Array 1 92429-94166 **** Predicted by CRISPRDetect 2.4 *** >NZ_NSKD01000001.1 Halovibrio salipaludis strain YL5-2 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 92429 29 100.0 32 ............................. CGCTCCGGACTCGCGGAGATCGGCCATACCCG 92490 29 100.0 32 ............................. AACGAACTGCACTACCGCGTGGGTGAGCTCGC 92551 29 100.0 32 ............................. CCGAAGACGACAAGACGCTCGGCGCCTGCGAT 92612 29 100.0 32 ............................. AGCCCTCTCAGCTCTTGTCTGTACCGCTCAAC 92673 29 100.0 33 ............................. ACCATGGGGCTGGTGGATGGCTGGATTGCCTAC 92735 29 100.0 32 ............................. GGCGCTGTCATCACCGTAGGAGTTTTTGAAGT 92796 29 100.0 33 ............................. GTAAGCTCAGTCCCTTCAGCGATTTCCTTGGGC 92858 29 100.0 32 ............................. TTCCAGAAGATCCGCTCCGGTCAGCGCAGCTA 92919 29 100.0 32 ............................. CAGGTTATAGAGACCTCTGAACTCATGCGAGT 92980 29 100.0 32 ............................. GAACACAAACGCACCTTTGCGCTTGCTACGCA 93041 29 100.0 31 ............................. GTTGCGGGGGCTCGTGCTCGTGCTGCTCGAC 93101 29 100.0 32 ............................. GTTGCGGGGGCTCGTGCTCGTGCTGCTCGACA 93162 29 100.0 32 ............................. TAATCGCCCTCGCTGGCGTTATCCCGCACGGT 93223 29 100.0 32 ............................. CGGCGCGTGTCGCAGAAAGTGGTGTTCAAAAA 93284 29 100.0 32 ............................. GTACGGGCGAACCTGTCAACACTGCTGATCGG 93345 29 100.0 32 ............................. CCCGGATCGTTGGTGTTAGCGCACCTACCGGG 93406 29 100.0 32 ............................. GCATCCGGGCGGAGATTACCCCGCCTGCATGG 93467 29 100.0 33 ............................. TTGTGCTGACTCTTGTCTTCGGGACCATCATGG 93529 29 100.0 32 ............................. CCATGATAACCATTGACTCCTGCACTGACTGG 93590 29 100.0 32 ............................. ACCAGCAAAACCAGCGAGGGCGCCGCATACAC 93651 29 100.0 32 ............................. GCGCCAGGGCTTCCAGGAAGAACAGGGCACCG 93712 29 100.0 32 ............................. GTCAGAGAACGGCCAGACCGAAGCCCAAAAAA 93773 29 100.0 32 ............................. GTCCAGGATCGACTGGATGACTTCGTGGTCAA 93834 29 100.0 32 ............................. GCTCAGGCGAGGCGCAGAACGCTCTGGAGAAA 93895 29 100.0 32 ............................. GAAATGGAGGTCGGCCAGCTCAGCCTTTCCAT 93956 29 100.0 32 ............................. TCGTCGAGATTCAGGGCTGGCTTACGCAGCAG 94017 29 100.0 32 ............................. TTCCCGCAGGTTCTGGATCTCGAAATTGAGCC 94078 29 100.0 32 ............................. TCCTGGTAGCCCTGGAGGTCCAGCGCGTTCTC 94139 28 79.3 0 .............C.......-..TTT.A | ========== ====== ====== ====== ============================= ================================= ================== 29 29 99.3 32 CCGTTCCCCGCATACGCGGGGATCAACCG # Left flank : AGAGATTACACCGCCTGAGCCTGCAGCGGACAGCCAACCTCCTGCAATCCCGGAGCCCGCATCTCCCGGCGACGAAGGTCACAGGAGCCAATAACATGGCGATGCTGGTTGTTGTAACCGAAAATGTACCACCTCGACTGCGTGGCCGGCTGGCAGTGTGGCTGCTGGAGATACGCGCCGGCGTCTACATTGGCGACGTTAGCAAGCGGATCCGGGAGATGATCTGGGAGCAAGTTAACGCACTTGCCGAAGAAGGCAACGTTGCCATGGCCTGGTCCAGCAACCACGAATCGGGATTCGAGTTCCAAACCTACGGCGAAAATCGCCGCATTCCAGTGGATTATGACGGCCTACGTTTGGTGCAGTTTCTTCCCCAAAACCCCAAATAGCTGATAATAAATAGTTCTTTAAAAAAGCAGTCTTGATTTTTGCCCCCGAAAAATGTCGTGCATTTCCCGGAGCATGAATTTCTGTTTTTAAAACAGGAATGTACAATTGGA # Right flank : AGGAACTCATAAGCCAAACCTTTTTCGGGCAGCAAAGAATCCATGAACAAGGCCAATAGGACAACCGTTGCACCCCACAACTTGAAATTGTTCACTTGACGCACACACATGCCCGCCGTACCGTTCGGGCAAACGTCATGGCAATGGAACTGTCTGCCGATGGACAAGGAAACCCGGAGCACCCTCCTTTCACGACCTCTACTGTGGCTCTTTCTCGCACCGATTCCGATAGCCATGACTGCCGGATTCGCGATGGCGGATGAGTCTTCATTGATATCCGCATACCGTGCTGCCTGCGAACGCATCGAAACCACCGTAGCCTCAGACTCCTACCGGAATGCCTCTGGGGAAGAGAAGAGGGAGCAGCTCCATAACAACCTTTTCAAAGGCATTCAGAGAGCAGAGGTCGTAGATGCTTTCCGTACCATCACAGCGGCAGCCCCATCAGAGCGATACGCAATCCTCAAGGAAGGGGTTGAAGAAGAAACCGGTCATCAGTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCATACGCGGGGATCAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCGTTCCCCGCAGGCGCGGGGATCAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //