Array 1 180475-178001 **** Predicted by CRISPRDetect 2.4 *** >NZ_WVHT01000003.1 Pedobacter sp. HMF7647 3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 180474 46 100.0 29 .............................................. GCTGAATAGTTCTCCATACATGAATCATT 180399 46 97.8 30 ....................G......................... CTCAATCTTTTCCTTTCTGGTAGGCTTGCG 180323 46 100.0 30 .............................................. CTCAATCTTTTCCTTTCTGGTAGGCTTGCG 180247 46 100.0 30 .............................................. TGCCTGGGTGAGCATCCTGCATAAGAAGCT 180171 46 100.0 30 .............................................. ATTTTCCATGTGCATAGCTACCCATGCAGG 180095 46 100.0 30 .............................................. GCGTCCAGCCGCGGTAGAATCTATGGACGT 180019 46 100.0 30 .............................................. CAACAATTTTTGATATTGCTCGGCGTTTTC 179943 46 100.0 30 .............................................. GTACAGACTTTTTAGTAGAGGTTAGCTGCT 179867 46 100.0 30 .............................................. AGCCCCGGCAATAATTAGCCTTTCTTTATA 179791 46 100.0 29 .............................................. TTTGCGCGTAGGGGAAATATTGAACAGTA 179716 46 100.0 30 .............................................. CTTATGTTTAGGTAGCTGAATATGCAGCTT 179640 46 100.0 30 .............................................. AATCTTCCTCCGACTGCCATTAGTCCCGGA 179564 46 100.0 29 .............................................. CCGATCGATGAGCAAAAGCAGCAAATCTG 179489 46 100.0 29 .............................................. TGTTTTCTTTTTATCCCAACGTTCTTTAA 179414 46 100.0 30 .............................................. TGCAGATCTCCGGATTCAATAGTCAATGCA 179338 46 100.0 30 .............................................. AGAACTTGTTCTTGCAGTGTACCTGTCGGA 179262 46 100.0 30 .............................................. TTTGCGACCCTTTGTAGGTTTCATTATAGT 179186 46 100.0 30 .............................................. AGTTCAGTACTACGATGCCACGAAATCGGA 179110 46 100.0 30 .............................................. CCTGATGCTAACGTGTAACCGCTAGGGAAA 179034 46 100.0 30 .............................................. TCTTTGTTTTTGCAAGCATACCGTTAGCAA 178958 46 100.0 30 .............................................. ATGAAATGGTTCCATTTATAAAGTTTGCCG 178882 46 100.0 30 .............................................. CTTTCATCAAATCATACGATATAAAAAGTT 178806 46 100.0 30 .............................................. TAAATCTTGTTTTAGCTTAATCGCGTTGCT 178730 46 100.0 30 .............................................. TTAGTCCAGTTTCAGAACTTACCGCGCGGA 178654 46 100.0 30 .............................................. AAAGAAGTTGTCGGCAAAGCTCGCCCTTTA 178578 46 100.0 30 .............................................. CGCCGAATCCCTTTTGAGTTAGGTGGTAAT 178502 46 100.0 30 .............................................. TTCTGCCTGGATTTGTATTTCGCTTGGTAA 178426 46 100.0 30 .............................................. ATTTAAGAAATGGCAAAGATAACTAAAATG 178350 46 100.0 30 .............................................. GATGAACAGCTACGAAAGCATAACAGATTT 178274 46 100.0 30 .............................................. TACCAGGTTGAGTACCGCTTTTTCGTCTAT 178198 46 100.0 30 .............................................. CTATTCACTGGCTTTCAGAAAAACGGCGTC 178122 46 100.0 30 .............................................. AAAATTCCGCAGTATTGCAAGAATCAAGTA 178046 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 33 46 99.9 30 GTTGTGATTTGCTTTCATTCTTTGAACAACTGATATTTACCACAGC # Left flank : CTGATCGGAAAAAGCTTTGAGTGCCGGAATCAGGGTAAGCAGTGCGTCAAAACTGTCTTTGCTCCATAACAATAGCTGGCTGTCCTCTAATGCATCGATGTTGTAATCAGACGGATTGCGGTTAGCGTAACTTTCTCCGTCGGTTGTCCAGGTTAATTCCGGCGAAAACTGCATGAGGTGCTCGCTTCCGTCCGATCCGATGCGGTAAGTGCGTAAAAATCCTTTGGTAATAAACATCTTGTAACGGCATACCTCGCCCGCGTTAAGAAGAAGCTCTTTCTTTCGAACTTTTCTTTGAATAGCAGCAGCACCTATTCGCCGGATTTCCTCGTCCGTGAAGGAGGTGGATTGGGCTTTGATGTATTTTTCAAAAATGGGTAGCATCAGTAGCTCAAAAGTAGTGAATATGGTGAGGAGATGAAAGGTGCGTCTAGGCGGAATACCGTCTTTTCAAAACTGCTTACCATAACTAAGACACTTTCAGCACAGCGGTTTTCCCA # Right flank : ATACCCTGGTTTAAGGATTTGAATATCAGTTGTTTGAAGAAAAAAACAGAATTTAAAAATCCGGTCGTATGAACGGCCGGATGTAATTCTGAATGGCGATTTTAAATTTCAGATTGTAATGCGTTTTAGAAAAGTTCCAGTTGTTGCGGCGTATCGGGTAATTTTTTCTCATCCTTGCCATAAAAAAGTTCAATCATGCCGAATTGCTTATCCGTCACTGTCAGGATGCCTACGTGACCTTTAGGCGGAAGCGCTTTCTTTACACGCTTGATATGAACATCGGCATTCTCCCGGCTGCTGCAATGCCGCAGGTAGATGGAGAACTGGAACATCGCAAAGCCGTCTTCCATCAGGTCCTTCCGGAATTTAGTGTACAGCTTCCGGTCCTTTTTGGTTTCGGTCGGCAGGTCGAAAAATACTAGTATCCACAAAATCCTGTATTCATTTAAGCGCATCGTCAGAATGGGAGTTCATCATCGTCCGCCAGGTACTCCGTCTCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTCTTTGAACAACTGATATTTACCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.22%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCATCCTTTGAACTACTGATATTTACAACAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.70,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //