Array 1 1052340-1054989 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP021880.1 Klebsiella pneumoniae strain JUNP254 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1052340 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 1052401 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 1052462 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 1052523 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 1052585 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 1052646 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 1052707 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 1052768 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 1052829 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 1052890 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 1052951 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 1053012 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 1053073 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 1053134 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 1053195 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 1053256 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 1053317 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 1053378 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 1053439 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 1053500 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 1053561 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 1053622 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 1053683 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 1053744 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 1053805 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 1053866 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 1053927 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 1053988 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 1054049 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 1054110 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 1054171 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 1054232 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 1054293 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 1054354 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 1054415 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 1054476 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 1054537 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 1054598 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 1054659 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 1054720 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 1054781 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 1054842 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 1054903 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 1054961 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //