Array 1 3389958-3395572 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNCK01000001.1 Halomonas zincidurans B6 H_zincidurans_B6_S1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3389958 28 100.0 32 ............................ ACCTGGGCGAACGAGTTTCGCCTGATCCGCCA 3390018 28 100.0 32 ............................ AGCGCCACTTGGATAGCCGAGACATGGACCTG 3390078 28 100.0 32 ............................ ACCGGCGTGGCGGCGAGTACCTCGACGGACAC 3390138 28 100.0 32 ............................ TGGCACCCCGGCACCGAAAAGTGGCGGGCAAG 3390198 28 100.0 32 ............................ TTGCCTACGCCATCGCCAGCGCCTTTAAGTGC 3390258 28 100.0 32 ............................ CAGCTCGATGCGCCCGTATTTCGTCGGGTCGT 3390318 28 100.0 32 ............................ TGGATCAACGGCAATGGCTATACAAAAAAGCC 3390378 28 100.0 32 ............................ GAGGATATTTCTCGACTCACGCTCCGGAAGAG 3390438 28 100.0 32 ............................ GAAACAGCAACTCCCGGTTGAGCGACGAAACC 3390498 28 100.0 33 ............................ TGAGAGCGTGCTGTCGATGAACAGGGGCTGTAC 3390559 28 100.0 32 ............................ AATCGATGCACGAGTTTGGGCTGCTTCTTGCC 3390619 28 100.0 32 ............................ ACGCCTGCCCCGCCTCACCCTCGGCGTAGGGT 3390679 28 100.0 32 ............................ AAGGGATCCCCGATTCGCCGAACACACCGGAA 3390739 28 100.0 32 ............................ TTGCGCGAGAACATGTCGACCAGCGAGCTACA 3390799 28 100.0 32 ............................ AACGAGCGTGTCAAGGCGGATACAGCCAAGTT 3390859 28 100.0 32 ............................ TTGCGCGTCTGCTTAATACGTGCTGTGAGTAT 3390919 28 100.0 32 ............................ AGCCGAAAAACATGGACGACCCGACCGGCAGC 3390979 28 100.0 32 ............................ AGAACAGCATCAGCGACCTGATGGGCGAGCCC 3391039 28 100.0 32 ............................ GGTACCGCTATCGCCTTTGCGCGTGACTGCTG 3391099 28 100.0 32 ............................ GCCGACTTCGGTCGTTTCCATACTTCGATGCC 3391159 28 100.0 33 ............................ CTAGAAACTCAGGCCGCACAGTTCATGGATCTG 3391220 28 100.0 32 ............................ AGAAACTGAGATGCGGGACCGAATTGGATCGT 3391280 28 100.0 32 ............................ GAAACCCTGCAGATAGAACGTCGCACATTGGT 3391340 28 100.0 32 ............................ GCGAACGTGTATTGCCTGTCCTGCGCAAGGAA 3391400 28 100.0 32 ............................ TAACCGGTAGTAGACCTTCTGAGTGCCCAGTC 3391460 28 100.0 32 ............................ TGTACCGCCCGTTACCAGCCACGACAGATAGC 3391520 28 100.0 32 ............................ TTGACAGAAATCGGCTACAGTGATCACACCAA 3391580 28 100.0 32 ............................ TGGACGAGGAGTCGCGCCGGGTGATGAGTGTC 3391640 28 100.0 32 ............................ ACGCGAGCCGCAGAGTCGCGGAGCAACAGAGC 3391700 28 100.0 32 ............................ AGGCACGACGGACGGAACTTATCCGTCGACTT 3391760 28 100.0 32 ............................ CAGCGCGAGAAGCGCCAACAGCGCCTGGCCGG 3391820 28 100.0 32 ............................ TGAAACAGGATGCCCGGCGGCACGGTCTTGCC 3391880 28 100.0 32 ............................ AAGAAGGGCCGGCGTTTCGAAATCATCGTCGC 3391940 28 100.0 33 ............................ AACGTCAGCGCCGCAGAAGCTCGTCGCCTCGCT 3392001 28 100.0 32 ............................ TTGACCGAATCCGACGACGCCGCCGAAGCTGC 3392061 28 100.0 32 ............................ GGCATAAGACGCCGCGGCCTCGATGGTCGGGT 3392121 28 100.0 32 ............................ ATCACCTTCTACGGCGTGCCCGAGGCCAGCAC 3392181 28 100.0 32 ............................ TGGCATGGGCGAGCGCCAGGCGTGCATCGTTG 3392241 28 100.0 32 ............................ ACCGCCGAGCAGCTCGAAACCCTGCGCTATCT 3392301 28 100.0 32 ............................ TCAGGATGCCGGTACCGTTCCGGCCATCTCCT 3392361 28 100.0 32 ............................ TCCTGGCGGGCGCGCTCGGCGTCCTCGGCGCG 3392421 28 100.0 32 ............................ GCGCAACGATGGCCGATTTCTTCGCTTCACCG 3392481 28 100.0 32 ............................ AATCACGATTGCGCTGGTGATTGTGGAAACCA 3392541 28 100.0 32 ............................ CCCTTACTTCATTAGATAGACGGCCAGCAGCA 3392601 28 100.0 32 ............................ TGGCCGTGGGCATCGCTGAATCGTGCCGCTTT 3392661 28 100.0 33 ............................ ACCATTCGCAGGTAGCGAGGCGTGACGCCCAGT 3392722 28 100.0 32 ............................ TGCTCAAGGTGCGCCCCTATTGGCGCTATCTG 3392782 28 100.0 32 ............................ TGGCTACCCTGAATACCCACGTTGCCCAGCAT 3392842 28 96.4 32 ...A........................ TCACCCTGCTTTCGCTCAACCCGGCCGGGCTG 3392902 28 100.0 32 ............................ GAGATGGGCCGCGTCGGCGATGTACTGACGGC 3392962 28 100.0 33 ............................ CTGGTGCAAGCCGATGGCCTGGGCCGCGACAGC 3393023 28 100.0 32 ............................ ACTGGACCCCCGCCGACTGCGCGGATTTCACA 3393083 28 100.0 32 ............................ AACGCGGCATCTAGTCACATAAAAGCGATCTA 3393143 28 100.0 32 ............................ TACCTGATCTACAAGAACTGGGGCGCGATCAG 3393203 28 100.0 32 ............................ AGCATCCGTGACCGGTACCGCCGTCGCCTTTG 3393263 28 100.0 32 ............................ GGCACGCTGAAAGACACCCTCACCACCATCGG 3393323 28 100.0 32 ............................ GCGAACAGGGCGACTCACCACCGTCTACGAGC 3393383 28 100.0 32 ............................ AGTAGCCGGACGCGGCCGCTGTCTGCTTGGGA 3393443 28 100.0 32 ............................ GTGTCTGACACCTGCATGACGAAGCGGATCGT 3393503 28 100.0 32 ............................ ACGACGACCGAGCTAGGCTTCGTCGAGAAAGC 3393563 28 100.0 32 ............................ AGTACTCCCGGGCGATGAAGCGGCACAGCGCC 3393623 28 100.0 32 ............................ CGGTTGCGTTCCCGCGCTCCCGTTCCCCTCGG 3393683 28 100.0 33 ............................ TGAGTTAATCTCAGAGTACTAAGACATCTACCA 3393744 28 100.0 32 ............................ ATGAGCCGCATGAACAAGCAGTCTTCGCATAG 3393804 28 100.0 32 ............................ TAGTCGGTCTCGCCCCGCACCCGCTTCGAGAC 3393864 28 100.0 32 ............................ AGGTCGAGACGATCATCGAGGATCCGGCCACC 3393924 28 100.0 32 ............................ TCACCGCGCCCGACGTCACCGTCGACAGCCCC 3393984 28 100.0 32 ............................ AAGAGGCGGCGGGGCGTGCCGACACCCTGGCA 3394044 28 100.0 32 ............................ TATCCCGATGGGCACGCTCTCCACCCTTGCTG 3394104 28 100.0 32 ............................ CAGCGAACCGATGCCGGCGAGACCCTGCCGAC 3394164 28 100.0 32 ............................ ATGGAGCGCCAGAACGATCAGCAGCAGTTCAC 3394224 28 100.0 32 ............................ AAATAGCACGAGCATTGCGATTTTGGACGCTC 3394284 28 100.0 32 ............................ TGTAACGCTTGGTGCTGCATTGCAACCATCCG 3394344 28 100.0 32 ............................ TGCTACGCGACCGCCGAATCACTCGATCCCGA 3394404 28 100.0 32 ............................ TGGTATTGCGTAGTCCCGGGATCGGTACCCAC 3394464 28 100.0 32 ............................ GTCGCGCTGGCCCTGTTGGGGCGGCTGTTGGC 3394524 28 100.0 32 ............................ TGGCCATTGTGCCGGGGCGCTTTCGTTTGCAG 3394584 28 100.0 32 ............................ TCGCCATTGGCGAGCTCAACGGTCCGTGACCC 3394644 28 100.0 32 ............................ TACAGCGAGCGCAACGAGATCAAGGGCGACTT 3394704 28 100.0 32 ............................ AGATCCGTGAGCAGGCTGAGCAGAAAGCTCGC 3394764 28 100.0 32 ............................ TGATGGACAACATTAAGGCAAAGGTGAAGTAA 3394824 28 100.0 32 ............................ TGCTGCAGCGCTGCCAGGGCCCCGCTCTCCTT 3394884 28 100.0 33 ............................ TTGACACGCTCGTTGGTGCTTTCCAGGCATTCT 3394945 28 100.0 32 ............................ CTGAGCGTCTGCTTAATACGTGCTGCGAGTAT 3395005 28 100.0 32 ............................ ACGTCACGCCTCGAGTCACTATTGCAAGGCGC 3395065 28 100.0 32 ............................ AACCAGCTGCACGCCAACGCCAGAGACGGCGT 3395125 28 100.0 32 ............................ GCCAGCGCACAACGCCAGTTATCCACAACCTC 3395185 28 100.0 32 ............................ TTCGCAAAAAGATCAACGACACGCTGGGCACG 3395245 28 100.0 32 ............................ TTGACGACCCGGTCGTACCAATCCAGGTCGTC 3395305 28 100.0 32 ............................ TGATCTACGACGGCCGCATTCGCGAGGCCATC 3395365 28 100.0 32 ............................ ACATTGCAAAGCTCATGCGCTGCCGGTTCTTG 3395425 28 100.0 32 ............................ TCACCCCGTCGTCGTCATGCGCGAGCCGCCGC 3395485 28 100.0 32 ............................ ACCAAGAAGCTCCGCACGCTGTTTAGGTGGCA 3395545 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 94 28 100.0 32 GTTCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CCGTCTTGAACAGCTCATGGCGCTCCCGTGGCTGGCGGGGATGCGTGACCATGTCGAGTTGGCGGACATTGCGCCGGTTCCGGCGGAAGTGAGTCATCGCCGCGTGGTACGCCGGCAGTTCAATACGGGCGGGCCGAGTCGGGTCAAGCGTTACGCGCGTCGGCACGACATCAGCGATGAAGAAGCGCGCCAATGCATGTCGGCATCTGCTGAGCGCAAGATCTCATTGCCGTTCGTACAAGTGAACAGCCGATCCAGTGGCCAGCGTTTTGCGCTGTTTATCGAGCACGGGCAACTGCAAGCCACACGGGTAGCAGGGCGCTTCAATCACTACGGGCTGAGCCGTGAAGCGACAGTGCCATGGTTTTGACCCTTTTTGGGGAGGCTCTATAGCACCCTTTTTAAATCAACAACCTAGCGCCACCTCCTGTGTAAGGGTGTGGCGCTTTCTTTAGGTGAATGCTCTTTAACAATTAGGCATTTAGCTGTGATAAGCTCTA # Right flank : ACTAAAGGACGGGGTTTTTCGCGTTGCGGGGTGGACGGTTTGCTCCTTTTGCAGTATGTAGTGGTGGACTCTTCATTCGGTGATACCGCCCTGAGCGGATTGGTGGCCGGCCGTGACTATCCACGCACGTACCGTGAGTTCGTTGAGATGTATCCTGACGGTGCGGCCTGCGCTGCGTGGTTGGGCCAATTGCGTTGGCCCAGTGGCTTTGTCTGCCCGGCGTGCGGGACTGCTGCGTCGCCATGGCAGCACTCGTGGGGTGCCTCGTGTGCTCGTCCTGCCGCCATCAGGGAACAGTGACCGCTGGAACCCTCCTGGACAAGACGCGGACGCCGCTGACCACTTGGTTTGAGGCCAGCCGCAGCCTCGTATTCCGTCGGCTGCTCGAACAAGCCGTTGTCACCGGGCCTGTGACGCAAGCGCAGGTGACCCATGGCTATGACTGGTGACCACAAGATGTGGGGGGTGGAGGAGCAAACCGCCCACCCCGCTTGGGCAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //