Array 1 125890-124580 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCLZ01000032.1 Escherichia coli strain EW239 EW_239_000000000-B8CVN_L001_R1__paired__contig_32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 125889 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 125828 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 125767 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 125706 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 125645 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 125584 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 125523 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 125462 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 125401 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 125340 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 125279 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 125218 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 125157 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 125096 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 125035 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 124974 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 124913 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 124852 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 124791 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 124730 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 124669 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 124608 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //