Array 1 6672-4289 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGZT01000019.1 Fischerella thermalis WC119 NODE_24_length_88386_cov_29.208019, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 6671 37 100.0 34 ..................................... GAGGTGACTCTCTTCACAAATACATCGATGCGAT 6600 37 100.0 38 ..................................... CTTCTATCATACTCCGATAGGCACGCCATGGCAACTGT 6525 37 100.0 36 ..................................... GCGATCGCTCCCCCTCGACGACAAAATGCAAGTTCT 6452 37 100.0 32 ..................................... TACCGCGATATGATGGATATATACCCGATATG 6383 37 100.0 40 ..................................... GATGATGTAGCTCGATTTCACCGAGGGGATCCCCCATGGA 6306 37 100.0 41 ..................................... CGGCTAGCGCTCTCGCCACCTTCTCGCGGGTGTCGGGCTTT 6228 37 100.0 40 ..................................... AATCGCTGGGCGAGGAGAGCGATCGCGACCCACAGCACCA 6151 37 100.0 35 ..................................... TTTATCCGCCCCGGTTCATTGCGCATCCGGTGGAT 6079 37 100.0 37 ..................................... CTCTTTGATCGGAGAAATAGCGGTGGAGGCGATCGCT 6005 37 100.0 34 ..................................... CTGCTCGCCTACATCGAGCATATGGAATCCGAGG 5934 37 100.0 38 ..................................... GCTGCTGGCTGGCTGGTCGCTGCTGGCTGGCTGGTCGC 5859 37 100.0 38 ..................................... GTGGTCGAATACGCCAACCGCAGAGGTGCATTGATGGG 5784 37 100.0 37 ..................................... CGCGGCATCTTCGCGGACGAAGCCGCCTTCTACGACT 5710 37 100.0 36 ..................................... GGAGAATAGTACACAGGACTTCCACTATATATATAG 5637 37 100.0 35 ..................................... CCAGCGCCAGATAGCGGCAGGATCGATCTTGTGGC 5565 37 100.0 32 ..................................... AGCCCAATCCGGCACGCAATCCACCTCAGCAG 5496 37 100.0 38 ..................................... GATTCTATCTCCGTAGCTGCCGACGCAATGCTCCAGGA 5421 37 100.0 35 ..................................... CCAAGCCCATCTCTCGGCTCTCTCTCCATCGAGAG 5349 37 100.0 34 ..................................... AGGTGGCAGAAAGGGCAACCTATCCGTATATACA 5278 37 100.0 41 ..................................... GAGGCGAGAGCGCAGGCATGAGAAGTCAGGAAGAAGATGAA 5200 37 100.0 40 ..................................... TTACTAACTTATTTAATAAACAAAAAATTAGCGAGATAGC 5123 37 100.0 34 ..................................... CCAGGGGACTCATTGCTATTTGAGCCCCCTTTCC 5052 37 100.0 34 ..................................... TAAATTGTGGCACTGAACACGACCGAGATGTGAA 4981 37 100.0 36 ..................................... CGCGGAGCAGGAGTATATTCAATGGCAGCGTATTGA 4908 37 100.0 36 ..................................... AATCAATCACAAAACCGGAGTATGTAGATGCGATCA 4835 37 100.0 34 ..................................... CAACGATTTCATTGATTCTAGTAATAGGAATTGC 4764 37 100.0 35 ..................................... GGCGATCGCTGAATGTCGAGGAATTACAAGCGATC 4692 37 100.0 34 ..................................... CAAGGATTGGGATGTTCGCGTCAAATACACTGCT 4621 37 100.0 32 ..................................... TAAGCCCGAACCAGATGAATTGGGCGAGTTGC 4552 37 100.0 42 ..................................... CATTTAAAAGCTTTAAAAATGCCTTTTTAGTATGCGTCGCAG 4473 37 100.0 37 ..................................... CTGGACATCTCCGATAGTGGATTGCATATATCCGTAC 4399 37 100.0 37 ..................................... CTGTTCAATCTCCGGTGGCAAAGATAGTCTCGTGACA 4325 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 33 37 100.0 36 GTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAC # Left flank : GTCCAAAAATTAACAAGGCGACGATCGCGATTACCCCTACTTCTGTCCATCCCAGTCCAAACATAAGTGTCTCCCGTGAAAAACTCTACTTAAAATATAGTAGGGTGGGGATGTATGGATGATGTTGTGATTTTATTTGGGGTGTGTGGTTGAGTATCTTTTTTGAACCACAAAGCCACAAAGACACAAAGAAAAATCGATTTTGAAGTCCTAGTGTTATGGCGATCGCCCTAGGCTACTTAGGCTTGATTGGTGCAAACCTGTAGGTGTTTTTTGGAGCAGGTGAATTTTAATCGCTGGAAGCCCTACCAGTTCTGCTTTTGAATGCTTCTAAGTCCAAAAGGGGTTTGCACCAATTGTGAAATGCTTGCCAGACAAGGTTTTGAGCCTATTTTTTCTTCTCCGCCCTTGACATTCCGATGGCTGAAACGCTATATTTACTCTAGGTCCGCACCACTGAACCTTGAAAACCAAATACAGCAAGGCTTCTGAATTGAGCA # Right flank : ATTTCTTTGGAAAAAGATGAGCCTATTTGTNNNNNNNNNNCAAAAGTTGCAACTTAAATTAATCCCTATTAGGGATTGAAACTTGAATTTCTGGTTGTGCATCATCGTGGCACCTTGTTGCAACTTAAATTAATCCCTATTAGGGATTGAAACTGAATATCTATTCTCTGGGAAGCTGGATTTGGATGGAGTTGCAACTTAAATTAATCCCTATTAGGGATTGAAACAATAATAATGAACTTAGGAGAGATAAAACACTTGTTGCAACTTAAATTAATCCCTATTAGGGATTGAAACGTTTTCTCCCAAGGACGAACTTTGAATCGAGCGAGTTGCAACTTAAATTAATCCCTATTAGGGATTGAAACGGTAAACGCGATCGCGACATCGAAATAACCATAATTGTTGCAACTTAAATTAATCCCTATTAGGGATTGAAACGGGATTTACTATAGATTGATTGATTTGCAGGAGATCGTTGCAACTTAAATTAATCCCTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 300475-306067 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGZT01000064.1 Fischerella thermalis WC119 NODE_187_length_479639_cov_29.015024, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 300475 37 100.0 33 ..................................... ATGACCAGCAGAGCTGCAAATATGCTAAGTATT 300545 37 100.0 39 ..................................... CGACGTCAAGACGCTCGGCAACTGGACGGGGAATGTCAC 300621 37 100.0 36 ..................................... GGAAATTTCTTCTGGCACGGCAGCGCCACCCCAAAC 300694 37 100.0 34 ..................................... CAAAATCCTTGCCGCGTGCCCGGTGCGACGAATC 300765 37 100.0 34 ..................................... GGTCTCCGCCTTTTTGCTTGCGATCGCACCCATT 300836 37 100.0 39 ..................................... TCTCTCAGATGTACCTACGACTCGCTGCCTGGCTGGTCG 300912 37 100.0 44 ..................................... AGCTGGGGATCAATCTGACGAGGAACGAAATTGTTGCGATAGCC 300993 37 100.0 35 ..................................... GGCTTGTACCTAGGATTCAGCACTTCTTGAGCGAA 301065 37 100.0 32 ..................................... TTTTTCTTCGGCAGGATAATCTTTAGCTCGTG 301134 37 100.0 41 ..................................... TCTTTGTGGCGTACTCTGCGAGAAGCAGCCAGGATCGAGGA 301212 37 100.0 39 ..................................... AAGCGATCGCGGGAACTCTCCTCGAAGATTCTCTCTGGC 301288 37 100.0 36 ..................................... CCTTGCAGTACGTGATAATCAATAAAGCTGCAAATA 301361 37 100.0 39 ..................................... GAATTTCTTGGTAAATGCCCGAACCAGCCCGACCAGCAC 301437 37 100.0 34 ..................................... CACACGTCATGGGCTGGTGCTTTGGCGACCGCGA 301508 37 100.0 37 ..................................... CGTATCGTTGTATAGGAGAGCGTATAAACCGGGGAGA 301582 37 100.0 37 ..................................... AGAATAGCAATGCTAGCCATTTGTCACTTGCCAGCGC 301656 37 100.0 36 ..................................... ATCGAGTTTGCAAGTGCTGTGTTGATAGAGAGCGCT 301729 37 100.0 34 ..................................... AAATATGCAGACTTGCAGATACATTGAATGTCTG 301800 37 100.0 37 ..................................... TTTTAGGCTATTTTTGATGGCATCGATTTCTGGTTGA 301874 37 100.0 32 ..................................... CCGAAGGAATTCAGGGACTGTATCGGATGCGA 301943 37 100.0 44 ..................................... CCTCCAGCCAACGATCTTCCCATGGGTGCCGGAAGCGAACGCGA 302024 37 100.0 36 ..................................... AGAAATTCGTCGATTATTCGGAGGATAAGGAGTACG 302097 37 100.0 36 ..................................... ACGGATCGCGGACGACGCGGTGCCCGGACAGCCCAT 302170 37 100.0 35 ..................................... TATCCGCCTATCGGAGAAGGCTTCGTAAAGCTGTC 302242 37 100.0 34 ..................................... CGTGGATTGCTTTGTACTGATTTTGTAGAGGTGT 302313 37 100.0 34 ..................................... GCCTCCTCAGGAGAAAAGTAGTCGTACCATTCTG 302384 37 100.0 42 ..................................... AAGGGTACTGCATTTGGACAACATCTAGCTGGTGTATTCAAG 302463 37 100.0 35 ..................................... ATCAGATGGAGCTTTCGAGGTGGCGATCGCGAGAC 302535 37 100.0 34 ..................................... CCTCTGGCTCCACAGAATACCGCCCCAGATCAGA 302606 37 100.0 36 ..................................... GAACTCGATAGTGTACGCGACCGCGCCGCCCACCCG 302679 37 100.0 35 ..................................... ATAGCTCGCAGGGAACCTATCAAATTGGGGGGGTA 302751 37 100.0 35 ..................................... CTAATGCCCGCCTTATATGCATCATTGAGCATTGG 302823 37 100.0 42 ..................................... TACTAGGTAAAATTTCCTGTAGCTGTTGTGATGATGCCCGAG 302902 37 100.0 35 ..................................... AGACTGGACTTTTATCGGTCGTTAAGTCCGGAACA 302974 37 100.0 35 ..................................... GGGGTGCCGAAAACCTGGGGCAGAAATGGGCTAGG 303046 37 100.0 36 ..................................... ATCAAGAGGTAGCGAATGTTCGCAGCACGGCAATAT 303119 37 100.0 35 ..................................... ATCCCTCAGATGCGAGTCCTTAACCGTAGGATGGT 303191 37 100.0 33 ..................................... CGGATATCGCCATGTATCGGAATTCCTGGAAAG 303261 37 100.0 34 ..................................... CCCGCGTCCACACCGGGAAGAATCCGCCGCCGAT 303332 37 100.0 38 ..................................... TCCCCAGTATATCACCAGCGATCGCCATAAAACGTATA 303407 37 97.3 35 ...A................................. CAGATTCCTCCGGGCAGAGAAAACTGCACAGAACT 303479 37 100.0 32 ..................................... TTGCCCAGCTTTACAGGAATGTACACGCAATG 303548 37 100.0 35 ..................................... TTTTCTATTAGGGAGCGATCGCTATTAGAGTGGCA 303620 37 100.0 40 ..................................... TTCGTGAAGCGGATCCACTCGACCTTCCGAATCCTGTTCG 303697 37 100.0 40 ..................................... CTCGTCCATGAGTACGAGCAGAGGGGAATCCGCCCCCTTC 303774 37 100.0 34 ..................................... TCGAGTAGGAGAGTTTCTCGCATAAGTGAATCTC 303845 37 100.0 35 ..................................... GGCTGCCCGGTGTAGGTATCCCGCTGGAACCACGA 303917 37 100.0 33 ..................................... GCGTTCCGCGATCGCATCATTGATTGATTTAAA 303987 37 100.0 36 ..................................... GTAACAAATTCTAACAATCGATGGTGGCGATCGCGG 304060 37 100.0 34 ..................................... GAGTTGCTTATCCTATAAGCGATTTCCTCGTCAG 304131 37 100.0 35 ..................................... GGGCACTTCGTGGATAGGAGTGATGTAGTATGGAA 304203 37 100.0 34 ..................................... ATAGCTTGCCCTTCTATCTTCATAGTGCGGTAAC 304274 37 100.0 33 ..................................... CATTGCCAGCTTGTACCCATGCTACGAATTCTT 304344 37 100.0 40 ..................................... AGGCGAGAAATTTCCCCCAGCGATGAACGTATTCGCAAAA 304421 37 100.0 38 ..................................... GCCGCGATCGCACGCGCGATCGCGCTGCACACCGCCAA 304496 37 100.0 33 ..................................... CCATTGGCACGCGATTTATCTAATAGGCGATCG 304566 37 100.0 35 ..................................... AGTCCATCCTTGGCGGTGCATAGGCATGGGTGCGG 304638 37 100.0 36 ..................................... ATTGGGCTAGATGGCTCTGGCATCTTGGTCAAGCAA 304711 37 100.0 38 ..................................... GGCTGGGACTTGGGCGATACTCGTGCCCACTCCTCCAT 304786 37 100.0 39 ..................................... AGTCTGGTCAGTCGGCGCTTTCTCCCTGCTAGCGGCAGG 304862 37 100.0 34 ..................................... GGCAACCCAATCTGGCTGCTTGCTGACTCGCCGG 304933 37 100.0 34 ..................................... AGAATGATGGCTGTGACTCCAGTGACAAACCCAG 305004 37 100.0 35 ..................................... CTGAATGAGATGCTCTATATTAATCTCAGCCATTT 305076 37 100.0 39 ..................................... CCGCTTTTAGTTTCCCTGCTTTCTCCCATCGTCGCAAGG 305152 37 100.0 41 ..................................... ACCCGCGATCGCAGCCACCGTCGGGCACGCGCCAGGCAGAT 305230 37 100.0 34 ..................................... GACCTTGGCATCGATCGATATGGGCTTGGAGAGA 305301 37 100.0 38 ..................................... GTCTAAGACCCATCAGACCCAGAGTCGACTTAGCGCGT 305376 37 100.0 34 ..................................... CACGATGACTTCCTAGACACCATGGCTATGTTGG 305447 37 100.0 36 ..................................... TCGCGGATTTATCTCGAAATCCGCCGAGTCGAATAG 305520 37 100.0 40 ..................................... CAGCAGAAGCACCCTGCTGGATAACCCAGGTATCGCAGCA 305597 37 100.0 36 ..................................... GCCTCGACCCGCTTCCCCCGACAAGGCGATCGCTTG 305670 37 100.0 36 ..................................... ATCGTATAGACCAAGCGGGGATCACAGCTATCGCTA 305743 37 100.0 35 ..................................... GGTCTGTAGCAAAAGAACTAGTGGATGGGTACAAA 305815 37 100.0 33 ..................................... ATGTCGACAATCTTGGTAACAAAATCCCCTATT 305885 37 100.0 35 ..................................... AGAGAATATCCCGGATCTTTTTTGCTCCTCGCTGA 305957 37 100.0 37 ..................................... CCGCAGATACAAGCCGCTACTCATTCTCTCTGACTTA 306031 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================ ================== 77 37 100.0 36 GTTGCAACTTCAATTAATCCCTATTAGGGATTGAAAC # Left flank : CCTGACGGTACAGCAGCAAATATTCAACGCACAGACTCAATCAAAGATGGTGTGATTACAAACTCTTGGACGATCGCAACTGGTGATCCTATGGGTAAGCATAAAATAGAAGTTTATATTGGCGATCGCCGTATTGCTACTTTTGAGTTCGAGGTGGTTCCAGCTAAACGGCAAAAGCCAGCTCCAAAAGCGTAGTTACAAGTTTTGCTATAGTCGATAAATAAAGATTAATCTCTCTTCAGCTTAGAGTTGGTGCAAACCTGTAGGTGTTTAAAAAAAGCAGTCAAATTTAATGGCTACAAGCCCTACCTGTTATGGCTTTGAACCCTTTTACACTCAGATAGAGGTTTGCACCAATTCTGAAAGTCTTACCAGCAAAGCTTTTGACCTATTTTTTCATAATTCATCTTGACACCTCGATGGCTGAAAAGCTATATTTTGTCCAGGTCTGCACCACTGAACCTTGAAAACCATATACAGCAAAGCTCCTGAATCTAGCT # Right flank : CCCGGTAGCATGGATCTCACACACTTGAGAGCGCGATCGTTGCAACTTCAATTAATCCCTATTAGGGATTGAAANNNNNNNNNNACCCCGGCTACGCCACCCCTCTCCTTGGTAAGGAGAGGGGGAAGGGGGTGAGGTCGGGATTTGGGGTGATTCGATCATTTGTGTGTACACCGTAGCCTTGGTAAGGAGAGGGGAATTCGGGACCCCCACTCCCCCAAGGGAGTGGGGATTAGGGGAAGGGGGTGAGGTTTCGCGGATACAATAAATAAACAAACGGATTTCATTTCATAGCGAAATATTTACTATTCAGACTTTGCGCCCCTTTGCGCTCACCTTTGCGTTTCAAATCACCACTTTTTTTATGCAATCTCCACACCACACACAAGTGCCAATGATAAACTTACCTCCAATCTTCCACTAACTCTGATTGGGCTTCGGGGTGAATATATGCGGGTTTTTCTTTGCGTGGTAATTGACCAGATATGACTAAATGGGCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTCAATTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 9-550 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGZT01000068.1 Fischerella thermalis WC119 NODE_258_length_38922_cov_28.535225, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 9 37 100.0 35 ..................................... GAGCCTCTACCCCTCCGCGAGCGTAGCGAGCCTGT 81 37 100.0 34 ..................................... CTACTGGGCGCAATTGGGATATTAATTTATCCGC 152 37 100.0 32 ..................................... TGCTGCTCTTCAGCAGATTGCGAGGCAATTGG 221 37 100.0 36 ..................................... GATTCGCAAATCTTTTCTTCCTTCTGTAGATATCGG 294 37 100.0 39 ..................................... TTTGTCAGTAGTTGGGTATCTACTCCCTAACATCTTTTC 370 37 100.0 34 ..................................... GATGCGGATGGAGCAGGAACATCTTCAGACCCGT 441 37 100.0 36 ..................................... CTATTTCTTCTTTCTCTGCGCTACTGCGTCCATCAA 514 37 89.2 0 .................................GGTG | ========== ====== ====== ====== ===================================== ======================================= ================== 8 37 98.7 35 GTTGCAACTTCAATTAATCCCTATTAGGGATTGAAAC # Left flank : GCGCGATCG # Right flank : GTTGCATAAATGCGGGATGAATTATGCAAATACTGGTANNNNNNNNNNCTTTGGGTTGCTCAAACTGGTAGCACTGTTGTGTTAAAAGGTAAGGTTCCTAGTCAAGATATTCTCAACAAAATGGTTTCTGTGGCGCGAAGCGTCAATGGTGCGGCGGCTGTTGATACCAGTCAAGTTACTATTGGCTAGTCTATAGTCTGGGGCTTTAGCGCTTTTAAGATTTTATGCTTTGGCGCTGAAGCGCTAACTACAAACTGAACACGTTAAAAGTTTTGAGCTGAACTAGTATCTGGTAAAGAGTTATCTTTGGATTGGCGATCGCTTAGTGAATTAATCCAATCTAAAATTGCTTGGTTGATTATCTCTGGATTTTCATCGTGGGGACAATGACCGACGTCTTCTATAGTCAGCAATTGTAAGTTCTCGTTATATTGAGCAAATTCATGGGCAAGTGCTGGCGGGACAAATTTATCTTTTTTTCCCCAGATTAATAACATGGG # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTCAATTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 2 2657-2404 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGZT01000068.1 Fischerella thermalis WC119 NODE_258_length_38922_cov_28.535225, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 2656 37 100.0 33 ..................................... TTTGGAGCCAACGATGCATACCTTGGGCAATCT 2586 37 100.0 36 ..................................... CTTACTAACTGCGCCTTTGGCTACCAACTTTGTGAT 2513 37 100.0 36 ..................................... CAATCCGATGCTGGCAATGCCCCACCCTTCATCCAA 2440 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 4 37 100.0 35 GTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAC # Left flank : AGAGAGGAAGGGCTGGACGTGAGTGGTATGAGAAAAACTTCCAAAATCCTTTCTGGCGTGAAGTGTATAAGAGAGAAGCCTATGTGATCCAGAACGAGATCAATAGGCGTATCCGGAAGGGTGAGTTATCTATAGAGGATGCCAAAAACCTATGGAAGGAGGCTCAGTCAAAGATTGACAAAGAGTACCAACGTAGGTTATCATTAAAGAACAGTAAATGAGGTATCTAACATGACTACTCAAACTTTTGAGTCCCCAACCTTGATGCACTTAGTGACTGTAGAAGGTCTACACATATCCATAGATATGGAAGACATCGACTACATGGAGGTGCTAGACGAAGGTCTAACCGATGACGACTATCTGGATGCTCAAGAATATGCCATCGTTACGAAGGATGGCGCAGAGTACCATATAGATCTATTTGATAACTTGTATTATCAAAATATGTTATGGGACATGTTTAATACGATGTAATAGGTCAGCTGATTATGCACACT # Right flank : AAAAATCCATTAGATGTAACCAAACCACTCACAATGAGTAACTAAAAAATTACGTCGAGAACCAAGAACAACCAAAACAATGATTCGCTACGCTCAGTTTTATATTGGTCGCAATTCATCTGCCGTTAACTCTTTCGCCTTATATCCCGCCACTGATTCGGAGTACCGAATTCAGTGGGGGACGAGGGCGCGAAAGAGTTAAACATGAAATGCTCTACAACGCGATCGCCTCTAATACCAATTTAATGTGAAGCCGCACCAAATGACTAACCCTCCACTCTTGGCGTTCTTGGCTTCTTGGCGGTTTGTTTTTTAATATTCTGTACATCTTCATAAATAATTGCATTTCGTAAGTTCATAGCGAAATGTTTGCACAAAGACTCCGCGTCCCTCTGCGTTTCAAATCGCTACTTTTTCATGCAGTTTTCAGGCCTACTTCTATTTCTTCCGCCCGCCAAGGCGAATAGGCAACTACTTCCTAGATATATGCTTCTTCTAGA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 3 6401-3552 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGZT01000068.1 Fischerella thermalis WC119 NODE_258_length_38922_cov_28.535225, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 6400 37 100.0 35 ..................................... CGGTGCGCCGATCGCACCAAGACCGTGTGCCGCAG 6328 37 100.0 33 ..................................... CTCGATATTCCTGGTCTAATGGTCAGTCTGTGT 6258 37 100.0 35 ..................................... GAAACTCAGCCAGGCTCCTAGCCGCTCTGATACAC 6186 37 100.0 35 ..................................... TTCACCCTTCGCGATCGCAACGCCATCGACATCGA 6114 37 100.0 38 ..................................... AAGTACTTGTCGATGTCGATGATTTCGATGTCTGCGAG 6039 37 100.0 34 ..................................... CCCTATCGAGCAGAATATCTACAATCGGAGGGCT 5968 37 100.0 33 ..................................... CATGGGCGCGATCGCTACATAATATCGCGATAT 5898 37 100.0 34 ..................................... ATTTCGATAATCAAGTGGATAAGGGATGTGTGGG 5827 37 100.0 34 ..................................... TTCGTCGCCGATGTAGCGCGGGCGATCGCACTAC 5756 37 100.0 34 ..................................... CCGGCTCATTCCGCATCCGGTGGATGAGCAATCG 5685 37 100.0 34 ..................................... CGCTACGATCTCCACGAACTGATGCCATCCGGGC 5614 37 100.0 33 ..................................... CAGAAGCACGAGTTCGTAGCCGCCGCCCATCGA 5544 37 100.0 37 ..................................... AGCCGTCGGTAAGATACCTAGCACCGTCACAGGAAAC 5470 37 100.0 33 ..................................... TTTACTGCGGTGGGTAACTTAGCTGATTCCATC 5400 37 100.0 34 ..................................... GAGGTTCAGGACGGCATAGTAGTCATTACACGCG 5329 37 100.0 36 ..................................... TGCCCACATGGGCGGCATCCCGGCTTCCCGCAGCCA 5256 37 100.0 33 ..................................... GTAAGGAGGGTGACCTAGATATTGAAATGCTGC 5186 37 100.0 32 ..................................... ATGATCGCATCTATTTCACTTTTCCCATTTGC 5117 37 100.0 36 ..................................... GCCGAGAATATTTCTCAGCAACTAGCTCCGCCAAAG 5044 37 100.0 34 ..................................... TTCTTCTCTGAAGAAGACAATTTGGTGTTCTGTC 4973 37 100.0 34 ..................................... TGACATACTCCCCGGCGTGAACGCACGGGGATTG 4902 37 100.0 37 ..................................... AGTTGGAATGAGTATAAAAAATCATTTAAAAAAACAG 4828 37 100.0 36 ..................................... AAAGCTTTTGGCGACTACTAATCGGCTTTGTCAAAA 4755 37 100.0 37 ..................................... TTAAATGAATCTCGTAAATTCCTGGCGCTGGCAGCGT 4681 37 100.0 34 ..................................... GAGATCGGGCAGGTAAGCGGCTACATTGGCTCAT 4610 37 100.0 35 ..................................... AGTAGAGAAACCTGCTCAAGATGATGAGGGGTTGG 4538 37 100.0 33 ..................................... AACTCTGGTATGAACAAATGCTGTAGTAGCTAT 4468 37 100.0 41 ..................................... TAATTCTTGTTGTTCAAGAGTTATTCCGAAGCCGCTTGCAA 4390 37 100.0 37 ..................................... TGGCAACAGCGAAATCATCGAACTGACCAATCTTGTT 4316 37 100.0 35 ..................................... ATTGATTAATACAGTGTAGCCATAAATATTCGCTA 4244 37 100.0 38 ..................................... CGATCCATGGATGGGAAATACCCCTTCGTCTCGATGCA 4169 37 100.0 36 ..................................... ATCCCAATCAGTGCAACACTAGCGACTTTGGAGATT 4096 37 100.0 35 ..................................... ACCGAAACCACGATTACAACCAGCACGCCTCTGTT 4024 37 100.0 38 ..................................... TGCCCATTTCGCTCATGGTACTGGCAACAACCGTCCTT 3949 37 100.0 33 ..................................... GAACAATCACGTAATTCACGTATCCGCGAATTG 3879 37 100.0 35 ..................................... TTTGTGTAGGTACACCGGATAGTACCCCAGATCCT 3807 37 100.0 33 ..................................... GATGAAATCTATACACGCAATTATCATTTTACC 3737 37 100.0 41 ..................................... TGTCTAAGGCGTTTGGCGGCTTTTTTACTTATCTGGCTAAT 3659 37 100.0 34 ..................................... GACCTCCACGGTGTTGGCTAGGAAGTACATGGTA 3588 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 40 37 100.0 35 GTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAC # Left flank : TTTTCTTTGTGCTTGCTGTCAGGGTAAAATTGAGCGCATTGGTGGCGAAATGCCAATGGATACTACGGTGTTTTTTGCTTGATGATGGTGCAAACCAGTAGGTGTAGAAAAAAAGCAATCAATTTTTGGGGCTGAAATGCTGATTCTGTCTAAGTTAGAGACTGATTTGATGGCAAATGAGGTCTGCACCTTTTCTGTAAATCTTACCCTGACTAGATTTGAGCCATTTTATACTCGTTTGCTCTTGACAGTGCGATCGCTCAAACGCTATATTTAATCTAGGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTGAACCTTGAAAACCAAATACAGCAAGGCTTCTGAATTGAGCC # Right flank : TGTACGGCATATGGGAGGGGAGGTACCTAAAGAACTATTATACACTTTTAAAGACGGCACTAAGTCTTACCTAGGCGCGGAGATCCACCACTATAAACAATGGGCTAGGATAGATTTTGAGGACATCACCAGAAGGTTTAAGGAGGGTAAAATAACTTGGGAGCAAGCCAAAGAAGAAGCTAGGAAAGGTTTATTTAAAGAAAAGGTGGTATATAAAAAGACCGGAAAGATTAAAGAGGATTATCAGATAATCCCTCAGAGTATTAAAAATCGTAGTTATGTAATATTGGCTGGTGGGGTACATAGAGGAGGTGCTCCTTTATATAAGTACAGCCATCCTCTAATACCTGATGTGGAAAGCCCCACACCAAAGTTCAAATCTTATGGTATTCCTAAGAGAGGAAGGGCTGGACGTGAGTGGTATGAGAAAAACTTCCAAAATCCTTTCTGGCGTGAAGTGTATAAGAGAGAAGCCTATGTGATCCAGAACGAGATCAATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : NA // Array 1 129608-129427 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGZT01000039.1 Fischerella thermalis WC119 NODE_54_length_153059_cov_31.812550, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 129607 36 100.0 37 .................................... AAACCATCAACGACGGCAACACACCAAACGAAACCAC 129534 36 100.0 36 .................................... TCTGCGTGGGCCATGCTTTTGATTGGCTCCGCCTGT 129462 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 3 36 100.0 37 CTCCCCACTCGCTGGGGAAACTAATTGAATGGAAAC # Left flank : TGTAATATCTAATTCTCGGCTATATCTAAACAATAGTTCTGGCGAACAGTTACTAAAGAACAGCTAGGATTAGCATCACCCTGCTCTGGAATTCTACTCATTCCCTGTAAGCTTTGCGGCTTTGCAATAAAGAAGCCTACAAAATAATTTTGTACTGTCATTAGTTAATTTAAAATGCGGATGAAAGGACTTGAACCTTCACGCCTCGCGGCACTAGAACCTAAATCTAGCGCGTCTGCCAATTCCGCCACATCCGCATCAGTTCCTTATCATAGCATAAAAGTTGTCTAGAGCAATAATTTTTACGAATTAAGAGCAACTACCGAAGTTCAGCCCAAATTCTGCAAATGCCTATTTTTGTGTTGTGAACTTCGGTTGTTTAGTACATAAGGGTTTTAGGCTTTTTGTTTGGAGGAATTGAGATGTTTTTGTCTGTAAATTATCTGAACTTCGGAAATCGGCTCTGGAAATCTTACTGGGTAACGGTTTAAAATAGGACT # Right flank : TGAATGGAAACAATGGGAACCTAAATTACACCGACACGAGGTAATCGATGCTTGAATCCGCAGAGAATTTCCCAAGAAATTGTGTTTAGTTGATTTGCCCAATCATCAGCGGAGATTTGTTGTTTGCCATCTTGACCTAGTAGGGTGACTACCTCACCTTCTTGTATATCTGGTAAGGCACTGATATCTACCATCAGTTGATCCATTGTAATTGCGCCGATCTGTTGTACTCTTTGACCACGAATTAATACCTGCATTTTGTTGGAAAGATTGCGTGGAACACCATCGGCATAACCAATGCCAACAACAGCAATTCGCATTTCTTGCTTGGCAATAAATTGATGACTGTAACTCACACCAGTCCCAGCAGCAATGGTTTTGACTTGGGTGACTCTGGCCCTGACTTGCAAAACAGGTTTCAGGTTAATTTGCGATCGCAAATGTGTGGCTGGGTAAAGTCCGTAAATGAGTAAACCTGCACGCACCATATCATAGTGTAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCCCACTCGCTGGGGAAACTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 19472-24218 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGZT01000046.1 Fischerella thermalis WC119 NODE_75_length_53848_cov_29.148083, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 19472 37 100.0 34 ..................................... TGCGATCGCACCCATCGAAGATTCGAGCGATCGC 19543 37 100.0 34 ..................................... TGATGATAGAATCAGACCAGTCGTTACTGATGCC 19614 37 100.0 44 ..................................... TTCTCTGNNNNNNNNNNCATCCTACGCATCGCATCGATGATCTT 19695 37 100.0 37 ..................................... CTTCCAGATTTAGCTTCATGCCATTGGCTCCATCGGG 19769 37 100.0 35 ..................................... GTCGCCGACGTATTGCCAGAAACAAGCCCAATCCA 19841 37 100.0 35 ..................................... TGTGCGGGAGCGATCGCTATCCTTCGACCGGAGAA 19913 37 100.0 34 ..................................... CGGGTCGACGATCGTTGGTGGGGAGTACATGCTC 19984 37 100.0 34 ..................................... ACGGGAACCGTGACTGACATCTTCCCATTCCCCG 20055 37 100.0 38 ..................................... TTCTCTGCCTGGAGGAATCTGCACAGATTTTCCATATA 20130 37 100.0 40 ..................................... TGGCTGCCTCGATAAAAGCTCGCTCCCCTCCCTCAATCCG 20207 37 100.0 33 ..................................... CATCCTCCTTGTAGATCACCACGGTCGCTAATC 20277 37 100.0 35 ..................................... CGATATCGTTGGCGATCGCGCTTCCCTCTCCCATC 20349 37 100.0 37 ..................................... GCGACCACGCGGATCCAAACCTGGTCTCCCTGACCGA 20423 37 100.0 34 ..................................... GAGGCGACGACTTTATTATTTACGATCCGGAGGA 20494 37 100.0 33 ..................................... CCAAGCGTCTCAAAAAATGGCGAAGTCTGGGAC 20564 37 100.0 38 ..................................... TAAAAGAAAAGAGCGATCGCGCTGCGGCGATCGCTCTG 20639 37 100.0 34 ..................................... AAGGAACCTGCCAGGAGATGGGAATGCAACTCAT 20710 37 100.0 33 ..................................... CGCATACTTCCTTAAAGTGTTGGGGTGCAAACC 20780 37 100.0 35 ..................................... AGCGTCGCGATCGTAGGCAGCGAATATCTCCAGCT 20852 37 100.0 38 ..................................... TCCGGGGTGGCGCTAGCTGGTGGAATCCAGCCACCGGA 20927 37 100.0 35 ..................................... CTGGATTCCGGCAGGTATCGCGATATTATGTAGCG 20999 37 100.0 33 ..................................... CCACCCGATATACGGCGGAGAGAGCCGGATAGT 21069 37 100.0 38 ..................................... GCTGGAAAGCTCGCTCTCCGCCCAGCTAGGGATCGCAA 21144 37 100.0 35 ..................................... ATCTGTGGGCGGAATCGGCTTGCCATCTTTATCAA 21216 37 100.0 39 ..................................... TAGATGTGGTCCACTGGACAAAGCATCGTGGGTGACGCT 21292 37 100.0 37 ..................................... GCTATTTGCCCAAATTCTTGCTTTGTAATTTATGAAT 21366 37 100.0 33 ..................................... CCCAGAGAGTGCGATGCCTGGATCCCCTCCCCG 21436 37 100.0 40 ..................................... TAGCAGCGATCGCTGGCAAATTGACTTTCACCGGACTAAA 21513 37 100.0 35 ..................................... CTCTCGAAGTACCACTCGATGGCATCTACCGTTGT 21585 37 100.0 35 ..................................... ATCCCTATGGCATATGCAAAATGAATATCGATATC 21657 37 100.0 33 ..................................... GTCGGCTCAGGGTCGCCGGCTAGCCAAATCAGC 21727 37 100.0 37 ..................................... GTCCAGTCCCACCGCTTTCTCGATGGAATCGAGGATT 21801 37 100.0 34 ..................................... CCGATGATGATTAGGAGACCACAATGTATTTCAG 21872 37 100.0 34 ..................................... GAAACCTGCCCAGCTCCTCACGATAGGCGCAAGA 21943 37 100.0 34 ..................................... ATCCGTGGGGAGTACTTCCAGCCTCCTCGCGTGG 22014 37 100.0 34 ..................................... GACCTGACTCTGCCGCCAGGCACTGCGGTGGGCG 22085 37 100.0 36 ..................................... AACCGCGGCGACGAAGACCCCGCTGCTCGACTCCAA 22158 37 100.0 34 ..................................... GCCCCATCTCGTGGTCGCTCCTTGGCGGGATCTG 22229 37 100.0 38 ..................................... TTTTGCATCTGTGAAGACCTCGATCATTATCTAGGAGA 22304 37 100.0 33 ..................................... AGCCATTTTCCTGACTTTGAGGGTGTGGCGATG 22374 37 100.0 37 ..................................... GTTACTGATGCCGAAACGAGAATGAATGGGGGAGCGA 22448 37 100.0 34 ..................................... CGAGGGAGAAAGGTATTTCATCGAGTAAGCCACA 22519 37 100.0 35 ..................................... CCGAGCAGAGCGATCGCAATCTCTTTCCGAGAGCG 22591 37 100.0 43 ..................................... TTTCCGACCAGCAGATCGATTTGGAGCCACAGAGCTGCCATCG 22671 37 100.0 35 ..................................... TACGCGGAGCGTGCCGGAGGCATACTCTGCGAGAG 22743 37 100.0 33 ..................................... GGGATGCCACCCCTCTCCCCGGCACGTGGTATT 22813 37 100.0 33 ..................................... ACGACCGGCGACTGCCGGACGAGCTGCCCGGAA 22883 37 100.0 33 ..................................... CCGGCATCCCGACCTATCAGATCAGCAACTACA 22953 37 100.0 33 ..................................... CTCATACAGGTTTACGGCACGCCAGTACCAGAA 23023 37 100.0 33 ..................................... GCTAGGGAATCGACGATCCCATGTAAGAAGACC 23093 37 100.0 35 ..................................... CAGGAGGTGCCCAGCTGCTCGGCGGATGCGCTTTG 23165 37 100.0 37 ..................................... TATTGTACCATCGCTGGCTGGCTGCTACTCGGATGAA 23239 37 100.0 36 ..................................... GACGCGTAGCGGCTTCTCGAAGAGTTCGCCCCAAAA 23312 37 100.0 34 ..................................... TCCTGGATCGGGAGCCAGCTGCGCTCGATAGAAG 23383 37 100.0 35 ..................................... GGTGCTACCCATTATTTCCTGGTACAGCTCTTCAG 23455 37 100.0 41 ..................................... TGTGCCTCACCTCCGACAGACTGGGAAATGTCTCCCGCCTA 23533 37 100.0 36 ..................................... GATCGCACCCAAAAGAAAAGCCGGCTACGAGAGCCG 23606 37 100.0 33 ..................................... TCTATTTGCTCTAGGTGGCGCTGGGTTTCTGGA 23676 37 100.0 33 ..................................... CGAGAATTCGGCTGAATTCTCGCTGATTGGTGA 23746 37 100.0 34 ..................................... TCTGTCCTGACTCGGCAATCACAATCGTAAATGG 23817 37 100.0 36 ..................................... GGTGCATGGGAAAGAGCACAAGATGACATCGTATTT 23890 37 100.0 38 ..................................... TGGTGACATCCCATTTAATCCGCCAAGTTTATCCTGAG 23965 37 100.0 33 ..................................... ATGGGGGCGATCGCATGGCTTTTATCAGTCGCC 24035 37 100.0 33 ..................................... CTAGAAATTCAGCAGCATGTTGAGGTCGCCAAA 24105 37 100.0 40 ..................................... GCTTGGCGCAAGTGCTTTGACAGGTGCTTTAATCGGTGGA 24182 37 97.3 0 ....................................G | ========== ====== ====== ====== ===================================== ============================================ ================== 66 37 100.0 35 GTTGAAATCAACTAAAATCCCTATCAGGGATTGAAAC # Left flank : GGTGGTGTGGAAGCAACGCCAAAAGTCTGGGATCTAGCCGCTGCTTGGGTAATAGTTAAGGCTGCGGGAGGAAGTTGGATCTCACTCAACTCAGAACCTTTTGCTTTATCTGCTGGTGTTGATTATAGCGATCGCTCTTTCCCCACTTTGGTTGTCAGTCGTCCAGAATTGGTGTCTACATTTAAGCCATATTTGGAAAATTTAAAGATTTGAACTTTGGCGTTCTCCAAGTTGCTTGGTTGACTTTATGGTGCAGATGGGTAGGTGTAGAAATCAGTTAGCCCATAAAAAGTACCTTAATCCCTGTAACAGCAATAGTTTCATCGATTAAGTAGCGAAAATAGGTCTGCACCAATAGCAAAACGCTTACTATACAAAGCTTTCAGGCTGAAATTTTGAGAGGCTCTCTTGTCACCTAATGGCTGAAATGATATTATGATGACAGGTTTGCACCACTGTACCTTGAAAACTAAATACTGTAAGGGTTTAAGTTTGTAGCG # Right flank : GTGGTGAGATTTACGTATAGCACTTTAAAATTAGGAGACTAAAAAAACCAAACTTATACGCAAAACCTTACTTAAATCTATAATTTAAAAATAAAATCAGCGATCGCCACCTCATCTTTACCTGTTATAGCTTCTTGGGGAGGACTCAGTAAAACAGATCGCTGCATTAATTTCTGACTTTCAAGACGACGTTCAACCCGGCTAGGAATTCCGTAACCGTAAACAATATGTCCTTGTCCAGCCAATACTGCGACTTGATAATCTGGATTAGCTTTGACAAACTTTGCAATTCCTTCTGCCATTGTTTCATCCCATAACACTTGCGCCAAAAAAAAGCGTTCAGCACCAGAACTATTACCGTGTCCAGCATTTTGATGCTGTTGAAAAGCTTGTAGTGATAACTGTTGATACTTTTGGTTATCAGTACGAATTTCTGAAAAAGGCGGAATAAATTTCCTTTCGGATGCAGTGAGACTTTCTAGACCTTGACGTGCAACTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCAACTAAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 90-709 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGZT01000051.1 Fischerella thermalis WC119 NODE_84_length_1682_cov_27.838287, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 90 37 100.0 34 ..................................... AATTCCTAATCTAATTCATTCAAAGCGCGCGATC 161 37 100.0 35 ..................................... TAAGAAGGGTTGGAGATACAACTCACAGCTACTCA 233 37 100.0 37 ..................................... CATTTCGAGGTGAGAGATGGACAACATGAGTTTTAGT 307 37 100.0 35 ..................................... TCTTCCTGGGCTTTCCAGATGCCTCTTTTTGAATG 379 37 100.0 40 ..................................... TTCAATTGTGCTGCTTCGTGCGATCGCTTAATGGACTGGA 456 37 100.0 37 ..................................... AACTTACTAATTTCACACTCTACCTTAGCTCTAAGAA 530 37 100.0 34 ..................................... TCACCCAACTTAACAGACTCGATTTCCAGCAAAC 601 37 100.0 35 ..................................... CTGTGGGGGTCGGAGGGGTCTACAATCTGCCGCTT 673 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ======================================== ================== 9 37 99.7 36 GTTGCAACTTCAATTAATCCCTATTAGGGATTGAAAC # Left flank : GCACAGTAGATAACCTCAATTCATCCCTCTATTATGCAACGCCAGGGATTGAAACGATTCTCACCGGACTAAGGTAAAGGAACAGCTAAG # Right flank : TCCGTAGTATGCATTTGACAAATTAAAGCTTACTGCTTGAGATTAGAACTTAAAGGCGTTGCAGAGAAAGCGGGATGATTTTGTTTTATCTTTTAATTGACAAAAACTCAATCCTTGGCGCTCTTGGCGTCTTGGTGGTTCATTATACCCTGCGGGAAGCCGCTACGCGTCTACATCCCCATTTTATGCAACGCCCTGGCATTAATCCCTATTTGTTCACGTCTTGTAAACTTACACAACAACAGCCAAGCAAGACGACTATAAAATTTCTTAGTCTACTTCAAGTAGACTTGAACTATTAGCTCGCAGTTTACTTGCGGGCTTTCGGGCTTTCAGGCTTGCATATTCAAAAACAAAAAGGTAAGAGAAAAGATTTTTCCCTTACCCAATTCTCATTACCCTTGACACCGAAGCTTTAGTAAGCGCTGCGAGTAAATTGGTAATATAAGAAAATTGCAATAATCGCACCAATCACCGCTACGAACAGACCAGCAAGACTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTCAATTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //