Array 1 61438-60432 **** Predicted by CRISPRDetect 2.4 *** >NZ_QBDY01000031.1 Klebsiella grimontii strain WCHKG020121 31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 61437 29 100.0 32 ............................. TCAGTAGTGCGATAGCGCCACGCTACCGGCTC 61376 29 96.6 34 ............................T GATAGCTCCAATATTCTCTGTCTGCGCGGCAAGC 61313 29 100.0 32 ............................. GCCGCAATGGACAGTGAGCCGGTGGCAGAGAT 61252 29 100.0 32 ............................. TAACAGCCGGAGATTTTATACAGTCCACTTTC 61191 29 100.0 32 ............................. ACTGCCGTCGGTCATATATGCGGTGACATATA 61130 29 100.0 32 ............................. GTTCCTGCCGTCTGTAGGCAGCGCTAAACTCT 61069 29 100.0 32 ............................. TTACCTTTGTCGCTTTTACAGAGGCAATGGAC 61008 29 100.0 32 ............................. CCGGTATCGCATCGTTTTGCTTTTACAACCTG 60947 29 100.0 32 ............................. GCCGCTGGCAGGTGATGCGGCGCGTTAGCGAT 60886 29 100.0 32 ............................. GGATGCCTGCCGCGCCGCCATGCTGCAGGAAC 60825 29 100.0 32 ............................. TACAACATGCTGGCGCAGCGGCATACCATCAG 60764 29 100.0 32 ............................. CAACCTGTGTGCGCATAGCCTTGATCGCTTTC 60703 29 100.0 32 ............................. CGTAACGCAAATTCAGGCAGATTATTTAACCC 60642 28 96.6 32 .............-............... ATTGATCGCGCTTTCTCGCGCATCTCAGAAGA 60582 29 96.6 32 ...............A............. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 60521 29 96.6 32 .............T............... AACAGCCCACAAAACTTTTTGCATGGGGCCGC 60460 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================== ================== 17 29 98.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGCGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : CAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCCTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTAG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 163318-164384 **** Predicted by CRISPRDetect 2.4 *** >NZ_QBDY01000008.1 Klebsiella grimontii strain WCHKG020121 8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 163318 29 100.0 32 ............................. CTGCCACCCATTCGTTAACCAGCCAGACACCC 163379 29 100.0 32 ............................. ACAACGCACCGCGGCAGAACAGCGAAAAGTTA 163440 29 100.0 32 ............................. ACCATTCTCATCATTCACGGCACGCAGTTAGT 163501 29 100.0 32 ............................. CCGTTGATTTTTTCCGACGCTGGCTCAGTCTC 163562 29 100.0 32 ............................. CGCTTCCGTTTCCTGAGCATATAGGTCGCCAT 163623 29 100.0 32 ............................. CGACCGCCAGCGGCGTTGTTAAACACGCCTGG 163684 29 100.0 32 ............................. GTGATTCCAGCGTTAACCCGCAACAGTTCATG 163745 29 100.0 32 ............................. CCTATAACCGACGAAGGCAAGCGCCGCGCACG 163806 29 100.0 32 ............................. CCAGTTAGCCGCACTCTTTAATTGATCTGCGC 163867 29 100.0 32 ............................. TAGCCCCTTCGAGTGACGGGTATTCCTGACCG 163928 29 100.0 32 ............................. CGTTGGATCGACGATGACTCCCCGTTAAAAAT 163989 29 100.0 32 ............................. TGAAAGAATTAACGCCGGGAGAAATGACGGCA 164050 29 100.0 32 ............................. GGTACTGCCCTGCACTGTCTGCTGCTGGAGCC 164111 29 100.0 32 ............................. ACAACGCAGCCAACTGAGATTCAGAAGGCAGC 164172 29 100.0 32 ............................. CGATCCACTTTCTCACCGCAGAGCAAAAAGAA 164233 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 164294 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTCTGCGAAT 164356 29 82.8 0 .....G......TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 18 29 98.9 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTAAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GGTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //