Array 1 28343-25005 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKZW01000002.1 Klebsiella pneumoniae strain EuSCAPE_ES063, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 28342 29 100.0 32 ............................. ACAGAAACCAGCAGCGCTATAACCTTGAGGGG 28281 29 100.0 32 ............................. ACTGCGATTCGTTGACGATTATTCCTCCGCGA 28220 29 100.0 32 ............................. ACCCAGCAGCGTCTGCAGGACTTCGCGGGGAT 28159 29 100.0 32 ............................. CTCATAGGTATAGGCTGAGTTAACTGAACCGG 28098 29 100.0 32 ............................. GCTCGCAAGTTACATCGCTGCTGTGAGTGTCA 28037 29 100.0 32 ............................. GTTTCGCACTCGCCGTTCTGACTGCTGCGCCA 27976 29 100.0 32 ............................. GATCTCGATGAGGAGATTCAGATTCAGTGTAT 27915 29 100.0 32 ............................. TCATAGCCGCCGCCCATGCAACGCGCTATCAG 27854 29 100.0 32 ............................. CTGGCGATCATTAACGAGCCGCTGGGTAAAGA 27793 29 100.0 32 ............................. CCGCTAAAAGTACCTGTTGTCCCACCAATACC 27732 29 100.0 32 ............................. CCCGCGGGGATCTGATGATCCTGGGCGGAAAC 27671 29 100.0 32 ............................. GTGTGAGAGCAACCACAGCAATGACGAAGAGT 27610 29 100.0 50 ............................. CTGAACGGGGATAAACCGTATCGCATCCGTGAACTGCCGGTGCTCCAGAA 27531 29 100.0 32 ............................. AGCGCCGCTGGTGATTCTGGCGAAGAGGACTT 27470 29 100.0 32 ............................. GGTTTAACCGACATTCTCTCGCCCGCAGTAAT 27409 29 100.0 32 ............................. AAACGATAAGGCGTCGGTTACGTGAGTTTTGA 27348 29 100.0 32 ............................. CGCCGATCGTGTTCAGTAGCAACGGGTATGCC 27287 29 96.6 32 ............................T TCGCTGTATTCACTCACCAGCTGGCTGCGCGG 27226 29 100.0 32 ............................. GATCTCGATGAGGAGATTCAGATTCAGTGTAT 27165 29 100.0 32 ............................. GCTCAAATCACAGACGAACGTTTGGCAAAAAT 27104 29 100.0 32 ............................. CCTACAGTCACAGCAGGCGGCCAGCATGTGGG 27043 29 100.0 32 ............................. TTTTACATCTCCCCCAGGAGACCTTGGGGGAA 26982 29 100.0 32 ............................. GCGAGCTAATGCCATACCGCTGTTGTAACGAT 26921 29 100.0 32 ............................. GACCAGAAAGCGTGGGCGCTTTTCCGCTCGTT 26860 29 100.0 32 ............................. CCCGCCGGGATGGATTTAACCCCGCTCTTTTC 26799 29 96.6 32 ............................A CACTGGCAACCCACACAGAGCGGGTGCCTCCC 26738 29 100.0 32 ............................. GCTGATTTAATTGAGTCGTGGACGCCCCCTGA 26677 29 100.0 32 ............................. TTGGCGGCCTGCCGGCGGTTTACGCGGCGGGC 26616 29 100.0 32 ............................. GTGTATAGCGAAGTGAAGCAAAAAATGGTTAA 26555 29 100.0 32 ............................. CAATCGTAATTTCCAGTCAAGGCGGCTTTACG 26494 29 100.0 32 ............................. CGGGGATCGAGGATTTCCGTTTTCACGACCTC 26433 29 100.0 32 ............................. GCTACGGTCAGCGCAGGTGATGGCTACCCAGT 26372 29 100.0 32 ............................. TGGAGTCTGGTGCATTTGACGGCGCGGTATTA 26311 29 100.0 32 ............................. ATCTTCGTCATTGCGATACATACTCACTGCCT 26250 29 100.0 32 ............................. CCAGCGGATATGCTCCACGACATGATCAGCGC 26189 29 100.0 32 ............................. TAAAATCGATACTTCATTCGCTGCCAATAAGC 26128 29 100.0 32 ............................. CGTCGCTGAATCTCCCAGCCCCAGGTTCGCGC 26067 29 100.0 32 ............................. CCATCAATTTCCGACGTTTTATAACGTCCCTG 26006 29 100.0 32 ............................. ACCAGATAGAGATCCACATTGAGATTAACCCG 25945 29 96.6 32 ............................A CGCGGAACCGTAATTCATGCATAAAATTTTTC 25884 29 100.0 32 ............................. GGAATGGGAGACTGGCGTTTCATGATTAGTGA 25823 29 100.0 32 ............................. CGCCCACGCTTTCTGGTCCATCACAGCGATAT 25762 29 100.0 32 ............................. TTGCGCTCGGCGGCGCTGTTTCAACCGCCAGA 25701 29 100.0 32 ............................. GCGGCGGGTTTATGGGGAAAGACTGGGACAGT 25640 29 100.0 32 ............................. AACTCTGGCCCCTGGCGCGGCGCCAGGATATC 25579 29 100.0 32 ............................. CAGCCAGCCATCTGCCGTTGAGTCGATGCTGG 25518 29 100.0 32 ............................. GGCAGTCCAGTTATGGTTCGGGTCCGCTGTGG 25457 29 100.0 32 ............................. GGGCTCAAGGCCGTTATTTTCTACGTGTTGAA 25396 29 100.0 32 ............................. GATGCCAAAAAACTGTTTGCGTTTGCGTGGGC 25335 29 100.0 32 ............................. CCGCAAGCCGTATCAACGAATTACTGCTCGAA 25274 29 100.0 32 ............................. CCCCCCACTCGGTACGCATCATGATATTGAGC 25213 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 25152 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 25091 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 25033 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================================== ================== 55 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCTGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //