Array 1 526164-528422 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAUI01000005.1 Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 strain type strain:DSM 6643, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 526164 37 100.0 35 ..................................... TTCTGCTTTATATCCGTAAGCAGTCGGGGTGTCAG 526236 37 100.0 34 ..................................... TACTGATTATTATTTAATAAAAGCACAAATTAAT 526307 37 100.0 35 ..................................... TTCAATAAAGCTAAAGCAAGAGCAGAGTTATCGTT 526379 37 100.0 35 ..................................... AAGCCGAGAATGGAAGTCACAGTTATTTGCCCGAG 526451 37 100.0 35 ..................................... AATGAATTATGTTGGCTTGTTTCGAATAATCAGAG 526523 37 100.0 34 ..................................... TGCTTATCAACAACAGAAAATGAGCAGGTGGCTC 526594 37 100.0 35 ..................................... TTTTTCGTATTGGGATGCAGCAAGTTGGGAGTCAA 526666 37 100.0 34 ..................................... TGGTTATGAGGTTATTACCGATAATGATATAGTA 526737 37 100.0 35 ..................................... ATTGATAACTAGTTGATGATATGCAACTAGATGCT 526809 37 100.0 34 ..................................... AACCAAGTGCTGAAACTATTGCGAGAATAAGGAA 526880 37 100.0 34 ..................................... ACGAAAGTGGTCAATGGTTATCATTTGGCCCAGT 526951 37 100.0 34 ..................................... TCGCCGCATACTCGGCAAATTAGAATTTTGTAAT 527022 37 100.0 34 ..................................... TGCATTGGATCAGTCTGCACGCTATCTTTAATAT 527093 37 100.0 37 ..................................... AATAATAATCTGATCACCTTTATTAAAGTAGTTTCCA 527167 37 100.0 36 ..................................... TGCTTTCTAACCTCAAAACCTTCATCGTCTGTTCTG 527240 37 100.0 35 ..................................... CAAATATCATTGTCAGCTTTATTTAAGCAATAAAC 527312 37 100.0 37 ..................................... CTGTTTTTCTTTCTCGTTTTCTAAAGCCATATAAATT 527386 37 100.0 35 ..................................... CTTAGCCAAATCCCTGACGAGATTAAAAAGTTAGA 527458 37 100.0 33 ..................................... GGCTCTGATTATTATGCAGCTAAACAGTTTGGA 527528 37 100.0 35 ..................................... CTTTACAGTTAAATCGTGCTGACGTAAAATTTTTT 527600 37 100.0 34 ..................................... TATCAGAAAGAGAAAAAGAAATTGAAGATTATTT 527671 37 100.0 30 ..................................... ATATTTTCTATATCTGTATTTTCCAGTAAT 527738 37 100.0 36 ..................................... AACTAGTGTTGAAAAAACAAATGGCAAGTTAAAAGT 527811 37 100.0 35 ..................................... AAAATGGCTTTGACTGATGCAATAAGCATAGCTTG 527883 37 100.0 35 ..................................... AGGCCACTTGATTTCATTGATTTGTCAATTGATGA 527955 37 100.0 35 ..................................... TTCAAATGCGAGGACCAAAGATGGAAAGAGATCAG 528027 37 100.0 35 ..................................... AGGTAATGGAGTTGTTATTAGGAGTCTGTGATGGA 528099 37 100.0 35 ..................................... TGCTGTATCGTGATTAACAGTAACCTGATTGTTAA 528171 37 100.0 35 ..................................... ATTGAAAGCGTCAGCTGTAGCGCGTATCCTCCCAT 528243 37 97.3 35 ...................A................. ATTTCATCAGCATAAGTCAAAGCAGAAGAGATGAT 528315 37 100.0 34 ..................................... CGACATTGACATACACCCCCTTGATTTTATCCTT 528386 37 78.4 0 .........................TGTTT...TC.A | ========== ====== ====== ====== ===================================== ===================================== ================== 32 37 99.2 35 ATTGCAGTCCCCTTTGTTGGGGGCTGAGAATTGAAAC # Left flank : TTATTTATCAGTAAAGGTGTGATAAAATTGATGTATGTTCTAGCATACGATATTTCAACTGAAAATGCTAAAGGTAGAAAAAGATTGAGAAAAGTTGCTGAAACCTGTGAAAATTATGGGCAAAGAGTTCAGAAATCAGTTTTTGAATTCCAATTAGATGATAAAAAATTTTTAATGATGAGAAATGAAGTATTGGAGTTAATGAACAAGAAAAAAGATAATATTAGGATCTATAAAATAATTGCTCCAAAAGATAATTATGTGGAAGAACATGGGAACTTTAAGTCTGTAGATTATGATAATGATACACTGTTAATTTAATTTGCGAAGGGGGAGTGTTTGTTAAATTACTGCTTCTTTCGCAAATGCTCATAAATACTAATCTAAAAGGCATTTGAAGGAGATGAAGTAAAATGATTTTATTTTTTGTGGAGGTGATAATAGATATTCGCAAAATAACCTTTATGAATCTTGATTTAACAGGGCTAATTTAGCCTGCT # Right flank : AGTAAAATTTGAACCTTTTATTAATTGAAAATTGACCCGAGTAAGCAAAAAATAATATTAATTTTATTGATCCAGCCATTCTTTAGTTTCTTTCATTCGGTAAGAGTTACCATTCATATTTATTACATATGATTTGTGAATCAATCTATCTACATAGCTACAATTTTTGCTTCGCTTTTAAGTGTCCTTACTGCTAATCTATGAAAACAAGGATTGGAAACAAATATGTAAGCAATTTAATTTCATCTTCAAGCTTAAAGGACTATAATAATATTAGATTTGAGAGAACAAATATAAATTCTGGAGGTTTTAATTATGCAATCTAAAAGAAAAGACTTAGTAAAGTCAGTTATGATAGCAGATGCACTTTCATTCGGATCTCACTGGGTATATGATACAGAAAAGCTTGCAGATAACTATTCAGGAATTATTAAGAAATACACTACTCCGATGTCTAAGTTCCACGAGAGTAAAAAAGCAGGAGATTTATCTCACTATGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAGTCCCCTTTGTTGGGGGCTGAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //