Array 1 755535-757152 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054510.1 Flavobacterium columnare strain F9R75 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 755535 36 97.2 30 ......A............................. ATTTTAAAAAGACAGATTAAATCGGCTGGG T,TATAA [755536,755544] 755607 36 100.0 30 .................................... TGACTAAAAAAGCCATTGCAAGCGCTACAG 755673 36 100.0 29 .................................... CGATTTGGTTACACGAAGGTATTTTCGAG 755738 36 100.0 29 .................................... TTTTAAATTTGGCGGTTGACCATAGATCG 755803 36 100.0 29 .................................... ATTGTAAGGTATTTCAAGTGGACACCGCA 755868 36 100.0 30 .................................... ATTATATTTGTGTTACATGGTGTAGTTAAA 755934 36 100.0 30 .................................... TTCAGAAGGAATTTAGAAGCTTCTGTTCCT 756000 36 100.0 30 .................................... TATAAAGCAAAACTAATTGATTGATAAACT 756066 36 100.0 30 .................................... GAAAGCTATGCTGCCATATAAACAGGATGG 756132 36 100.0 30 .................................... TTTGAAATAATTTTTAATTTTATAACATTA 756198 36 100.0 30 .................................... TCTACAAATACCTGAATTAACTCTAAACTG 756264 36 100.0 30 .................................... AAAATAAGAAGAGATAGTAACAGAAACAAA 756330 36 100.0 30 .................................... GCATTTCAAGATAGTAGAGAATTTAATCAG 756396 36 100.0 30 .................................... AACTTGCAAACAATACCAGACTATCAAAAA 756462 36 100.0 29 .................................... CTTATTTTTCAAGTCCGTCGGGGTCGATG 756527 36 100.0 30 .................................... GATGCTGAAGAAAAACACAAAAAAGAACAA 756593 36 100.0 30 .................................... TTATAACCTTTTTACTATTTCATTTAGCTT 756659 36 100.0 30 .................................... AGAATTTCGGTTGGATACTCAAAGCAATTG 756725 36 100.0 29 .................................... GGTTATAAAATTGATGAAGAAATAGGCTA 756790 36 100.0 30 .................................... CGACCGCAAACATACGATAGTTACTTTATA 756856 36 100.0 29 .................................... GTTATTCAAGATAATTGCAACATAGGGTA 756921 36 100.0 29 .................................... TACTCATTCTCACTAAAAGAAATAGCTTA 756986 36 100.0 30 .................................... ATGTTCTATCGGCGTAAAATAAGTTAGCAG 757052 36 100.0 29 .................................... TTAATTAAATCACAAAAAATGACAAGAGA 757117 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.9 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : AAATGCTTGCCGAATTTAAAAAACGATTAAATGTATAATTATGATTTAAGCGAACAAGCTAAAATAGATTTGTTGCGTATTTATGAATATGGAATTGGTCAGTTTGGTCTAGACCAAGCTGATAAATATTTTGACATGATGCACGATTGTTTTAATAAAATTGCTAAAAATCCATATTTATTCCCTTTGGAATCAAATATTAAGTCAAATTATTACAAATGTGTTTGCGGAATTGACACCATCTATTATAAAGTTGTTACAAATGGAGTTATCATTACAACAATAGTTGGAAGGCAGGATTTTGAAATTCAAAATTTAGTTCATTGACATACACTATCAAATCGCAAATAACCAAACCTCATACTGATTGGTTTGATTAAAGATTAGAAACCGAGGGACGAGGTTCAACGAAGTCAAAACACGATATTATTTGGTTAAAAATTACGATTGTAATTTCAGTTGTGGTTTACAAACACCAAGTCAATATTTGTTATAGGTGT # Right flank : TAGCTAACAGCTTAGTTCTTAAATATCAAAGCATTAAGCCGAAATATCGTTAAAAAAAATGCTTCTTTTTTGGCACGTTATACCAAGATTGAAGCATTTTTTTATTTCTAAAACAGTTCCAGTTGGGTGGGTTGTGGTGCTTTAGGGGTTTCTACTTTACCCCAAAAGTTTTGTATGTTCCCAAATTGCTTGTCTGTAATTCGTAACATACTTACTTTTCCTGAAGGAGGCAGGAGTTTGTGTACACGTTTTTCATGTACATCGGCACTTTCGCTACTGGCACAATGCCGTATATATACCGAGTATTGCATCATACTAAAACCATCTTTCAAAAGTTGGTTCCGAAATCCAGAAGCATTTTTTCGGTCTTTCTTAGTCTCAGTAGGCAAATCAAAAAACACAAACAACCACATAATTCGATACCCGTTTAAATCCATAATTTTGGGTATTTTATCTTTTTACGATCGCCCGAAAAACACTGTTGTAAGGAACTTGCCGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 1284409-1285493 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054510.1 Flavobacterium columnare strain F9R75 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1284409 36 100.0 30 .................................... TATTCTAATGGATCAATTAAAAAAGCAAGA 1284475 36 100.0 30 .................................... TCGAGAGGTGTTAATGAAACGAACATAGTT 1284541 36 100.0 29 .................................... AATTACTGCTAAATGATACAATGTGTTTG 1284606 36 100.0 30 .................................... GGTAAATAATTTATCTCTAGATTATAGTAT 1284672 36 100.0 30 .................................... GCTATGCTACTTATACAGATGCACAACATC 1284738 36 100.0 30 .................................... TGGTTTTCCGTAATGATATAAATAGAATTT 1284804 36 100.0 29 .................................... CGGTTTGTCTGCATTTGAAACTCCAGCAC 1284869 36 100.0 29 .................................... TCGCGGGAAAAGTTGAAAAAGGATTAAAC 1284934 36 100.0 29 .................................... GTTTTAACCAAACATTTGCCAGGGCATAA 1284999 36 100.0 30 .................................... AGTGCGGAAAGCCCGGCTTTAGAACGCCCA 1285065 36 100.0 30 .................................... GGAGACATCCATCCTCTATCTAAACGTAAA 1285131 36 100.0 30 .................................... AATGAAGAAGTTTATTTAGAAAACCAAAGA 1285197 36 100.0 29 .................................... CAATCTCAAAGTATAATTGATAAATAGGC 1285262 36 100.0 29 .................................... TTCTAGCTTTGGCCACCTCATCTTTTGAA 1285327 36 100.0 29 .................................... TTGTCGAACTTTTCTTTTTTATAATGCAA 1285392 36 100.0 30 .................................... CATATTCTTCTTCAAAGTGATGTTTGTAAT 1285458 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 100.0 30 GTTGGGAAAGCCCTTATTTTGAAGGGTATCTACAAC # Left flank : GAGTACGCAAATACATCCAGCCGATTTTGAAAGAGAGGGCAATCCAAATTTTAAAAAATATTTAGCCCATTCTATTTTAGAAAACGAAGATGATCTTGATAAACTGCCTGAAAAAGCAGAAGCAATGAGGGAACTGGATGAAACAATTACTAATCCAATCATTAAAAAAGCGATTGTGTTAATTATCATTCGCAACAAAATGGCGCACAATCAATATCCACCTAAATTTATTTACGATTTAGCGAATCGTTTTGTCCCAAAAAAAGAAGAAGAATACTTTGCGACCTATTTCAACCGAGTTTTTGAAACCATAACAAAAGAATTATGGGAAAACAAAGAGAAAAAAGATAAAACACAGGTCTAAATACAATTGCTCTTTGACATTTTAAATTAGGATTAAAAAAATGACTACATTTGCAGTGATTAAAACAAAAAAAGTTCATTTTTTATAAAGAAAAATTGTAGTAATCCCTTACTATGAGAGGCTTACCAGCGTTTAG # Right flank : CACCCTTAGAATCTTCACCGTACCAATACCTGTTAGCCCTTATTTTGAAGGAGGGACGAGCGTTAAAAAATAGTCCAATGGACTATTTTAGCGAAGTAGCCAGGAGGTGCGTGGGCGTTTAAAACCGAATTCAATTTTTTTGAAGGAGGGACGAGCGTTAAGGAAGCTGTCCAAAAAGTACTAATTCAACATCCAGTTTGTCACTCCTACGTAAGGAGGAGTCTCATAATCAATAGTATGTAATTTCTTCCTTTGGTCAAAATCACAAGATTGCGAACTTTTTGGACAGTCTCTAGCAAAATAGCGAGCAGGCGTTTGAAACCAAATTCAATTATTTAAAAAATAGATAAACCATAATTCTTATTCATAGAAATACCTCTTTTTTTAAAATAACAAAAACAAACCTATAACACAATCAAGTAAATATGATCTGTATACTACCTCCTAAACTTCCTTATAATTTAACCTCAACACCTAAGATATTTTTGTAAATTTGAATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGGAAAGCCCTTATTTTGAAGGGTATCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //