Array 1 31092-30894 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CADN01000001.1 Helicobacter pylori NQ4191, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence            	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	===========================	=================================	==================
     31091	    27	  92.6	    27	.......CT..................	GGTGTCGTTATTAAAGCTAGTATTGTC      	
     31037	    27	 100.0	    30	...........................	ACTGCTGTTTTCAAAAGTGGATTGGGCGCT   	
     30980	    27	 100.0	    33	...........................	GTTACTATTACCAAAGCTTAAAGTGGCGCTGTT	
     30920	    27	  85.2	     0	.C....A.T......G...........	|                                	
==========	======	======	======	===========================	=================================	==================
         4	    27	  94.5	    30	ATTAAAGTGATAAGTCCCTTGATTGAA	                                 	       

# Left flank :   TCTAAACCTTGAGCGTCTGTAGCGATAGTGGTGTTTTTATTCTTGGTGTAGCCTGTATCGCTATTTGCGATCTTATTATCATTAGCAGCGTTATTTAAAGCGCTTTGGGAGTCACTCAAGTCTTGTTGGTAGGTTGCTTTAGCTTTAGCTTGTAAATCGTCCCCTAAAAATTGGGTAATAATGGATTGTTTGTTAAAGGTTTCTTGTAAGGTTTCATCTTGCCCGTCAATGTCAAAGGTTACATCATAAGTGTTATTACCCACTCCAACATGGCTGATAGCCTTATCGCCCTTATAATTGATTAGATCCCACAAATAGCTTTGATAAACCCCATACTGGATCGCCCCATTTGTAGTGAGAATGTCATAGGTTTGGTTGTTATTAAGGGTTTGATTGAGGTTAAAGATCGCATTAGAGCCAAAAGACACACTGCCTTTAAGGCTGGCAAAAGGCGAACTTGAATTTAAAGTGTTGATGCCTGAAAAACTCACCTTGCTGGT
# Right flank :  GCTCGTTTGATTAAAGGAGATGGCGCTATTATTGTTACTACCGCTGAAACTAAAACCTCCATCAGTATCATCTGTAAAGCTAGAGCCACTGACTTTGATGTTAGAGCCTTTAAAATTCATGTAAGATTTTTGTGTCCCTGCATCGCTGTTATCAAAGCTCGCTTGATTGATAGTGATATTGTTAGTCGCATTAAAATTGAGCGTGGCCCCACCGCCATCAGCGTATGAGTTTCCGGTTGTAATATGGCTAGAATTAAAATTCATCGTTTGAGCGTCATAAGTGCCAGTGATATACCCTACATCACCCCCATTAATACCTGTGCCTCCAAAGCGGATATTCCCCCCTATATCAAGCGTGCCACCATTGAATGTTTGCGTGAAACTAGCCCCACCAGCGCTATAAGTGGTAAGAGTGTTTAAATAATAAGTCCCAGAGCCTTGAGTGCTGCTAAAAAGACAATAAGAGTTGTGCGTGGGTGAATTAGGACCGCTTTCAATAT

# Questionable array : NO	 Score: 2.53
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.04, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTAAAGTGATAAGTCCCTTGATTGAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:70.37%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [4-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.41   Confidence: MEDIUM] 

# Array family : NA
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