Array 1 341410-340186 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAARQJ010000001.1 Listeria rocourtiae strain FSL L7-1621 NODE_1_length_362461_cov_36.126951, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    341409	    36	 100.0	    30	....................................	AGGCAATTATGCCTGTGTTGATTTCAATAG	
    341343	    36	 100.0	    30	....................................	TATTCAGCAGGAACAGCTAAGCCGCAATAC	
    341277	    36	 100.0	    30	....................................	GTTCCCATTGATGGATATCATGGGCGATGT	
    341211	    36	 100.0	    30	....................................	GCCAAAGTGGATTATGTAAGCGAACTAGTC	
    341145	    36	 100.0	    30	....................................	AGAATACTAACTTATTCGCCCACATTGGAA	
    341079	    36	 100.0	    30	....................................	TTCATTTTCTTTCACAAAACCGTAAACATA	
    341013	    36	 100.0	    30	....................................	TTATTATTAATCCTACAGGTGTCGCAACTG	
    340947	    36	 100.0	    30	....................................	TGGGCATAAAGTCTCAACACCTGATGTTAA	
    340881	    36	 100.0	    30	....................................	GAATACGCCCTATACAAAGGCGACACACTG	
    340815	    36	 100.0	    30	....................................	TATTGCGTACATCACGCCTCACCCTTCCTC	
    340749	    36	 100.0	    30	....................................	TTTTCAGGCGGGTTATTGCCTTGCATCCTT	
    340683	    36	 100.0	    30	....................................	ATTGCTGTTGCTGTGATTGTAACGTCATTT	
    340617	    36	 100.0	    30	....................................	GATTATAATCAATTACCGTTTTCAGGGGGT	
    340551	    36	 100.0	    30	....................................	TGGATCGCTGAGTATCGACGTTTCGCTTAA	
    340485	    36	 100.0	    30	....................................	CAAAGCGCAGAAAAGCAAAAAGAAACAGTG	
    340419	    36	 100.0	    30	....................................	TCTTGATGTAGATGGGATACCTCTAGAACT	
    340353	    36	 100.0	    30	....................................	TACAGACAAGGGGGACGAAGATTTATGACA	
    340287	    36	 100.0	    30	....................................	GGAAACGGATAAACTGGCAGATGCAAACGG	
    340221	    36	  91.7	     0	...........................T.T....G.	|                             	
==========	======	======	======	====================================	==============================	==================
        19	    36	  99.6	    30	GTTTTAGTACTCTCAGAATTTTAGCTACTGTAAAAC	                              	       

# Left flank :   ATACGTTGCATTATGATGAATATGAAAAGATTATGAGGCAAATAGAGATTTTAACAGAGAAACACCCACATTTTTTTAGTATTATATTTCCTAGTCAGATTGGATATGTTTATGTGAGTGAGCAGTATATTGAGAACATTTTAGTTGCGGGGCGGGAAGTTAATGCATTAGTTGAAAGTGAACTCCTGTATGAGCGGGTACGCAAGAATTATCCGGATATCTCTGTGCCAAGTTATGATGATTTTATGAATTACTTGAAGGTGGTAGCGCCATATCTGTTCACAAATAAAAAACAAAGTATTCAAATGTCTCTGCGTGAATTAGTGCTGATTAAGATTATAAACGAACTATTTCACTATTATGATTTTGAGGCAGGAATGGTCGATACGTATACACAATTGGAGTATGACTTCTTATATAGCGAGTAATAGCCGGATATTGTAGCCTATGTTATAATGGAGGAGCAGTAGTTTTTACTAGTAACCTTAGCATGATTTGAG
# Right flank :  ATAAAAAGAACGATGTATCACGGGAATGTGGAGTTCGTTGAAAAGATAAGGGTTATTTTATTTATCGGAGTATGAAGGAATGATTTTAATATTAATAAATTTACAGTTATTATCTAGTTAACAGATAATAGCTTTTTTTATTTGTTAAATAATAGTCTATTAAAGTAAAAAGATATACAAAAAGACTAAATAATGGTTATAATTAGACTTGTCTAATTATTTTTGATAAGGTTACTGAGAGAGGTCCGTAAAATAAGAATATAGGAGAGGATATAATATGAGCAAAATAACTAAAAAAATGGTTGTAGTGATACTCATTGGCATACTATTTATAAGTATGAGTTTACCAGTAACAAAGACCTTTGCTTATAACATCGAATGGTCAAATCAATATAGATTTTATAGTCCGAACGATAGAACTCCATCGGCTACGAAATGGACCAAATCATATGTATACATGAATACAAGTAGGATAACACCTAGGTTTCATTTTAATTCTT

# Questionable array : NO	 Score: 3.24
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTCAGAATTTTAGCTACTGTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.30,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.41   Confidence: MEDIUM] 

# Array family : NA
//