Array 1 70633-73282 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACYPK010000006.1 Klebsiella pneumoniae strain CFSAN059630 contig00006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 70633 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 70694 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 70755 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 70816 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 70878 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 70939 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 71000 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 71061 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 71122 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 71183 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 71244 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 71305 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 71366 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 71427 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 71488 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 71549 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 71610 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 71671 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 71732 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 71793 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 71854 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 71915 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 71976 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 72037 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 72098 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 72159 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 72220 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 72281 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 72342 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 72403 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 72464 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 72525 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 72586 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 72647 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 72708 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 72769 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 72830 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 72891 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 72952 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 73013 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 73074 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 73135 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 73196 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 73254 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //