Array 1 1609461-1606676 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014334.1 Fervidobacterium islandicum strain AW-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================================================================================== ================== 1609460 29 100.0 39 ............................. TATGAAAAGTTTGAAAGTTCCGTGTTTACAAGGTACCAA 1609392 29 100.0 38 ............................. GAAAGAGCAAGACGATGTGAACATTCTTAAGCTCACGT 1609325 29 100.0 35 ............................. TTTGATAAAACAGCAAGCGTTCAAGCACCAATTCA 1609261 29 100.0 36 ............................. AAGAAGCACTAAAGGAATATGACGTATTCAAAGCAG 1609196 29 100.0 37 ............................. TATAACGAATTCTATAGCGCACAGACGTATAATTATA 1609130 29 100.0 35 ............................. TCGCCCAGTTTTTGCTCTTAAAAAGAGCTATCAAA 1609066 29 100.0 38 ............................. CTGCCAATCCAGTTCTTTGCCCAGCCTTCAACTTGCAA 1608999 29 100.0 36 ............................. GTGCATTAACTTTCGCACTGCTACCAGAAGGAATAG 1608934 29 100.0 38 ............................. AAGTCGTATTCTACACCAGTCCAGCTTGTAACATTAGC 1608867 29 100.0 36 ............................. CGGCTAGCACAGCTGCTCTTACAACAGCTTTAGCAA 1608802 29 100.0 36 ............................. CGTGTTTAACAGTGTTGCGTTGATGTCGTATTTTCT 1608737 29 100.0 39 ............................. GATACCTCAACGGGATTTAACAACGCAATACCCGTCCTT 1608669 29 100.0 39 ............................. TTGAAACTAATAGTATAGAAGTTACCATCACGGATCCAA 1608601 29 100.0 36 ............................. TAGAACTTTGGATTGGTAACCGGTTTGCCGGTGTGA 1608536 29 100.0 37 ............................. TCTTACAGAAGATGGAGTCTCCTGCGCTGGCTTATGA 1608470 29 100.0 35 ............................. ATTAGTAACAAATGCCATCCAAAACACACTGTATA 1608406 29 100.0 36 ............................. AGGTGATCTTGATGCTCGTTTGCTGCTGGCTGAAAA 1608341 29 100.0 37 ............................. TCCGCCAGACCATCACCGTTGCTATCCACGCTAAAGC 1608275 29 100.0 37 ............................. ACAAACGGTCTCTACAGGCATTCCTATGCTCACCAAT 1608209 29 96.6 36 .........................T... CTATGAAGGCGACAAACGTGTGCTTGACGAAGTCAA 1608144 29 100.0 36 ............................. ATCGCAAATACAGAAGATTATAGAAGTCAAATTCAA 1608079 29 100.0 38 ............................. TTGTATAAAAATCTTTCTGAAAAGATTACATTAGCTGT 1608012 29 100.0 36 ............................. TTTTGTTATTCCAGAAGGTGTAAAAAATTGTTTTAA 1607947 29 100.0 36 ............................. GCCTCTTCAACGGATTGTCTGTGTCTGTTACAGTAT 1607882 29 100.0 39 ............................. AGAGAAAAGCTTAGTCAGATTAACGAGCTCAGGCGAGGA 1607814 29 100.0 35 ............................. TTAGTGGTTCTGTATACAGCGTATCTGTCGTCCCA 1607750 29 100.0 35 ............................. AGGCATAGACGTCCCACTCCTCATCGCCTTTATAA 1607686 29 100.0 36 ............................. TGTTCTCGTATAAACCGAGAAAGTCGTTTCTAACCA 1607621 29 100.0 35 ............................. TTCTAAGTATTCCAGCAAGTCCAAGAGCGATGATT 1607557 29 100.0 37 ............................. ACTTGGTCAACAAATTTTCCGAGTTCTTTTTTTGCGA 1607491 29 100.0 37 ............................. AAAAGCCGGCATGAGAGTTGGGCAGAAGCTGCTGTTA 1607425 29 100.0 36 ............................. TAGTAATCCAAGTGGGTAGTCCGGGTAGGTAATTCG 1607360 29 100.0 36 ............................. TGTAACCCGAACCGAGATAGAGTTCAGAGTGAATGT 1607295 29 100.0 37 ............................. CAGTTAGATGGGCTTGTTGGTCAGAGACCGAACACAA 1607229 29 96.6 36 .........................G... TTTGTTCGTGAGTATGAATTAAAATCTGTAACATAT 1607164 29 96.6 38 .......................T..... TTCGTTGAAGCAAAAAGCAAACTCGAGGAACAAATCAA 1607097 29 96.6 38 ............................G AATTAATGGTTTGATTAGCTTGTAGTCCAGATCTTGTG 1607030 29 93.1 36 ...T..............A.......... AACAACTTCTCGTTCCTCAGCAAGTTGGAAAAGAAA 1606965 29 93.1 36 ...T.......G................. GCGAGATAGAAAGCCTGGTGAAGTCAGGGAATTTTG 1606900 29 96.6 36 ...............C............. ATGGCTTCGGTGATACAAGTTGCTGGTAGGTGTAAC 1606835 29 93.1 102 ..C......................C... TTGGGTAACGTTTTACATCATCAACCGTCCATCGTGTTCTTTTTTATAAGTATTTGGATGGAAAGACTACACTCACTGAGCTTCAGGGTGCAAATTTTGGTC 1606704 29 75.9 0 ...T.....G...CTG...C........G | ========== ====== ====== ====== ============================= ====================================================================================================== ================== 42 29 98.5 38 GTTCTATATTAACTATGTGGGATGTAAAT # Left flank : GGCGTGGTGGTAGCTTGTTTGTAATAATTACTTATGACATTGGTGAAAAGAGAATAACGAAAGTAAGAAAAATTATACGCAAGTATCTGTTTTGGGTTCAAAATTCGGTTTTTGAAGGCGAAATAACAGAGGGAAAGTTGCAAAAGTGCATAAACGAAATAAAGAAAGTAATTATAGAAGAGGAAGATTCTATTTTCGTTTATAAAATATACGGAAACGGTAGATTTGAGAAGAAGATAATTGGACTCGAAAAAAGTGTTAACGACGAATTCATATAGCCAACAACCAGTGCAGCGAACTTTCTCCAGTAAAAAAAATACCAGAAAACACTGAATAGATCGATAATTATCGATTATTTTTTTGAAATTTTCTATGTACTGACTTTTGGTTTGCTGCTCATGACACCATTTTCAGTTATCTTATCACTTGATATACGACGGCTTATAAAGTATCTTCCGAATTTGTTTTGATTAGGATAAAATTAAGTACTTTGTGAAACT # Right flank : TTTGATGCAAAATAGTGCTAAAATCATGTCAAACAAGACGGTATATTAAATATTTAAGACGTAAAAAAAGTGAAAACTTATATGAGCTTGCCTATTTATAGGTACGTTCAGTCTGTTGAAACTTGCATTTTTTATACAAGTCTGCTGGTTTTTTCGGTAAGTGTATGATATGATACAGTTGGAAAAACTTTTGATCGTGCCTATAAGGGTTTAATCATCCAAACAAGCAGGGTTTTTGCCCTGCTTGTTTTTTGTATTGTAAGATGAAAGATTCCTCTCGTTATGGTATAATATTCTCAAAGCGAACTTTGTATGCTGTGAGGAGGAATCATCAATGCGTATATTGAGCGGTATTAGGCCTACCGGAAAGGTTCATATTGGTCATTATGTGGGTGTTTTTGAGAATTGGGTAAGACTCCAGAACGAAGGGCACGATACTTTTTATTTTGTTGCCGATTGGCACGCACTCACAACGCACTATGAAGATACCAGCGAATTAA # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.13, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTATATTAACTATGTGGGATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 1624900-1622584 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014334.1 Fervidobacterium islandicum strain AW-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================== ================== 1624899 35 100.0 40 ................................... GATGACTATGAGTAGCTTGCCTAACCGTTTGCAGTATATA 1624824 35 100.0 42 ................................... GCCATCCAGTCCCATCAGCATCTGATTGCCAGTTATGTCGAT 1624747 35 100.0 40 ................................... GCAGTGTATCACCTCTTTCGAGGGACACACTGATCCTGTT 1624672 35 100.0 42 ................................... GATGGTATACAGACGCAGAAGATGGCAAAGCTAATAGCACGC 1624595 35 100.0 42 ................................... GTGATATCCTTGAGTTTCTACATACGAATCTTCAAAAGTTTC 1624518 35 100.0 42 ................................... GTGTAATCTAATTCGGTGATTATCCGCGCAGCCAACTGTCTT 1624441 35 100.0 42 ................................... GTAAATCTACATTTCCAATATACTTGTTCTTGAACTTTATTT 1624364 35 100.0 42 ................................... GGTTGGGAATCACCTCGATTCCCAACATCTCACTTACTACGA 1624287 35 100.0 39 ................................... GATTTCTATGGCTTTAAGCATGGGTTCTCTCAGGTACGA 1624213 35 100.0 42 ................................... GCACTCGCCGTCGTGGCGCGCTAATTCTACTAATTCATTCAT 1624136 35 100.0 42 ................................... GCCGCCGCATGGGGTTTCACCTCCTTTTTTTATTTTTTTTGC 1624059 35 100.0 41 ................................... GGTAACTTTCGAATGTTGGTACTACCTTGATAGTTTGCACC 1623983 35 100.0 41 ................................... GGTTTAATCTTGATTCGTACACGTACCACAAAATAATAAAA 1623907 35 100.0 42 ................................... GGTGCCCTATTGCAGACTGGTAATCACCAGTCTGCAACATTT 1623830 35 100.0 41 ................................... GATGTAATTTATTCCGGTTTGCCCTTCAGTGCGAGGTACTT 1623754 35 100.0 41 ................................... GCCATCTAGTTTCTTTGCTATATCAACAGGCACTCCGATTC 1623678 35 100.0 41 ................................... GGAGAGCTCGAAACAACGCATTGAGAGACGCCATTCATGGG 1623602 35 100.0 41 ................................... GTCACTTCAAAAAACCTTCTGGCTTTTGTTGGAATTTCGCT 1623526 35 100.0 41 ................................... GACTGTGAATGTGTGTTGATATTAGCTTAATGCCGAATTTT 1623450 35 100.0 42 ................................... GCCGTAAAACGTATGCAACAATCTTAACCGTATTGTCCTTCA 1623373 35 100.0 41 ................................... GCATCGCATTGTGGGATACCATTCGTGGGAATATGGTTCGA 1623297 35 100.0 40 ................................... GTTTAATCTTGTCTCGTAAACGTACCACAGAACGATGAAG 1623222 35 100.0 39 ................................... GCATAGAAACGTACCATTCATGGGAATATGGTTCCAAAT 1623148 35 100.0 41 ................................... CGCGATGCCGTCTTTAAATTCGAAAAACCTTCTGGCTTTTT 1623072 35 100.0 38 ................................... CCTGCCCATCCTGCACCCTCAAAAATCAGTGTCTTTTT 1622999 35 100.0 41 ................................... CTTTTTGATTAGTCTTACAATTCTTAAGAAGTCAGCAAACG 1622923 35 100.0 41 ................................... CTGCTTGCTGGTTTTATAAACTTTTGACTTTTCAACGAAAA 1622847 35 100.0 40 ................................... CCACGAGCATAAGTTCTGAGGGCTTCAAATACTAGAGCCC 1622772 35 100.0 42 ................................... CGAAAATAACGATTGCGAAGAATAAAATCCATACGATTACTT 1622695 35 100.0 42 ................................... CCGAAAAAAAGGTTCCTGGAGGAAATCATTCCTCCAGGAACC 1622618 35 91.4 0 ..........CAC...................... | ========== ====== ====== ====== =================================== ========================================== ================== 31 35 99.7 41 GTAGGAAAGGTGATTCTCTCTGAAAGAGATGGAAA # Left flank : CCACTCAAAAAATGCTAAAATTTGATTGTACCAAAACATCTGTTGAAACGCCCAGCATAGTGGTAGCCAGTAAATGAGATAAACTCCGAACATCGTTTATTTATCAATACCTACGGTCATTGACAACAACAAAATTATCACCTCTAATATGTCGAAAATCACGTATTTGTGCTGGTACTCGCTCATTTTTGAACTATTTTCAAAGTATGTTTTTACAAAAAGCGTTTATTCATCAGCGTTCCAAAATTTCATTCGCATCACGAACAACTTTTCCCTACCTATTGTTACAACAATATTTCAAAGTGAAAAACTAACGAACGGTTAGAATTGATGCTTATGCAAGTGGTAACAAGTCAAAGTACCGGTAGGGAATCAGCATGGATATTAGAAGATCTGCAACTGTTAGTCAACCACAAACAAATTTTAAACACGCTAAGATTGGGGGTAGGGAAAATCGCATTCCAGAATATATTTATTTATGCTTATTTTGGAAGGATACG # Right flank : CGCGCAGGTCATATATCTGAAAACCTACACATTATCGGGGAATGTGGGAGTATGGCGTTCTGGCCGTACAGAGATATCGTAGCACTCAGCGGGCTGATTGCACTGGCTGAAAGTTACGGTGTGAAGTATACGAATAAGGCTATAAGGTATTTGAAGAAGTTTAAAGATATTATCCCAATAGTAGAATTTGTGATTGATGAAGTAGTAAATGCTTTCCGTGAACCCAAGCTTTTGCTTGATACAGTGACTGATAAATACAGCTATGAAATTCTTGCTTTGTTTGTCAGCACAGACGAAGAATTTGACGAAGCATATGAGAAGATACTTTATATTTGACTGAGATATTTAGATGAGCTTGATAATTGCCGCGGGGATTTCGATGTCACGTTGCATTAATAGTCTTCATTCGGTATTACCGCACCAGACTACCAAGAGTTCAAAAGAATATTATTCAATACTATCAGTAAAATAGCTCACAAACGTGGAAGTTTCAGATTCAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGGAAAGGTGATTCTCTCTGAAAGAGATGGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //