Array 1 199006-200873 **** Predicted by CRISPRDetect 2.4 *** >NZ_QWDM01000010.1 Flavobacterium cupreum strain CCM 8825 NODE_10_length_209429_cov_16.270255, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 199006 46 97.8 30 A............................................. AATTCTGAATAATGATAAAATGTTCTATGG 199082 46 100.0 30 .............................................. TAGTCCTGCAAATTAAGCTTCATAAAATTA 199158 46 100.0 30 .............................................. ATTCGATTGCGTTTATGTATTTTGGTTGCG 199234 46 100.0 29 .............................................. AATTATAGCTACAGACGATTCCGAAACAG 199309 46 100.0 30 .............................................. GAGCTCTGTGGCTAAAAGCGTAAGAACCGT 199385 46 100.0 30 .............................................. AATAAAAGATTAGGAGGGTCGCTTTCTTTA 199461 46 100.0 30 .............................................. TTTTCTTTTACTTATTCGGCGCCATAGGGC 199537 46 100.0 30 .............................................. TAAACACAGTAAACACAATATATAAGTAAA 199613 46 100.0 29 .............................................. CAAAAGGCTAATCGCTTAAAAGGCAATTC 199688 46 100.0 30 .............................................. CAAAACTTTTTATAGTTTTACCCGATACTA 199764 46 100.0 30 .............................................. TTCGTACTCTGATGCCTTGCTCCCAAGGCT 199840 46 100.0 30 .............................................. GGCGCCACCTGCAAACTGCAAGAGCTTTCC 199916 46 100.0 30 .............................................. GACACTACCGCGATTGAAAATCCAGTTTGG 199992 46 100.0 30 .............................................. TTCGCTAATTCGACAGATAAGTCGTTCGCG 200068 46 100.0 30 .............................................. CCGTGCCTTGGACGCCCGAACAAGCGGCCT 200144 46 100.0 30 .............................................. ATTAACTGCGAGAACTATCACCGTTAGATA 200220 46 100.0 30 .............................................. CAACATGAATGCCGACGTCTATGCGATCAT 200296 46 100.0 30 .............................................. GGCAAGCCTGAGAAGTACGAGCACCTTAAA 200372 46 100.0 30 .............................................. TTCCCGGATCATTATTTGAAGGAGATTTAA 200448 46 100.0 30 .............................................. GCTGTTCCTGTTGAGGGATTTGTTAGTTGA 200524 46 100.0 30 .............................................. CTTTCGGGATACGCTTATTAAGATAGTACT 200600 46 100.0 30 .............................................. AAACATCAACAGCCAAAATAGCGCAATCGA 200676 46 100.0 30 .............................................. TGCAGCAAATAGAGCAGTTGGTGTTTTCAA 200752 46 100.0 30 .............................................. CAGCTCGAAAATCTACAAAATTTAGTTTAC 200828 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 25 46 99.9 30 GTTGTGAATTGCTTTCAAAATTGTATTTTTACTTATAATTCCCAAC # Left flank : ATCGTTTCTTTAACAATTTCGATCACGTTTACAATTTTTTCTTTGTACTTGCTTAGATGATTTTTTATTGATTTAAAGCTGTTAAAAATTTCATGATAAGTTTGTGATAATTTAAAATAAGCCTTGATGACTTTTTTGCTATTATTTGAACTTCCAATACTTTTTATTAGTTCTAATTCTTCTTTGATAAATGCATTAATTTCACACCCTAAATATTTGTTTTCAGATTCATTTTGCCAGCGATGCTTGTTTGTTTTTGAGATTCTTGATTTTAACTCTTCTGGCAGATTATCATACAATCCATTTCTAATATAATGTTTAACATTAGTATCCCATGAATTACGATTTATTGAAGAGATCATAAAAATATTTTGCGGCTAATTTTTTAATATAAGTAGGTAAAAATAGAACTCTTCTGATCAATTTAAATTAATTTGAATTAAATATTTTTTGAAATTTTCAGTCTCTAAATCTTTAAGCTTTACTGCCCATGAATTCCC # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTAGTTATATGTTTGTTTTGAAATTAAAAAATCGATTCATTTGACTGTTGAAGTTCAGTTAGTTAGGTTCTTTTTCAATCCTAATTTTAGAAAAGTTCTAGCTGTTGAGATGGTTTTTCTGTTTCCACAGGTTTTTTTCCATAAAACAGTTCCATCATTCCAAATTGTTTATCTGTGATTTGCATCACACCAATTTTTCCATGCTCAGGTAAGCTGTTTTTTATTCTTTTGGAATGTACCTCGGCATTTTCTCGACTAGCGCAGAAGCGCATATATATCGAAAATTGGAACATAGAAAAACCATCATCTAATAATCTCTTACGAAAATTACTAGCAATTTTACGCTCTTTGCGCGTTTCGGTGGGCAGATCAAAAAACACTAATATCCACAAACTTCTATATTGATTTAAACGTGTGTAATGCTCATCATACATAAATTGGGTATAAAATTCTTCTGGAACTTCCTTCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTTACTTATAATTCCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.70,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //