Array 1 79433-79285 **** Predicted by CRISPRDetect 2.4 *** >NZ_NAHV01000007.1 Gilliamella apicola strain NO5 NODE_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =================================== ================== 79432 26 100.0 35 .......................... CCGATTTAGCTGATAACACTGCAATTACAGTTGCA 79371 26 100.0 35 .......................... CCGGTTACCGGGCGTGCACTACTCGGTACCGGCTC 79310 26 96.2 0 ...............T.......... | ========== ====== ====== ====== ========================== =================================== ================== 3 26 98.7 36 GTGTTCCCTGTATACACAGGGATAAA # Left flank : CTTATTGAAGAAGTTTTGTCCGCTGGTGGTATCGAACCGCCTCTACCACCTGATTATGTCCTGCCACCAGCTATCCCAGAACCTCAATCTTTAGCCGATAGTGGCTTTAGGAGTCGCTAATAATGAGTATGTGTGTTGTGGTAACTGAAAATGTTCCACCTCGATTACGTGGTCGTTTAGCAATTTGGTTACTTGAAATTAGAGCCGGAGTTTATATCGGTGACATATCAAAACCAATAAGAGAAATGATATGGCAACAAATTGTTAAACTTGCAGAAGAAGGCAATGTAGTCCTTGCTTGGGCGACTAATACAGAATCAGGATTTGACTTCCAAACTTATGGCGCTAATAGAAGGGTTCCGGTAGATTTTGATGGACTAAGATTAGTCTCTTTTTTACCTATTGAAAATCAATAGGTTAACGTTCTTTAAAAAATTAAAAAAATTGGTAGATTTTTGGGTCGCCAATAAATCTAAATAAAACAATTATATATATTTAGA # Right flank : CCATATTCGTCATTTTGCAGTGCTTTCTGCAAATTGTGTAGGGATAAATCAGCTTTTACCTGTTTTTTTATCTAACTAAAATCCTTTGTTGGATAAGTTATTGCTAATTTGCTCTAAGTCAGAATGTTCAGTTCTTTCTGAAACATTAAATAATTGAGCAAAATATTATACAGTTTTGTATCCATTTTGTTTTATTAGCAGTTTATCTAAAAAAGCTTGTCTTTCTGTTAGAATTGGATACCTTCTTGTTCAATAACAACACAATGATTTGATTATAATTAGTTAAAATAGTTTTTATATCATAAAGATCTTCAATAACTTGTTGCAATGATGGTATTGGAAAACACAATAAGGTGTAAAAGTAGATTTAATTTTTGTCTAATATCTTTATACTTATCGATAATTTGTTATAGGAAATAATATGTTTTTAATAGGTTTTTGAGATTATTTGCGTTAAAAGCATAGATTATGATAGATTTTTCTTATTTATTATGGATATT # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTGTTCCCCGTATACACGGGGATAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 30900-31111 **** Predicted by CRISPRDetect 2.4 *** >NZ_NAHV01000020.1 Gilliamella apicola strain NO5 NODE_20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 30900 29 100.0 32 ............................. CCATTTCACTAGATAACCTATTAGTTAAAACC 30961 29 100.0 32 ............................. AATTTGAAACGTTCCCGATATTGAGCTGATTT 31022 29 100.0 32 ............................. ACGAATCCGACGGCGATGGCGAGTGATTTTAA 31083 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 100.0 35 ATGTTCCCTGTATACACAGGGATAAACCG # Left flank : AAGATATATGGTGGAGTTTATAACCTGTTTGACAAAGATGTTTCAAATGCTGACTTCGGTAAAACTTTAGAAGGTCGACGTTACTTCATAGGTACCGAGATTAACTTCTAAATTAACTAATAAGTATTTTCCTATAAAAAAGATGACTGTTCAAACAGCCATCTTTTTCTATTTATACTAATATAGATTATTTATAATCCAAAAATAGAAATACCTTTTTACCCGCCGATAAAATAACTTAGTGCAATGCCAACATAGTAACTTTTTGCTATTTAATAAATCCTAATTATATATTTCAAGGTATTATTATTTTTAATCTAATGAAAAATAACAATTTATTGGTAGAATCCTATGAATATTAATTTTAACTATCTTTAATTTAAATTAACTAAATAAAAACATAGTGTTATAAATACTAATTTTATTGCAAATTAACCCCAAAAATCGGTAGAAATTTGACAGTCAATATTTTAATTATAAAACAGTATGTTATAATTGGT # Right flank : GTTCTATAAAGCTGGTTAGTCAGACTAAGAACGAAGAATTGGCTAAAATAATTAATGAAATGGATTACATCCCGTGGATAGCGGTATCAACTCCAAGAGGTGTTTATGCTCATGAGATGGGGCACGTGTTACATTATCAATATAAAGAAGATATGGATGATATTATCAAAAAATCATAGGGCGAGCTTGGGCATATGCAATTAGTAATTATGCTCTACATAACAAACGAGAATTTGTTGCTGAAGCGTTTTCGTTGTATATTGAAAATCACATAGAAGCTAAAAAGCGACTTTCTCCAGAATTATTTAAACTTTTCGAATCACTAGATAAGGACATTAAATGAATAAGTTTGATTTATTAGTTGAGCAAGCAACTGAACTGATTAACACCGAGCCACTTCCTGATGATGCAGAGGAACAATTGCAAAAAATTATCGACCAAGCTGACGACAAAACGGAAAGACACATGTTAGGTAGGCTTGCTGAAGCTCTGTTTGTTAT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCTGTATACACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: F [matched GTGTTCCCTATACACATAGGGATAAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 19055-18660 **** Predicted by CRISPRDetect 2.4 *** >NZ_NAHV01000038.1 Gilliamella apicola strain NO5 NODE_38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 19054 29 96.6 32 ............T................ GGAAAAATTATAAACGGAATATAGCTGACAAA 18993 29 96.6 32 ............T................ GGTATTATCAGTGAAGAGGACTGGCGTGAGAA 18932 29 96.6 32 ............T................ TGGTAACGAACGATTACCGCTAACAACTAATG 18871 29 100.0 32 ............................. AATAGTACAGGAGATATAAAATGGAAAAAAAT 18810 29 100.0 32 ............................. AAACCCTTTATCACGATTAATAGTGCGTTCAT 18749 29 100.0 32 ............................. GCGCATCGGTATTTGACAGGGCGTTCATTTCA 18688 29 89.7 0 .......................T..T.A | ========== ====== ====== ====== ============================= ================================ ================== 7 29 97.1 32 ATGTTCCCTGTACACACAGGGATAAACCG # Left flank : AAGGATAAGTTAAATTATTAGGTCCTCTAAAAGATGAAATGTAAAGCTATAGGTTGTTGCAATCACGCATACTCATCAACTGGTTATTGCTATCGACATTTGTATTTAGTTAAAGCGAATCGAATTGTAAGTAAAGCTGGGTCAATAATGTTCCCTGTAAACACAGGGATAAACCGCGTTACAAATGAACCTGTAAAACTAACCGAATGTGTTCCCTGTATATACAGGAATAAACCACTGATGCGTCAATTTACATAGTATTTTTTTGCTATTCAAAAATCATAATTCTAAATTTCATTGTTTACCATCTTTTTAATTATATGAAAAATATAAACTTATCGGTAGAATTCCGTAGAATCTAATTTTAATTTCCATCAACTTTAATTACTTAAATAAAAACATAACGTTATAAATACTGATTTTGATAAAAAATAACCTAAAAAATCGGTAGAAATTTGGGAGTCAATATTTTAATTATAAAACAGTATGTTATAATTAGT # Right flank : CAAATCCATCACAAATCCATCACAAACAGCCCTCGTGGCGGTTTTTCATTGCCCTTAATTTTTAAATAACATACCATTACCTAAAAAAGGAGATGGTATGAAAAGAATTGCATTACTAGGATTGGTTTGTTTTGCGTTGTCTGGTTGTGGTGATGATGGTGGCGGTAAAGTTACTAATGAGTTTTTGGTTGGTAAGTGGGAGTGTAAATTGGACGGTTACAGATCGAAAATGAAAAATGGAAAATTTACTGATTATGTTAGCGATGGGTTTAATATAATAAGGAAGAAAGAATTCAAAATAGAAAATAATAAACTGTATAGTATAAGTAAAACTGAAATGGATGGACTTAGTTTTTGGGAATCGAATGATTGGGATGAAAGTGATATAACTATTACTCATACGGGGCAAACAGTAGAGAAAAAGGAAAATAATCTAATAGAAAAATCAACCAATTCTCTAATTAAAAAATCACATGATACTTATTTAATGATTGAGGAAT # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCTGTACACACAGGGATAAACCG # Alternate repeat : ATGTTCCCTGTATACACAGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTGTTCCCTATACACATAGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 16782-17422 **** Predicted by CRISPRDetect 2.4 *** >NZ_NAHV01000043.1 Gilliamella apicola strain NO5 NODE_43, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 16782 29 100.0 32 ............................. TCTTGCTGCTCTTTAATTGATTCATCCCGTGA 16843 29 100.0 32 ............................. ACAGAGGATGAGCTACGGGCTGTTTACGCAAA 16904 29 100.0 32 ............................. AAATCAAATTTTACAGTATTATTTTGAGTCAT 16965 29 100.0 32 ............................. GACGAATTAGGGACGCCTATCAGAAAATTATG 17026 29 96.6 33 ............................A GATATCGGAATCCGTTTATCTCGTTGTTACTGC 17088 29 100.0 32 ............................. CAATGCGGAATTAATAAAATCAACATCTTGCG 17149 29 93.1 32 ............CA............... TGGGTTACAGAACATCAAGAAAACATAAAGGA 17210 29 93.1 32 ............CA............... CTCTGTTTGAGTTAGGAATTTTGCTAATGAAT 17271 29 93.1 33 ............CA............... TGGTGCAGACCTGAATAATGCGTCCCTTTATAG 17333 29 93.1 32 ............CA............... GCACTGCAGCAGATATCGGCGCCGAATCATAT 17394 29 96.6 0 .............A............... | ========== ====== ====== ====== ============================= ================================= ================== 11 29 96.9 32 ATGTTCCCTGTATGCACAGGGATAAACCG # Left flank : TCAGTATAAAAATCAATGAATAATTCAAATTAACTTTATGTTTATAAAGAAAACATAATATTTGGTTAATATAAGCATTTGTTTTAATATCGAGTAAGAGATTCGAAATAACAGAGTTTACTTAATAGCTTTCACTTAAAAAATATATTGGAGTATTTAAAGATCGTTGAGATGATATTAACTAAAAACGAGTATATGAATCATAGATTATGAAAATTTGGTAACTAAGATATACAAACAAACCACTTTAAAAATAGTGTAATTTTGATAACAACAAAGCACTAAAAACATCTCAATAAAACTTATTATTTTTTAACTGAATGAAAAATATAAGCTTATCGGTAGAATTCCGTAGAATCTAATTTTAATTTCCATCAATTTTAATTACTTTAATAAAATCATAATGTTATAAATACTAATTTTGATAAAAAATAACCTAAAAAATCGGTAGAAATTTGGGAGTCAATATTTTAATTATAAAACAGTATGTTATAATTGGT # Right flank : GCTTATTTAGCAACATAATCAATGGGTCCATATTGGTTTTAGTCTGAATAACAACCGTTAAATCGTGTTAACAGCAATCAAACAGGGCGGTAAAACTGTTTACGTGAATGGGTTGATTTAAATAACTGTCCACAAAAAGGATAATACTATGTTTAAACGGCTTGGAATAATCAACAGAAAATCATAGTGAGATAGTGTTAATGTCTCATGGTAATGAGACAATTTTGTTAGTTGTAGAGACGTATTTATTTGAAGAGATAATTGTATCATGGGTCATAGCAACATTAATTACCATATCTATTTTTTATTTATACGCAAAATATGTTAGTCCTGAAATTTGGAATTATATAGTCGCGTTTTTATTTGGATGATGTATGAATAAATCAAAAATATTAGGTGCCGCATTAATTGTCGTTATTTTTGTTCTAATTATTTATTTCGGTTACAACAATTATCAGGAAAAAATAGACTCAAAAACGATAAATTAGAATTAACCAATA # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCTGTATGCACAGGGATAAACCG # Alternate repeat : ATGTTCCCTGTACACACAGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTGTTCCCCGTATGCACGGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 14443-14715 **** Predicted by CRISPRDetect 2.4 *** >NZ_NAHV01000051.1 Gilliamella apicola strain NO5 NODE_51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 14443 29 100.0 32 ............................. GACAAGGCGTACAAGCTTTCGGACGGGCGAGG 14504 29 100.0 32 ............................. CGTAATAGACCCAACCGATGTTGCAGCAACAA 14565 29 100.0 32 ............................. GTTTAGATAGACTCGATGCTTCGTCTAAAAGT 14626 29 100.0 32 ............................. TAAAAATATGTTCCCTTGATATTGACACCTTA 14687 29 89.7 0 .......................T..T.A | ========== ====== ====== ====== ============================= ================================ ================== 5 29 97.9 32 ATGTTCCCTGTATACACAGGGATAAACCG # Left flank : TATCATTTTTAAGCTAAATTAAAATTATTAAAATAATCAATATAGTTATTGTTAGCAACCGATTCGTTAATATCAGCTTAATAACATTAATTATGCTTTCAATAAAAATATTGGTTAAATCAATATGATTTGATTAGAAAATAACCTAAAAAGTTGATAAAAATTTTAATGTTGCTATTTTAATTATAAAACAAACAGTTATAATTAGAGTGTTCCCTGTATACATAGAGATAAACCGTCGATGTGTTAATATTGCATATCATTTTTTTGCTATTCAAAAATCGCAATTCTGTATTTCATTGTTTACTTTTTTTAATTACATGAAAAATATAAACTTATCGGTAGAATCCCGTAGAATCTAATTTTAATTTCTATTAATTTTAATTAATCAAATAAAAACATAGTGTTATATATTATGATTTTGATGAAAAATATCCAAAAAAATCGGTAGAAATTTGACAGTCAAGATTTTAATTATAAAACAGTATGTTATAATTGGT # Right flank : AATAGTAGGCATAAATTTTTCCTACAGTGCTACAATTGGTTGGTATTTGTAAAAAAAATATTGCTACCGCCATCGACCAGTTGAATGATTTGTGAGAAAAAACAAAATCGCCTGATGAAAAGCAACTATACCCTATTACCATTACAAAATTGCAGGGCGCGCAAAGGTGGGCAGTCAAGGCCTTAACGATTCAGATACCTGCTCATAACCAAATATCTATTTACACTCATTAACACAAAAAATCAGATTAATACAACTAATATGTATAAAATATATACATATTCACAATAGATATAAAGACAATGTGAGGATGTAGTATGACCAAGCAAGTAGCTGTTTTAGGAGATATGACCAATTATGGCGGTAGGATTATCACAGCGTCAGGGCAAGGGTATTGTGGTATGGATGGTGTTGCTCTATTAGGTGATTTGGTTTCCTGTCCTAAATGTAGCAGTACTGGCAGAATCATAGAAGGGGCAAACGATTTTATTATCGATGGC # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCTGTATACACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: F [matched GTGTTCCCTATACACATAGGGATAAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //