Array 1 187363-184655 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFEHQ010000002.1 Klebsiella pneumoniae strain 1509me NODE_2_length_411264_cov_19.698178, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 187362 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 187303 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 187242 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 187181 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 187120 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 187059 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 186998 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 186937 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 186876 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 186815 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 186754 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 186693 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 186632 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 186571 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 186510 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 186449 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 186388 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 186327 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 186266 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 186205 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 186144 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 186083 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 186022 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 185961 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 185900 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 185839 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 185778 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 185717 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 185656 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 185595 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 185534 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 185473 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 185412 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 185351 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 185290 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 185229 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 185168 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 185107 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 185046 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 184985 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 184924 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 184863 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 184802 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184741 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 184683 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 45 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //