Array 1 90750-89135 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJOV01000005.1 Gordonia spumicola strain NBRC 107696 sequence05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 90749 28 100.0 33 ............................ CACCGCCCACGACGACGTCGACACCGTCCTCAT 90688 28 100.0 33 ............................ CACGTATCCGACCGCGCCGACCGTTCTCACTGC 90627 28 100.0 33 ............................ CGCAGGGTTCCACGGGTCGGGTCGCGACGCGAA 90566 28 100.0 33 ............................ CCGGCGACTGGCGCATCGTCCGCGACGGCCGAC 90505 28 100.0 33 ............................ CGACAGCCCTGGCGCGCTCGCCGCGTGGGCGGG 90444 28 100.0 33 ............................ CGCCGACGGGCTGCTCTACATCTGGGACGGGGC 90383 28 100.0 33 ............................ CTGGCCCGGCGGATACACCACCGGGTCGACGAC 90322 28 100.0 33 ............................ CGACGACACCGCGATCGACGCCTGGCTCGGCGA 90261 28 100.0 33 ............................ CTCCTGCGCCGAATCCTGCAGGTCCACGATCTG 90200 28 100.0 33 ............................ CGCTGCGAGCGTCGTTCCGCCCGTCCCGAGGAG 90139 28 100.0 33 ............................ CTCCGTGCCGTATTCGGTCTGCACGGTGACGTA 90078 28 100.0 33 ............................ CTCGCGGACCACGGCCCGCGTCTCGAGGACGTC 90017 28 100.0 33 ............................ CATCCACTGACCGCTTGACGCGTGTCACGAATG 89956 28 100.0 33 ............................ CGCGGACGACCGATTCATTGAGCACGACGACGT 89895 28 100.0 33 ............................ CAAGTCCGCCGAGTTCGTGACCCGACTCGGCCC 89834 28 100.0 33 ............................ CTCGGGCTGAAGAGCTGCCTTAGCGGCGTCTAC 89773 28 100.0 33 ............................ CAAGCTCGCGCCGACGGCGACGTCGTGGAAGGC 89712 28 100.0 33 ............................ CCACGCTTGCCGTCTCGTATCGATGAATCCGTT 89651 28 100.0 33 ............................ CGAACCGGACCGGCTCACAACCGCCCATCAGCT 89590 28 100.0 33 ............................ CACTTGCGCCGTGTCCGACTGCCGTCGCCTGCG 89529 28 100.0 33 ............................ GTGCTGGCCGGTCAAACCGCCATCCAGCACCAC 89468 28 100.0 33 ............................ CCACGTCCGCATCGACATCGAATGAGGTGGCCG 89407 28 100.0 33 ............................ GCCGGGGAAGCATCAGTACTTCATCGGGATTGC 89346 28 100.0 34 ............................ CCAGCCGCTATACGGCTTGCACCGACGACTTCGA 89284 28 100.0 33 ............................ CCGGTGGCTAAGAAGCTGAGACCGGATCGACAT 89223 28 100.0 33 ............................ CACACCCGGCGTACCCTCGCCATTTGCGCCCGT 89162 28 92.9 0 ........................AC.. | ========== ====== ====== ====== ============================ ================================== ================== 27 28 99.7 33 GTGCTCCCCGCGCGAGCGGGGATGGTCC # Left flank : ACTTCTCGCCGTGCCAAGGCCGTCACCGCATTCCTGTCCGCGTCGCGCGACGGCGACTTCACCGCCCTCGTCGAACTCCTCGACCCCGACGCCGTGTTCCGCACCTACACCGACGACAAGCCCCTCGAACTCGTCAGCGGCGCACCCGCGATCGCCGAAGCCTTCATGTTCCGCGCGAAGACCGCGATCACCGTCCTCGTCGACGGCCGTATCGGCGTCGTGGTTCCGCACCCTGTCACCCGGCTCTACCTCGTCATGGACGTCGCGTTCTCGCCCAGCGGCGCGATCGCGTCGATCGACTCGGTGTTGCGAGCGGAGGAGTTGGCGTCGGTGGAGGTAGTGGCGGTCCAATGACGTTGCGGTGCGTTCCGCATGTTGGTCGAGCTGATGCCACAGCTCAGGCATGATCAGTACGGCGAGTTCGACGGACCTGCCTACTGCGCTTGTGCAAAGTCATTCTGAAACAGAAGACTGCCGAGTAACGTCCCAGGTCAAGAAGT # Right flank : CTCTACCTGGGACTAGTCGTCCGGCACCGGCCGTCGCAGGGCGAAAACCTGCCGCCAGCGAGGCCGCAGTCGGGGTGTCGCGGTCGGAACTCACCCGTAAAACCCATTGAGACCAATATGCGGGTCTCCTAACCTAGTCCACGACGGCCTTCACACTTCCGTTCTGGAGGTGAACCACTAGGCCGACCGAGCGAGCGGAACGTCGCCGCAATCAACTCGTTTAGGGAGTGACGACGCTGGTGCGTCACCCGGACTGTAAATCCGGCGCGAAAGCATGGCAGGTTCGATCCCTGCCACTCCCACCACCATTGTCGATGCAGTCCCGATAGCGAGGGCGCTCGGACCAACCGTCCGTCCGACCTTCGTGGCAGCATGTCCATCGTGGAGACCCACAAGCGCACGCCTCAGCAATTGTTCAATCAGCCTCAGCACTTCGTGATTCCGCTGTTCCAGCGCGCGTACGTGTGGAAGGAGGACGAACAGTGGGAGCCGCTGTGGAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2169068-2173430 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJOV01000005.1 Gordonia spumicola strain NBRC 107696 sequence05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2169068 29 100.0 32 ............................. GTTCTGGCTGCAATCCGCGACATCGACCGCGC 2169129 29 96.6 32 ............................G GCTCGCGCGAACGGCTCCGGCATCGGGTCGGT 2169190 29 100.0 32 ............................. CCGTGGGTCACCTTCCGCGCGCCGTCGTCCAC 2169251 29 100.0 32 ............................. GTGCCATCACGTCCGAGGTGCAGCTGCGAGCA 2169312 29 96.6 32 ............................G GTCGTCCCGTCGGGGCGGAGGACGCGGACCTC 2169373 29 100.0 32 ............................. CGGGCAGCAATCGTCGAGGAGTTCCCGAGCAG 2169434 29 100.0 32 ............................. TGGCGATGACGTGCCTGCAGCCGATCATTGGG 2169495 29 100.0 32 ............................. GGCGTCCGCGTGTCGGCCCGCTACGAGTCGAA 2169556 29 100.0 32 ............................. CCGAGCTGGTCGGTCGGGTTTGAGATCGGGAC 2169617 29 100.0 32 ............................. GCCCGTGTCGTCGACGGCGACAGAGTCGGCAG 2169678 29 100.0 32 ............................. GTCGCCGCATCGAGCGCCGCTCCCGCCGCCGT 2169739 29 100.0 32 ............................. GCGGGTGGGAACGCGGCGAGGTCGGCCTGCCG 2169800 29 100.0 32 ............................. TGTCGGGGCGGGTCGCGACACACTCCCTGCTC 2169861 29 100.0 32 ............................. CCGCAGGTGCTTTAGCTGCCTTCATGGTCCCC 2169922 29 96.6 32 ............................T CCTTGCCTGGAAAGTCCGGCACGATCTGCCGG 2169983 29 100.0 32 ............................. CGGAAGACTCGCCGGAAGGCAGAGAAAGCGAA 2170044 29 100.0 32 ............................. GACGATCCGGTTCGTACCGGAGCCACCATCAA 2170105 29 100.0 32 ............................. TTCGGGATGAGGTCTGATGTCCGGGCCGACGT 2170166 29 96.6 32 ............................G GTGGGCTCGAAATTGGTGAGCCCGTTGACGAA 2170227 29 100.0 32 ............................. GCGTGGAAGACGCTGAACCTCTACCCCGGTGC 2170288 29 100.0 32 ............................. GCGCTCGAATCATTGGCGCTTGGATCGCTATG 2170349 29 100.0 32 ............................. TTGACGGCCCGGAGGAAGCTAAGTGCGCTCGC 2170410 29 100.0 32 ............................. GGCCGCACCGTCACCGAAGTCCACTCCGACGA 2170471 29 96.6 32 ............................T CCTTGCCTGGAAAGTCCGGCACGATCTGGCGG 2170532 29 100.0 32 ............................. ACGGCCTCGGCGCCCGAGTGCAACTGGATTCG 2170593 29 100.0 32 ............................. TCGGCCGCCCGCGAGCGGCCGGTCTTGCCGAC 2170654 29 100.0 32 ............................. TCGCCGAGCACCGCGCCGCTGCCGAGACCCGC 2170715 29 100.0 32 ............................. GCATCCGGGACCGCCGCCAGCAACTCCGAGAG 2170776 29 100.0 32 ............................. TCCCAATCAGACGGGACCTCGATGACCACCGA 2170837 29 100.0 32 ............................. GGACCCCCCGCGCACGCGGGGGTTGGCATGCA 2170898 29 100.0 32 ............................. GTCATCAGGGAGGGGCAAGGGGCGGCGTAGGC 2170959 29 100.0 32 ............................. AATCCGATCTCGACGTGCTTCCGGCCGTCGGT 2171020 29 96.6 32 ............................T GGATGCGGAGGGTGATCTCCTCGACGTCGAGG 2171081 29 100.0 32 ............................. GGAGGCGAAGATCCTTGCGGTCACCGTCCCCG 2171142 29 100.0 32 ............................. CGGTGGTCGTCGAGGTAGACGCGGACCTTGCC 2171203 29 96.6 32 ............................G TCGACGAAGGGGTAGTCGTTGGCGACGTAGGC 2171264 29 96.6 32 ............................G TATCAGGCTCAGGACCTTGTCGCGATCGGGCT 2171325 29 100.0 32 ............................. GTGCTGGTCTAGCGTCCATCGCATCTGGATTG 2171386 29 100.0 32 ............................. ACGCCGCCGATGATCGAACCGACCTGCACGAG 2171447 29 100.0 32 ............................. ATCGCGCCGGGGACGCTCCCGCACGATGCGTC 2171508 29 96.6 32 ............................G CTGATGGGCGTGTCGATGGGGTCCCGCGGATT 2171569 29 100.0 32 ............................. GACATACCGATCGAACCCCATACCGGCGTGAT 2171630 29 100.0 33 ............................. ATCTGGAAGAACATCTACTGGATGCAGCAACGG 2171692 29 96.6 32 ............................G TAGCGGATCATCGGCGCATCCCGGCCGACCGG 2171753 29 96.6 32 ............................G TTGGCGACACCCCGCGGCGCTGATCGGCATAT 2171814 29 96.6 32 ............................G GCCGCCGTCCCGGCACGGTTCTTCGCGCCCGC 2171875 29 96.6 33 ............................G GTCCCGGATTCTGATCGTGCTCATGCCGCCCAA 2171937 29 100.0 32 ............................. GCGGCGGTCGCGAGGATCGACGATCGGACCGC 2171998 29 96.6 32 ............................G ACGTCCTCCGTCGAGGAGAAGGTCGTCCCGTC 2172059 29 100.0 32 ............................. TGTCGGGGCGGGTCGCGACACACTCCCTGCTC 2172120 29 96.6 32 ............................T GCCGCGTCGTCGGGGTTGATGACGATCGTCCC 2172181 29 100.0 32 ............................. TTCACACCGAGGGGGCCCGATGCGCGCACACC 2172242 29 100.0 32 ............................. AGCACGAACGGCGCGATCGCGAGCATGAACTC 2172303 29 100.0 32 ............................. TTGCAGCCCGCGTGGTCCGACGTAACGGGCAA 2172364 29 96.6 32 ............................G GCCGCCGTCACCAAGGCGACCACCGACCGCGA 2172425 29 100.0 32 ............................. GCGCTACGTGCGCCGATCATCATCGCGCAGAC 2172486 29 96.6 32 ............................G AAGCGTCGCCGCATCACCTGGAAGCTCGCCGA 2172547 29 100.0 32 ............................. TCGACGGGGTCGTGGCCGGAGCATCACCAGGA 2172608 29 100.0 32 ............................. TGGTCGATGACTGGGCCAAGGCACGCAACGGC 2172669 29 100.0 32 ............................. TCGCGATGGCTACGCAGCCCGTGCTGCGTCAG 2172730 29 96.6 32 ............................T CCGTACATGCGGTCAGACACCCTCTTCTTCGG 2172791 29 100.0 32 ............................. ATGGCACTCACTCTGGCCCAGGCCGCAGTCCT 2172852 29 100.0 32 ............................. GAATCCGTCCGTCATGTGACGACGCGAGTAGA 2172913 29 96.6 32 C............................ GGTGACTACGTCCAGCGCGTGACCGCCACTGG 2172974 29 100.0 32 ............................. TGGTTCTCGATCAGTTCCTTCAGCTTCGTCGG 2173035 29 100.0 32 ............................. GGCGTCGCGCACGGCCTGGCCGGACTGCTCGC 2173096 29 100.0 33 ............................. GGGCCGAGGGAATCCGCGTCACGATGCGTTCGG 2173158 29 93.1 32 .........A............G...... TCGATCCGGGTACGCATCGCCGGACGTTCCTG C [2173180] 2173220 29 100.0 32 ............................. TTCGCGACATCGTTGCCCGCGGCCTCCGCGAA 2173281 29 93.1 32 .....................C......T GTCTCGCAACATCCGGCGGTCGTCGTCGGTGA 2173342 29 96.6 32 ..............C.............. GGCGGCTACTACTATTCGGCGCTTAGCCTCAA 2173403 28 89.7 0 ..............C..-..........G | ========== ====== ====== ====== ============================= ================================= ================== 72 29 98.7 32 GTGCTCCCCGCGCAGGCGGGGATGGTCCC # Left flank : GCCTGGAGCTCATCCGGCCCGTAGGCGATGCCGTTGACGCTGTGCGCGATCACCACGCAGGTGAACAGCACGACCCGCACGAAGTCGGCGGTCAAGGCCCGCGGAGGCCGCTGCGGCGCAGTCCTCTCCTCGACGGCGCGTTCGACGACGACGGGCCTGGAGATGGTCTGTTGCACTGGTCTGTACCTCTCGCCCTCGTAAGAATCCCCTCGTCCCGCGAGTGTAGGAACCGACCCTGTCAATCGGCTGGGAGCGAGTCGAAGGCGAGATGGTCCCGGTTGTCGAAGAAGTGCGGGCACCGCCTTGACGCCGTGTCGAGGTGACTCGACCTGGCTGCGAAGGCCTCGCGGTCCCTCCCATGTCGTTCAGTCATCCTCGGGAAGTCGCCCGCCGCGTCTTCAGGCCCCTGGTAGCCACGTAGCCTCGGAGTTGACCGGTCACTCTCGCACAAAGTCATCCTGAAACCGGAAATCACCATGTATCGTCCCAGGTCAAGAAGT # Right flank : GTCGGCACCGACGACGAAGCGCATCCGGCGGTCACATTGAGCGGCGGCCGAACAGACCTTTGATGGTTCGACTCCCCCGCCGACATCTAAGCCAGCCTGCATCGCCGCGCGGACATCGAGATCGTGAAGCTGGCTAAATCATCCGCCGTGCGATCATGGAGCGCATCGATAGACACTCCGCGTAGGTCGTCACAGTCCCATCGATTCAGAAGGATTCGTCCGGCCACGCAAGTTAGCCTCATTCCTGGGTCCAAACGACCTATAGCAGATCCCCGCTGGGATGGCCCCTAGGTGTTTCGACTGCCGACACCCAGGGCTTCGTGATCCCCTCATCTACAGGGGCGCGACCGGGCTGCATGAGCGGCCCGGTCGCACACACCAGGGCATCTCTTCGCCTATGAATTAGGTATTTCACCTGCAATTTTCATCCGAACGGACGAAATCCGGCCTACCTCCCGCCAACCGCCAAATACCTCCGTACGGTCCCTACTCATGGACAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCAGGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCAGGCGGGGGTGGTCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.60,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 2182919-2184285 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJOV01000005.1 Gordonia spumicola strain NBRC 107696 sequence05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================ ================== 2182919 28 100.0 33 ............................ CGAACGACGTCGTCGGCTGCTCGCCGGTGACGG 2182980 28 100.0 33 ............................ CTGCTCGACTACATTCAGATGCTCAGCCCACGC 2183041 28 100.0 34 ............................ GTGCCGGGGACGCGAAGCCGGGCAACTGGCAACC 2183103 28 100.0 33 ............................ CTGGGCAGCGCCCTCGACGGGGAGGCCGACCGC 2183164 28 100.0 33 ............................ GGTATCGATCAGGTGGACCTGCAGCCGAGACAG 2183225 28 100.0 33 ............................ CCTGATCGACCTCTCGGACGCGATCGACGAGGG 2183286 28 100.0 33 ............................ CCGCGAGGGTGAAGAGCTCACGATGCGGGCTGG 2183347 28 100.0 33 ............................ TCGGCGGGCGGTCTCAGCGAGGATCGCCGTCGA 2183408 28 100.0 33 ............................ CTCTGCCTCCCACTGCGCGAAGTGTCCGGCCTC 2183469 28 100.0 33 ............................ CCGGGCGGTCCTCGCCCGCATCCTCTGGCTGAC 2183530 28 100.0 33 ............................ GGTGGGCTCGAAATTGGTGAGCCCGTTGACGAA 2183591 28 100.0 33 ............................ CGTCGTCGGCGCGACCACGATGTCCCAGGTGCT 2183652 28 100.0 33 ............................ CCGCCGAGGTGATGGCGTTTATGGACAACGATG 2183713 28 100.0 33 ............................ CGGCCGCGCCGTCACCGAGGTCCACTCCGACGA 2183774 28 100.0 33 ............................ GTCCACGACGGTCCGTAGGTTGGGCTGCGACCG 2183835 28 100.0 33 ............................ CGAGATCGACCACTACGCAGCGCAGCCCGAGAA 2183896 28 100.0 33 ............................ CCCTCGGCGGACCAGCCCGACACCACAGGTCCC 2183957 28 96.4 33 ....................A....... CGTCGCCGAGCACGTCGAGCGGCCCAAGCACAT 2184018 28 100.0 12 ............................ CCTCCTGAATGC Deletion [2184058] 2184058 28 71.4 33 .AT..TG.A.G.T.T............. CATCCGCGACCGATGGGAGCACGACCCGCAGAT 2184119 28 92.9 33 ........G........A.......... GAGCGCCCCGCTTAGGTGGAGCCCGACGATTGC 2184180 27 75.0 48 ......A.......-...AC.T....GA CGTTCCCAGTCCTTTCACGGGAAAACGTCACCAACGTTCGGCGCACTG A [2184198] 2184256 28 92.9 0 .........A...............A.. | C,C [2184261,2184282] ========== ====== ====== ====== ============================ ================================================ ================== 23 28 96.9 33 GTGCTCCCCGCGCGAGCGGGGATGGTCC # Left flank : CTTCGCTCCCGACGACGAGGAACTCCCGTGGTAGTGGTGGTCCTGACCAGCTGTCCGGCGAAGTTGCGGGGAACCCTCACTCGATGGCTTCTCGAAATCAGCGCCGGGGTGTACGTAGGTCATGTCCCTGCCCGCGTACGGGACCATCTGTGGAACCAGATCGTCGAATACGTCCACGACGGAAAAGCGATCATGGTCCATAACAGCGACGGGGAACAACGCCTCGCTTTCAAAGTGCACCGTCACGAATGGGAGCCCGTCGACATGGACGGGATAACCCTGATGCGCCGACCGACGGACAACGCGGTGACACGAGGACGCGTCAGGAAAGGTTGGAGCACAGCGGCCCAACGCCGTCGTCGCCGATAGATCCGCCGTCCAGAGGACTCACGGGGACACGACCGATTCGTACCGAATACCGCTGGGCGCAACCGGACAACTGGCGACCCAAAGTCATTCTGATTTCCGGTTCTCGCATGTAACGTTCCTGGTCAGGAAGT # Right flank : CACGCCGAGTGGCTGCATCACCGCGGCGCCCGGGCATCTGTAACTACTCCGGGACTGCTGACCCACTGGATAAACGTCGTACGACTGGGCGTGTCACCTGACAGTGGAGGAGGTCTGCGGGTCACCGGCAGGACTGCAGGAGGGAGGAGACTCGCGCAGTCAGCGCGAGCCGAGGTGGCTGGGAAGCACGCAGACCGCGTCGAGGCCCAGGACTCGGTTGAGTCGTCCGAACGCCAGCCACGAACCGATGCATATGGACAGTTCGACGATTTCGCGGTCGGTATAGGACGCGCGCATCCGCTCCCAGAACTCGTCGTCGATCCCGTGGTGGTCGAGGGCGTACCGTTCGGAGTACTCGGCGGCCAACCGCACCCGGTCGTCGAAGGCGTCGGTGGTGCGCCAGTCGCGGACAGCCTGGTCGAAGGTCTCCTCCACCTTCACGCCGTCGCGTTCGGTGCGCCAGTCCTGGCAGAACAGGCAACCGTTGATCTGCGCGATCC # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGATGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //