Array 1 159980-157513 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLHC01000006.1 Klebsiella pneumoniae strain k1664, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 159979 29 100.0 32 ............................. CTTGAGCAAGGCGCTTTTTCTCCTGGGTGACA 159918 29 100.0 32 ............................. TTCGGAAAGTTCTTTTTCAGCTGATCCGTAAC 159857 29 100.0 31 ............................. GAAAGACGTTTTAAGTTATTGAAAAAAACCC 159797 29 100.0 32 ............................. AAGAACCTTTCGATCGCTGCAATTATCTACGC 159736 29 100.0 32 ............................. GCGTGGACACGGATGTAGTGCTGGAGAAGGCG 159675 29 100.0 32 ............................. TTTACGGAATTGCTTAGGTCGCGAGAATGTCG 159614 29 100.0 32 ............................. TAGTCATTTGCCGGTGACGGAAACCCCATAGC 159553 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 159492 29 100.0 32 ............................. GTAATCCTGATATTGGCGTATCAATGGTCACG 159431 29 100.0 32 ............................. TAACCTCGTTTATGTGCGCGTTTTATAGTTGC 159370 29 100.0 32 ............................. TGCGGGCCACCAGGGTTGCAGGGTATCAATGG 159309 29 100.0 32 ............................. GCCCAGATCGGCTTTTCATCCCGAAGCCGGGC 159248 29 100.0 32 ............................. GACACCCGCACGCGCCGGGCAGGCGTGGAACT 159187 29 100.0 32 ............................. TCGTCGGGTTTATTGAGTATTCCGCCTGATTT 159126 29 100.0 32 ............................. CAGGTCAGCGCAATGTTCCGGGATATCGAGGA 159065 29 100.0 32 ............................. TTGTCCACTTCACGCCAGTAGTCTTTAGAGAT 159004 29 100.0 32 ............................. AATGGAGGTCCGGTTACTGCTGGAAATGTTTA 158943 29 100.0 33 ............................. ATCCCCACCACCGGCGCTGGCGAGTAGTACCGC 158881 29 100.0 32 ............................. GATTGTCTGACAGATAATGCAGCGCAATGCGC 158820 29 100.0 32 ............................. ATGTGAATTTCCTGGCCGGTTGGTAGTTTGAA 158759 29 100.0 32 ............................. TACTGAAACGGGTAATCAGCACAAATACCAAA 158698 29 100.0 32 ............................. CATCGCTTTATGCCGAAATGAGGATGATAGTG 158637 29 100.0 33 ............................. GAGCTTTCCTCCTCGTATCACTACCGCGCAGAC 158575 29 100.0 32 ............................. ATCAATTCCCTCATTTTTTTTCCTTTAGCTCG 158514 29 100.0 32 ............................. TTCATCTGGTAGCAAACCGCCATCGGGAAGAA 158453 29 100.0 32 ............................. ATTTTTTGGGGCACAATTTGGGGCATTTTTTT 158392 29 96.6 32 A............................ AGGGTTTCGATTTTATCGGGATAGAAATGAAT 158331 29 100.0 32 ............................. TGGCGGACGTTGTACCTGTGAGTTAATTCTTC 158270 29 100.0 32 ............................. ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 158209 29 100.0 32 ............................. TCCAGGGGCAAAGAATTGCCCATTATCGTACA 158148 29 100.0 32 ............................. TTTGCAATATCTGCCTGCGCCGCCGCCAACGT 158087 29 100.0 32 ............................. CTCGGATAAAATGCCTTGCATGAGGCGAACGA 158026 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 157965 29 100.0 32 ............................. TACGCAGCCGGATCCAGGAGCGCATGGACGCT 157904 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 157843 29 100.0 32 ............................. ACCTACCAGATCCACACCGGGCGCTGCGAAGA 157782 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 157721 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 157660 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 157599 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 157541 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCGGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //