Array 1 207223-208537 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNHL010000004.1 Flavonifractor plautii strain D52t1_170925_G2 NODE_4_length_234543_cov_11.8375, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 207223 33 100.0 35 ................................. ACGTGGGATATGGCACAGCGTGTCAAGCCGCTGCT 207291 33 100.0 35 ................................. CGCGGCTCAGTTGAAATCCCGTTGTCGGAGGTAGA 207359 33 100.0 34 ................................. TCATCAAGAACTTTTACCAAAAACTTGATAAGCC 207426 33 100.0 36 ................................. TACATACACCCCGTCCCGGTATTGGTAGCACTCCCC 207495 33 100.0 34 ................................. TTTGCTATATTGTCTCCCCTGGATATGCCGGTGA 207562 33 100.0 34 ................................. ACCTGCTCCAGCTCGGCCTCTTGCTCTTGTAATA 207629 33 100.0 35 ................................. TTTTTCTATGGCTTCCAGGTCTGCCCCCGCGTACT 207697 33 100.0 33 ................................. CGCCACCCCTCATTGGTGCAGACATACCGTCGC 207763 33 100.0 35 ................................. GGAACGCAGGCCGAGCGAGTACACACCAATAAGGA 207831 33 100.0 35 ................................. CTCGAAGTCATGGAGCAGATCCACATGTCTGATGA 207899 33 100.0 34 ................................. AGCTTATCGTTTATGTTCAAGCAGTCACCCCCAT 207966 33 100.0 36 ................................. TCCGATTGCCCATAGATATTGTGCATACACGCTGTC 208035 33 100.0 34 ................................. AGGTGCTTGTAGTAGCCGGAGCGGAGGGCAAGCT 208102 33 100.0 34 ................................. AATCCATGCGCGACGAGCTACCTTGATTCTGGCA 208169 33 100.0 33 ................................. TACCCACATGCCACCATCGTTGCGTGGGGCAAA 208235 33 100.0 34 ................................. ATCAAAGTGAAAACAGAAAGGGGGACGCCGGACA 208302 33 100.0 33 ................................. GATGTCGACAACCCCGAGCTGATGGCTGCTATC 208368 33 100.0 38 ................................. AGTGAGAAATACGACATCACCAAGCATCCCCGGTATAA 208439 33 93.9 34 ............A............G....... CAGCGGCTGGACCGCGGCCACATGGAGTATGTCT 208506 32 93.9 0 ..............-................C. | ========== ====== ====== ====== ================================= ====================================== ================== 20 33 99.4 35 GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Left flank : GGACGCCTATCCGCCCTTTTTGTGGAAGTGAGGCCATTATGCTGGTTTTGATTACCTACGATGTCAATACAGCGGATGCCGCCGGGCGCAAACGCCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAGCGGGTTCAGAACTCCGTCTTTGAGTGTAAGCTGGAGCCAGCCCAGTATAAACTCCTTCAGGCCAAGCTGTGCGCAATCATGGATCCCGAACGGGACAGCCTCCGCTTTTATTCCCTGGGAAATCGCTATGAGCAGAAGATCGAACACTTTGGCTGTAAGCAGACCTACCTTCCAGACGAACCTTTGATTTTGTAGCGTGCGAAGTCCAAGAGGACACGCCTTCTCCGGCCGGTTCGCACCCAAAAAGCATAAAGGAAAGCTTCATGGAGCATAGGCGCGTTTGTTTTCGTATGCTCAGCCTTCTTCCCCTTGTGCAAATAAGCAAATTGAGCCAAGCAAACTCTCTGCTCTTTGGTAAAGTTTGCT # Right flank : TGTCTTACAGGGGCGCCTGGTCAGTTTGCAGGAGACGCCGCATAGGGGCGCGGGTCGATTCAAATTTTCACCCCGCGCCCCTGCTGTTTGCGTTTCTTTTCGTTGACTGGTATAGTAGGGAATGATATAATAGGATGATTATGACAAAAACTATGGTGGGAAGATCATATTATGTGGATTTCAAGTGACTGGAAGGACTATGAGCTGCTGGACTGCGGCGGCGGCGAGCGTCTGGAGCGCTGGGGCAAGTATCTGTTGGTGCGGCCCGATCCTCAGGCCATCTGGCGTCCGGAGGGGCGGCATCCCGGATGGCGGAGGCACGACGCCCGGTACCAGCGCGCCTCCACCGGAGGGGGCCAGTGGGTCAAGAAGGAACTGCCCCAGCGCTGGACATTGGGTTACAAGGGGCTGACCCTCAACATCAAGCCTATGAACTTCAAGCACACCGGCGTCTTTCCGGAGCAGGCGGCCAACTGGGATTTCGCCATGGAGCGCATCCG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //