30 .............................................. TCCAGTAAGCGAGATGTCGTATATCAAAGT 8817 46 100.0 30 .............................................. AGCCAATGCCTTGTGTCCTGTTATGTGTTC 8741 46 100.0 30 .............................................. AAAAGATTTAGCAACATAGATGATTGTTTT 8665 46 100.0 28 .............................................. TTTTAATGGTTAAGTAAAGAACTGTAAT 8591 46 100.0 30 .............................................. TAATAAGTTGCGCGTTTCCGTTTATTCCGT 8515 46 100.0 30 .............................................. AGTAGGTAATGTATTCACAATAGACACATT 8439 46 100.0 29 .............................................. AAAACGAAATACATACAGCGCACGCATTC 8364 46 97.8 30 ............................C................. AGGCACTTCTTTAGACTTAAATAAGTCTTT 8288 46 100.0 29 .............................................. AGTAATAGATGGGGGGTTTGAATGCCGTA 8213 46 100.0 30 .............................................. TCATCATCTGATGAAAATTGCTGTTCAATA 8137 46 100.0 30 .............................................. AAGCAAAATAAAATAAAAGAAATATTTAGC 8061 46 100.0 30 .............................................. AATCAAAATAAGGTTTTAAAAGCGGCTTGG 7985 46 100.0 30 .............................................. AGGGCTTCGATTTTCTCGGGTTTCCATTTA 7909 46 100.0 30 .............................................. CGGTAACATCGATATAACTTGCGAGCTGGT 7833 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 23 46 98.6 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : TTTGCGTGGTACATCAAATTAGAAACGCTTGTAGATATGTGGTATGGAAAGACAAAAAACAATTTACAACCGATATGAAACTTGTTTATACAGCACCAACAAAACAAGCTGCCGCATTAGCTTTGGAAGATTTTGCTCAAAAATGGGAATCCAAATATGGTTATGCCATCAAATCCTGGAGAGAAAACTGGGACGAATTAACCGTGTTTTTCGACTTCCCGCTAGAAATTCGAAAAATAATCTATACTACAAATTTAATAGAAAATTTAAATGGAAAAATTAGAAAATACACTAAAAATAAAATGTCATTCCCTACTGATGATGCGGTTCTAAAATCAGTTTATTTAGCTTTAAAAGAAGCAACAAAAAAATGGTCAATGCCAATACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCATCAA # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTATGTACTTCGGCATTTTCTCTGCTGGCACAAAATCGTATATAGATCGAAAACTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTAGGTAAGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCAA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //