Array 1 111748-115675 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMOZ01000006.1 Klebsiella pneumoniae strain CVUAS 11252 NODE_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 111748 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 111807 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 111868 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 111929 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 111990 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 112051 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 112112 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 112173 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 112234 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 112295 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 112356 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 112417 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 112478 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 112539 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 112600 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 112661 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 112722 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 112783 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 112844 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 112905 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 112966 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 113027 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 113088 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 113149 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 113210 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 113271 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 113332 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 113393 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 113454 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 113515 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 113576 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 113637 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 113698 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 113759 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 113820 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 113881 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 113942 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 114003 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 114064 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 114125 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 114186 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 114247 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 114308 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 114369 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 114430 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 114491 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 114552 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 114613 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 114674 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 114735 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 114796 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 114857 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 114918 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 114979 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 115040 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 115101 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 115162 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 115223 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 115284 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 115345 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 115406 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 115467 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 115528 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 115589 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 115647 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //