Array 1 61454-58852 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMVW010000001.1 Flavonifractor plautii strain D40t1_170626_H4 NODE_1_length_501170_cov_24.2835, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 61453 33 100.0 34 ................................. CAGTAATCAGGGCTGTCGATAAGCCCAGCGGCAG 61386 33 100.0 34 ................................. GTCTACATGGTCGGCCAATGCCTTACGCGGATTG 61319 33 100.0 35 ................................. GCCACGTCGGCTTTCAGGCCGTCCACGGTTTCGGT 61251 33 100.0 35 ................................. TTTAAATTGTCCTTTTTTGGACAGCAAAGAAAGAA 61183 33 100.0 35 ................................. TCGGTGAGCACCCCCGGAAAGGTCTGTACCACCGC 61115 33 100.0 33 ................................. TTTCTGGGAGCACAGCAAGCCCAATCTCTATAA 61049 33 100.0 35 ................................. TTTTTCTCTCTCCCGGTTTGCTAGACTTTGCTACA 60981 33 100.0 34 ................................. GATCTGCCGGACGGCCGGATCGCGGTAAAAATGC 60914 33 100.0 35 ................................. AAAAGCACAGAGATACAGGTCTATGATGTGGTGCG 60846 33 100.0 34 ................................. TGGTGGAATCGATATCAACTGACAGGAGGAAAAG 60779 33 100.0 36 ................................. TTTAAGGCTGGGCCATGTGAACGATGCTCATCCAAG 60710 33 100.0 34 ................................. TTTCGCCTGTTGAAATACTAAATCCACCTTGCTT 60643 33 100.0 33 ................................. CGCATGCTGGGGCATCCCTGCTGCTCTCCCAGT 60577 33 100.0 37 ................................. CGGCGTGGGAGACTGTTTTGGAGGCAGGAGAGGAGCT 60507 33 100.0 34 ................................. TCTGTTTGTCATCAGCAACCGACCTCCTTGAAAT 60440 33 100.0 34 ................................. CTCCTTCACATGGCGGGGGTAGCGGCGGTGCAGC 60373 33 100.0 33 ................................. TCCTGGGCCTCCGCGTCAAGCTCCGCCCAGCTC 60307 33 100.0 35 ................................. TCAGTGAAGTAGGCCGCCCTGCGGGCCTTGACCCA 60239 33 100.0 34 ................................. CAGGAGAAGATGGACGTCTATCTGGCCGCCGACC 60172 33 100.0 36 ................................. CCTTCTTTGTGCGGCAGACCAGGTTACAGGACACGC 60103 33 100.0 33 ................................. CCAGGTCAGGCGGCGGAGGCCGCTTCGTGCCAT 60037 33 100.0 34 ................................. ACGGGCGGCCTCGTCAATATCATCTGTGGGCCAA 59970 33 100.0 37 ................................. GGAGAAGGGGATCATGGCCGGCCGGGACGCCGATGCC 59900 33 100.0 35 ................................. TGGCATTTGGTGATGTAGTCGGCCAGCTCCCGGCC 59832 33 100.0 34 ................................. CGGTCAGTAATCCAGTGCAGGCCCTTCCGCCGGG 59765 33 97.0 36 .............................G... TACCGTGGACGACCACGCCATTGTCCAGCACCTCCC 59696 33 100.0 34 ................................. CTCGTTCCAGCGATCGACGGAACTTGGTGATGAC 59629 33 100.0 36 ................................. CGTAATCGTACTGGTCAAACGCCGACACAAACAAAG 59560 33 100.0 35 ................................. TGGACCGGGTGTCCAAACATCCACGGCTGCACCTC 59492 33 100.0 33 ................................. GTACATGTCACGCAACAGTGGGTGGATATCCTG 59426 33 100.0 35 ................................. TGTGTTTTGGGGAGCTCTGGCTGTGGGCAGCGTGA 59358 33 100.0 35 ................................. AAAGAATCCGCCTAGCATGATCCCTTTTGTGGGCG 59290 33 100.0 33 ................................. CTGACATTGGCTTGAGCCGTTGAGGTTCTGGTC 59224 33 100.0 35 ................................. TCCGCCGTCTTGGTGAGCACCACACCCACCCCCTG 59156 33 100.0 34 ................................. ATGCTTGCTCCTCCTTACTTCCGGTCCGCCAGCG 59089 33 100.0 35 ................................. GGAACGCAGGCCGAGCGAGTACACACCAATAAGGA 59021 33 100.0 38 ................................. AGTGAGAAATACGACATCACCAAGCATCCCCGGTATAA 58950 33 93.9 34 ............A............G....... CAGCGGCTGGACCGCGGCCACATGGAGTATGTCT 58883 32 93.9 0 .................-.............C. | ========== ====== ====== ====== ================================= ====================================== ================== 39 33 99.6 35 GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Left flank : GGACGCCTATCCGCCCTTTTTGTGGAAGTGAGGCCATTATGCTGGTTTTGATTACCTACGATGTCAATACAGCGGATGCCGCCGGGCGCAAACGCCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAGCGGGTTCAGAACTCCGTCTTTGAGTGCAAGCTGGATCCGGCCCAGTACAAGCTGCTTCAAGCCAAGCTGTGTGCGATCATGGATCCCGAACGGGACAGCCTCCGCTTTTATTCCCTGGGAAATCGCTATGAGCAGAAGATCGAGCACTTTGGCTTTAAGCAGACCTACCTTCCAGACGAACCTTTGATTTTGTAGCGTGCGAAGTCCAAGATGACACGCCTTCTCCGGCCGGTTCGCACCCAAAAAGCATAAAGGAAAGCTTAATGGAGCATAGGCGCGTTTGTTTTTGTATGCTCAGCCTTCTTCCCCTTGTGCAAATAAGCAAATTGAGCCAAGCAAACTCTCTGCTCTTTGGTAAAGTTTGCT # Right flank : GTCTTACAGGGGCGCCTGGTCAGTTTGCAGGAGACGCCGCATAGGGGCGCGGGTCGATTCAAATTTTCACCCCGCGCCCCTGCTGTTTGCGTTTCTTTTCGTTGACTGGTATAGTAGGGAATGATATAATAGGATGATTATGACAAAAACTATGGTGGGAAGATCATATTATGTGGATTTCAAGTGACTGGAAGGACTATGAGCTGCTGGACTGCGGCGGCGGCGAGCGTCTGGAGCGCTGGGGCAAGTATCTGTTGGTGCGGCCCGATCCTCAGGCCATCTGGCGTCCGGAGGGGCGGCATCCCGGATGGCGGAGGCACGACGCCCGGTACCAGCGCGCCTCCACCGGAGGGGGCCAGTGGGTCAAGAAGGAACTGCCCCAGCGCTGGACATTGGGTTACAAGGGGCTGACCCTCAACATCAAGCCTATGAACTTCAAGCACACCGGCGTCTTTCCGGAGCAGGCGGCCAACTGGGATTTCGCCATGGAGCGCATCCGT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //