Array 1 639106-637470 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJKD01000001.1 Hungatella effluvii strain DSM 24995 Ga0244553_101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 639105 33 100.0 34 ................................. CACGGTCAGGGATAGGTCTATGGTCGGCAGCTCC 639038 33 100.0 33 ................................. TTCCGAAACTCTGGATAACGTTCCGTCTCCGGT 638972 33 100.0 34 ................................. GCATATTCCAAAGACATACAGATCCATACTCATC 638905 33 100.0 34 ................................. GCTTAATTTTTGTAATCGGTCTATTAGCTCTTGT 638838 33 100.0 34 ................................. TCCTTAATCCCGCAAAAGTGCTTGCACTTGTATG 638771 33 100.0 33 ................................. CTTTCCCGGTGCTGATGCATAGCGTTTTGAAAA 638705 33 100.0 34 ................................. TGCTCAGACTCCTAATTCTGGATTTGCTATTTTA 638638 33 100.0 33 ................................. GGTTGCCTGGGTACATCTGGAGCGTAATCCAGC 638572 33 100.0 33 ................................. CTTACGCTCCGATCCCTCATAATAATTGGTCAA 638506 33 100.0 33 ................................. CTCATGATGGCACAGTACATAAAATAGGAAAAG 638440 33 100.0 33 ................................. GAGGAAGTTATCAGTAATTTTGAAAAACTTGGT 638374 33 100.0 36 ................................. ACTTGTTGCCCGGTCGTGTCCGGTGATGTCTCCCTC 638305 33 100.0 34 ................................. TTCCGTACTGAGCCCAGATTTCTTTCATTCTCCG 638238 33 100.0 33 ................................. TGCTTATTGAGGATATCCATTTCTTTTTCCGGA 638172 33 100.0 34 ................................. CCGTGTATCGTACAGATTCCGAGGGGCTTCTTCC 638105 33 100.0 34 ................................. AAAAACATCCATTACATAATTCCCACTTTATTTT 638038 33 100.0 36 ................................. AATGTATTCGCCTCCTTTCCTGTACCCGTTGAGAAC 637969 33 100.0 34 ................................. TCTGCATAATCACAGGGTATTGACCGACCAGCAA 637902 33 100.0 34 ................................. ATACGATGAAAGTTGAGGTGATGACTGGTGAATG 637835 33 100.0 33 ................................. CCTAATGGCTGCAGCACGTTTTTAAACAGCAGT 637769 33 100.0 34 ................................. GATTAATAATAAGAAAAAACATGGTTTAGATACC 637702 33 100.0 34 ................................. AGGATATATGTATCGGGCCTGCCCGGTATGATTT 637635 33 100.0 34 ................................. AAAAGAAAGATATGACCAAATCGTACACAAACAG 637568 33 100.0 33 ................................. TGAATTGTTGGCAATACATGACTATATGTCTCC 637502 33 97.0 0 .........................C....... | ========== ====== ====== ====== ================================= ==================================== ================== 25 33 99.9 34 GTCACCTTCTGCGAGGAAGGTGTGGATTGAAAT # Left flank : TTTTTATGATAAGGAGTACAGAAAGGCGTTGAACATCTGCGGAACAAAGTCCGGACGTGACTGCGATAAAGTGAAGGAGGCAGGTCTGACGCCCTATTTTATCGACGGTACCACAGCATTCGAGGAAGCAAATATGATTTTTGTCCTGCGGAAACTGTACTCCGATCCCATGCCGGCTGAAAATTTATTGGATCAGGAAATAGATCAGAAATGTTATCCGAATAAAGACTATCATACTATGTATGTGTCGGAGATTGTGAAAGTGCTTGTGGCAGACTGCCAGGCTGTCTAATTGTGAAGGGATTTTTAGAAGATGGGGAGATAAGGAAGTGAAATGCTGGTGCGAATCTCAAGTAAACATGAAAATACTGGGGGATTCGCACTGGGAAAATGAGGGAGTATGAAGCAGAAGGAAGATAACTATTGATTTTTCTGAAAAATATTGTACAATATAGTTAAATATGTGGGTGGGTAGTGGGGGAATGTTGTGGAGAATTGCT # Right flank : TTCGAGGAATATATGGATTGAAATAACCATATCCCCCCTTCCAATCTCTCATCACAACAAAAAGAACCTTCAGAAAGCAAATGCTTCTAAAGGTTCTCTTTTTCTGATAACAATATCCTCTCTAATCCCCAAGATAATAAACCGCCGTAAAATACCCCTTACTATTATAATAAAGCGCATTCCCAAGTACGCTGCTGTCAGCCAGCGCCTCCGTCTCCCAGCCACTCTCTGATGTACCAGCACAGATCTCCGTCTGAGTTTTCGATGCTTCTGCCAGGCTGGTATAAGCGCCTGTCACGGCCCCTTTCAGAATGTAAATGTCCCCCTCATATACCGTCTTCATCACAGTGTCTGCGCTGGTCTGCCACAAAGTATAGGTTCCATTTTCCAGATCTGCGATGACTCCTGTTTCACTGCCGTGTGAGGAAGGCGTTGTTCCCTTGTCATACATTAGATAGCCGTATGAATTCGAGTCCCCTGCGTTGGGATCCAGGGAAAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCTTCTGCGAGGAAGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 81004-82910 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJKD01000011.1 Hungatella effluvii strain DSM 24995 Ga0244553_111, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 81004 33 100.0 34 ................................. TATTGGTGTTTCTGGGTCTACGGGTTCCGGATCT 81071 33 100.0 33 ................................. CTTTGTACTATGTATCTGCTATTTGTCATTGTC 81137 33 100.0 34 ................................. AAAGGTTTATCGGGACATCTACGATCAGATTAAG 81204 33 100.0 35 ................................. GCCTGACTGATAACGATCAGGCCGATGGCATCTTT 81272 33 100.0 34 ................................. TGTAAGTTGACGCCTCCACTGTCATATGTAAATG 81339 33 100.0 34 ................................. GGGTAATACTAGACCGGAACTTCCTCACCCACGG 81406 33 100.0 33 ................................. AAATTATGCATCGCTTTTATTGGAGATATCCGG 81472 33 100.0 33 ................................. CTGTAGCTACCGGGCTTTGTGTTTTAGCTTCTT 81538 33 100.0 35 ................................. CGTAAGGGAAAATTATCTGTGTAGTACTCTCCTGT 81606 33 100.0 34 ................................. ATGTACCGTGGTGTTGATGATGTTATGAATGCCC 81673 33 100.0 34 ................................. AACTGAGATAATGCGGTACCCTTCGTATAACTGC 81740 33 100.0 34 ................................. TCCCAATCAATATCATCTCTCTGTATAAGCGGTA 81807 33 100.0 35 ................................. TCTTTACGATGTTGTATTCAAAATTGACTGCAACC 81875 33 100.0 37 ................................. CTTCATGGACTGCGTAAAATACCCGTAATCCAATATC 81945 33 100.0 35 ................................. ATTCTTTTTTAGCAACCGTTTAGCCTCTGCATAGC 82013 33 100.0 34 ................................. GTTGCAATTACATCAGCATCAAATAAATCGATCC 82080 33 97.0 34 .....T........................... CAGGAAGTAGAGCAGCCTTCCAGCGAGTTTGTCT 82147 33 100.0 33 ................................. GTCAGATACCGGAGCCACGAATAGAACAGTGTT 82213 33 100.0 33 ................................. CAGTTGGATTATCATTTTGCTATCTCTCCACAT 82279 33 100.0 34 ................................. TTCAATAGAGCGGCAAATCTTCCCCTTCCAGATA 82346 33 100.0 33 ................................. CAGTTGGATTATCATTTTGCTATCTCTCCACAT 82412 33 100.0 34 ................................. TTCAATAGAGCGGCAAATCTTCCCCTTCCAGATA 82479 33 100.0 34 ................................. AGTCCAGATGATCTTTGCCTGATCTCTCTTTGTG 82546 33 100.0 33 ................................. GTGGGTAAAGTTGCAGGAAAGGGATTATCTACA 82612 33 100.0 34 ................................. TTTAACTGTGATCTCCTGTACGCCAGTTCGTAAT 82679 33 100.0 33 ................................. AGCGTTATGACAATATTACGCTTATCTACCCTT 82745 33 100.0 33 ................................. ACCGCATTTGCAGGAGAATGGAAGCAGGACGCA 82811 33 100.0 34 ................................. CACATAACGCCGTAGACCGTTTTTTCTTTGTAGC 82878 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 29 33 99.9 34 GTCTCCGCTAGCGATAGCGGAGTGGATTGAAAT # Left flank : CGCCATTTTTCTGGAAGTAGGAGGTATTTTTCAAAATGTTAGTGCTGATTACCTATGATGTAAATACCGAGACCGCTGCGGGAAAGACAAGGTTGCGTAAAGTTGCAAAGCAATGTGTAAACTATGGTACCAGGGTACAAAATTCAGTTTTTGAATGTATTGTGGATAATGCCCAGTGCGTGATGTTAAAAGCGGTGTTAAAAGATCTGATTGATGTGAATGTTGACAGTCTGAGGTTTTATTATTTGGGTAACAAACATGACACGAAGGTGGAACATTTTGGTGTAGAGAAGGGAGTAAATGTAGAAAAACCTCTTATCTTTTAGAAGCGAATTTATGGTGCGAACCGGAAGTGATCATAAATTCCCTTGTAGGTTCGCACCGGAAATTTTGGGGTTATGAAGGGAAAATTGGGAAATTGGATATATTGATTTAATGAAATGTGTGCAAATTGCGCATGATTATTGCTGGTTATATGGTATAATATGTGCGAATTTGCT # Right flank : TAAAACTTGATATACTTAATAACATCGTATACGGCAAATAATTAGTACCGTGCTAGTTTTATTTATCCATGAGATAATAACTCCAGAAAACTACAAGTTTTTTAAAGGAGCTATCTTATGGATAAGATCACCCATCAGATCCGTGCAGAGCACTGGACCAAAGTCCTGAATGAATGCATAAACAGCGGTATGTCCAAAACTGCCTGGTGCAGAGCCAATGGGATTTCAGAAAAGCAGTTATTCTACTGGCAGAAGATTCTGCGCAGGGAGGCTTTCGAGAATTCCAAGGCCTCATTACCGACAACCGCCGCATCACACCCGTCGCTGGTGCCAACGACTCAGGGGACGGTCTCTTTTACCGAAATCAAACTCCCTTCATCTCCCCGGAGCGCGAATCCGGTTTTCCATCCGGATCTCGTGATTCGAAAAGGGGAGATTATCCTGGAAATATCGAATTCCGCTTCGGATGCTCTCCTTTCCCGGATCGGAGGGTTCCTGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTAGCGATAGCGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.20,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 2 87723-87957 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJKD01000011.1 Hungatella effluvii strain DSM 24995 Ga0244553_111, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 87723 33 100.0 34 ................................. TACTGCTACTGTCAATAAAGGTAATATGTTACAG 87790 33 100.0 34 ................................. AAGATCGTCTATCCGGTGTTTCGCAGATTTCGTT 87857 33 100.0 35 ................................. ACACCCCCAGCCATGAACATCACAGCTTTGTAGAC 87925 33 75.8 0 ........C.T..C....T.T...TT..A.... | ========== ====== ====== ====== ================================= =================================== ================== 4 33 94.0 35 GTCTCCGCTAGCGATAGCGGAGTGGATTGAAAT # Left flank : GGGCATCCTGTCTGATGCCTGCCCTACCCGGATAGAGGAGCGCTTCCAATGTTTCGTTGGATGTATCCTCGCCGACCGGCCAGTTGATGCTAAGCGCTTTAGCCAGGTTCAACACTTCCTGCACCGTGCTTTTTGAAGGGAGTTTGATTTCGGTAAAAGAGACCGTCCCCTGAGTCGTTGGCACCAGCGACGGGTGTGATGCGGCGGTTGTCGGTAATGAGGCCTTGGAATTCTCGAAAGCCTCCCTGCGCAGAATCCTCTGCCAGTAGAATAACTGCTTTTCTGAAATCCCATTGGCTCTGCACCAGGCAGTTTTGGACATACCGCTGTTTATGCATTCATTTAGGACTTTGGTCCAGTGCTCTGCACGGATCTGATGGGTGATCTTATCCATAAGATAGCTCCTTTAAAAAACTTGTAGTTTTCTGGAGATTATCTCATGGATAAATACAACTAGCACGGTACTAATTATTTGCCGTATACATAACATCTGAGAAAAT # Right flank : TCGTAAGATTATTGCAGAAATAAACCGTTGAGGGGACTCTATCAGTAATAGCAGAGTATATTAAATTTATGCAAAAAATCAGTTCACAGACGATAAAAGTAAATAGATAGGTTAAGGAGAGCAAAGAGTGAAGTACATTTTTATACATGGACTTGGACAGGGGCCAGATAGTTGGAATAAAACAGTTTCCTGCATGAGAGAACAGGAAGAGATTCAATGTTTGAACGTATTTGCATTTAAAAAGGGATCAGAGATTTCATACAGAAAAGTATATAAGGCTTTTTCGGCGTATTGTGAGTCTATAAAAACGGAGTTTGGTCTTTGTGGTCTTTCTTTGGGCGCTGTGATTGCGTTAAATTATGTGGTGGAGCATCCGGGAAGGGTAAAGTCGCTGGTCTTGATAGGGGGACAGTGCGTGATGCCGAAGGGGCTTTTAAGATTGCAGAATATGATATTTCGGGTGATGCCAAATGGGATTTTTAAGAAAATGGGGATAGGTA # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:0, 3:3, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTAGCGATAGCGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.20,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //