Array 1 250984-248586 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB905379.1 Halomicrobium katesii DSM 19301 HalkaDRAFT_scaffold2.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 250983 30 100.0 34 .............................. AGGACGGCTCGTATGGCTCCGGCGGCGAGGACGA 250919 30 100.0 36 .............................. TGTTGGATCGAGTACGTCTCCGCGTCGCCGTCGGTG 250853 30 100.0 36 .............................. GAACTGACGCGGGCCGAGTTTCGGGCGATCGCCTAC 250787 30 100.0 35 .............................. CCCGGCCCGTCGATCCTGTTCGATCTGGACCACGA 250722 30 100.0 37 .............................. AGTTCCTCGGCGTCCTGTCCGCTTGCGTCGTAATCGC 250655 30 100.0 36 .............................. CACCATTGCGATCTGTCAGAGGGGTGGGTCGACCAA 250589 30 100.0 35 .............................. GACAGATATCGGAGCCAGTGGACGACCATCGACTC 250524 30 100.0 36 .............................. TGGCAACCGGGAGTACTTCCAGCGGGCGATGGCCGG 250458 30 100.0 35 .............................. TTATGGCACCGCTCACACACTCCGACTAAGTTCTC 250393 30 100.0 35 .............................. ACGGCGGCAAGTCGGTGGATGAGTCGGCCCTCAAG 250328 30 100.0 36 .............................. TCGAAACCGAGGGCGGTAAGGACTCCTTCGAGGACG 250262 30 100.0 39 .............................. AGGCATCGTGACTCCCTCCGTTACCCAAGGGTGTCCGGC 250193 30 100.0 36 .............................. GACGCGCTACGTCGTCCTAGCTGTTGCTTTGACTAT 250127 30 100.0 37 .............................. GCTCTAAGTTCGCGCTGTCGAGTCCGCCGCTGCGCGT 250060 30 100.0 36 .............................. AACTGGTATTCCCGTCGAAGGGTCGGCACTCGGCTT 249994 30 100.0 36 .............................. CGGTACCAATAACGGTGGACGAAACGAATCCGAGGA 249928 30 100.0 36 .............................. AATACCCTCTGCCTGAGATGTCGTCTCTGAGCCGCT 249862 30 100.0 34 .............................. TACACCGGTAATCCCGCTAATGCGTGACGAACGG 249798 30 100.0 34 .............................. GACAGCCGACGCCGTCGGGTTTGCGGTCAAGCTC 249734 30 100.0 37 .............................. CATGTCAGCGTGCCGGACGAGCGCGATCAGCTCGGAC 249667 30 100.0 36 .............................. AGACCGGAGATGTCGGAGCGTTGGTCCTGCTGGCCG 249601 30 100.0 37 .............................. GCGCTCGCCGTCTTTGTCGCGACTTCCGATCCGTCGA 249534 30 100.0 35 .............................. GTGGTCGTCTGGTCCTAGCATTGGGTACACTCAAC 249469 30 100.0 35 .............................. TCGACGAGATCCCGATGCACGAGGAGGTTGCCATC 249404 30 100.0 35 .............................. CGCGCTTCGCGTACGGGCCGTGTTCGGCTTCGTCC 249339 30 100.0 36 .............................. ACACCGAGTGCTGGCGAGACCTGAGCAACGACTGGA 249273 30 100.0 36 .............................. AAGATCCTGATCCGCCACCTCATCGCGTAGATGCAC 249207 30 100.0 36 .............................. AAGTCCAAGAACGGACTTGTCCTTTTCCCGATCTTC 249141 30 100.0 37 .............................. CGGTCGTGGCCCGACTCGGCACAGACCGAGAGGCTGG 249074 30 100.0 37 .............................. CTCAACATCGCCGGGATGTGCCGTTGCGATTCGTTCA 249007 30 100.0 37 .............................. GCCGTCGTCTCGATACTCTCTAAACCGAGAATCGACC 248940 30 100.0 36 .............................. TGACGAGAGTGTGCCCTCGGTCGCTGGCGAAACCTC 248874 30 100.0 35 .............................. GCATCCGACATGCCAGACAGCCATGTCCTCCCCCG 248809 30 100.0 34 .............................. GAGGGGCGACTGGAACAGATGCAGACAACCGTAC 248745 30 100.0 35 .............................. GCCCCACTCGCCCCGGTCGTCGGCCGTCTCGTCGG 248680 30 100.0 35 .............................. ACGGACAAGTCATCCACCCGCCAGTATCTCCCGGT 248615 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ======================================= ================== 37 30 99.9 36 GTTTCAGACGGACCCTTGGGCGGTTGAAGC # Left flank : CCTGTGCGGGAGACAGGTCTGTGAGAACCACTACGCCGAGAGCGACGGCATCTGTACCGCCTGTCTGGGCGACGCCGGGAGTCGGCCAGATCGACAGCCGACATCGGACGACCTGCCCGACGGCGTCGACACCTACGAGTTCTGAGACGGATCATTGTAGATTGTTGCTACCGAACAATTCGATACGGGTTTGCACTTTCCGGAGGTCACGCACTGTTCCACCGTGTTGCAGAGTCTCTACGTCACTCACAGGGTAGTCGATCCGGTCAAGACGTGGTTTATGAGGCTCGGTAAGTGGTGCGAATGTACCCACGGAGAGCGTGACTGGAAGATCGATTCTCTCGTCGACGGGCCGCTCGCCGACGCCGTCGCAAGCGATTCGGCCACGTCGCCGGCCTCGTTCCATCGACCCCCCAGGGGTTCAGGGGTTATTGCGGGTCGACGGAAATAGTAAAGTGAGTTCCGGCAGGATAGCCGCTATGGCCTCCAAATCGGCCATG # Right flank : AGCAATGTCATGGCGACGAGCGGCAACGCTTCGGTGGTTTCGGCTCCATTGAATCACTAGACAGCGTCGGGGTAGTGTCGATTTTCCGGTGTTCGATGGCCTGATCCGATTGATTTCGTTCACGGAAATCGACATCGACACGATCAGATCGCAGGTGACGTTGATATACTCCCCAGCTGGTCAACTGCTCTCCCGGTCAAAATCCGACTATTGATCGTCTATCCCGATAGAATCGACTGCCCTATGGCGATTCAATAGAGCCGCACATTCGGTCTGCTTGTGGTCGAGGTAGATGTCGCGCGCAGTTGTCGGTTCTATCGGTTCGAGATCATTTTCGTTGGTCGTCATGGTTTCTCACAGAGTCCCGTAAGAAGCTGTATACCGCCCGAATTCGCGACCGAAGGGAACCGGCGAGGTGTGGTCTGATGCCGCCCTAACCCATTCTCTGATTTCTCGCAACGACGAGCGTGACGGTTCTTTCGCCGGTCTGGAATCTACCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTTGGGCGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.60,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 2211579-2208051 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB905378.1 Halomicrobium katesii DSM 19301 HalkaDRAFT_scaffold1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 2211578 30 100.0 38 .............................. GATTCGTTACTGGTCAGTGGGATATCGTAGACCAGTTT 2211510 30 100.0 36 .............................. AAACCGGACCACGACGACGCGAGTCACTGTCCGTAC 2211444 30 100.0 37 .............................. AACTGGAGTAAGAACATGGATGCCTCGTCTCCGAGGG 2211377 30 100.0 37 .............................. GCCGTCGTTGCGGCCTCTGACGGCGGTCGAGCGTCGT 2211310 30 100.0 35 .............................. TACCGAAGCCCTGAGTCCATACACACGAGAGCCGG 2211245 30 100.0 35 .............................. GCACTGGATCGTCGGGCCGGTCGAAATGAAGGCGA 2211180 30 100.0 36 .............................. AGATGAGTGACCTAGCTGAGCGCGTCGACGCCCTGG 2211114 30 100.0 34 .............................. CGCTGATGAGTGACGGACGATAAGCACACAACGG 2211050 30 100.0 34 .............................. CTCTCCGGGCTGGATCGCCACCGAGGTTGCACGT 2210986 30 100.0 39 .............................. GAGCAACGTCTGCCCGAGCTGGCGGGCCTCGTCGGGCCC 2210917 30 100.0 36 .............................. TCCCACCGGCTCTCGCCGCCTTCGTCCATCAGACGC 2210851 30 100.0 37 .............................. GCTGAGCAGGAGGTTGAGGCATGAGCGAAGCAGACGG 2210784 30 100.0 34 .............................. CCGAGGTCCTGGAGGTGGTCCAGTCGTGCTGACC 2210720 30 100.0 36 .............................. AGACGGCACTATGACCACCCTCCAAGCGTCTGCTGT 2210654 30 100.0 37 .............................. CTTGCCCTGAATACCTCCGTTGAACGCGGTGGTAGTA 2210587 30 100.0 38 .............................. AAGTAACTCCGGCAAGAGCTCACCTAATGCCCGACCGA 2210519 30 100.0 38 .............................. ATTATCTTCATCTTCCCAGCGGAAGTTATCAATGTCTT 2210451 30 100.0 32 .............................. GATCTTTGACTCTGGTATCTCTGTCTTCTCCG 2210389 30 100.0 36 .............................. AGGATGTGTCGCCTGTCGGCAATGGACTGAAGGTCA 2210323 30 100.0 37 .............................. AGCGGGACGCCGATCCGCGTGTCCAGATAGATGGCGA 2210256 30 100.0 39 .............................. GTCCGTGAGTCCACAATTCAGGCACGTTGATATAGACGG 2210187 30 100.0 36 .............................. CACCGAATCCAACCGGAATGATGGCATTGCGCCATG 2210121 30 100.0 37 .............................. ACGAACAACCAGAGTATCCAGAGAACACCGATGACAA 2210054 30 100.0 36 .............................. CACGCTTCCATCATCCCCTCAAAGAGCGCACTGAGC 2209988 30 100.0 34 .............................. TCGCACAGTCAATCACGCCCCCTCATCAAACAGA 2209924 30 100.0 36 .............................. CCGCAAGACGGCGGGCAAATCCAGACGCGGCAGGTT 2209858 30 100.0 35 .............................. TCCCCGGATGGCCGCCCCAGCGGCGTCGTGCGCGC 2209793 30 100.0 33 .............................. CAGCTGCTCCTGAGCAGCGCCGGTCTGGGGCGG 2209730 30 100.0 35 .............................. ATTCCAGCAACGTGATCGAGGAGGTTGAGGGGGAC 2209665 30 100.0 35 .............................. TGGCGAAATTGCGCGAACGAGCAACTGGCGACGGT 2209600 30 100.0 35 .............................. TCGCCTTTGACCAGCTCCGTTGGATCTGTCTCGTA 2209535 30 100.0 35 .............................. GACTCTCGGCGATCCCAGCGCAACGAGAACGTGGA 2209470 30 100.0 36 .............................. ATAGGGACCGGCCACGTCAACCTCGGCAGTGACCGT 2209404 30 100.0 34 .............................. CTGTTCTGGCCCGGTACTCTCGCCGGTCGTCCGC 2209340 30 100.0 37 .............................. CACTCCCCGGCCCCGATACGGACGTGCAAGTCACCGT 2209273 30 100.0 35 .............................. TCGTGCGGCCCCCAGTCCGTCCCGCCTATTTTTGC 2209208 30 100.0 37 .............................. GTTGAGGAGCGGCTTCACGGTCGCGTCCTCAACGCGT 2209141 30 100.0 35 .............................. TGCTCCAGCGCGGTCCCTGCCTTCGCGACGTGATC 2209076 30 100.0 36 .............................. GCCGCTTGGGAGTCTCGTATTGGTGCAAGGGGCGGA 2209010 30 100.0 36 .............................. TATCTGTGCTGGTAGTTCCAACGGCATTTCGTTGAG 2208944 30 100.0 38 .............................. TCGGTGCAATCGCTGAGGTACTATCATGACCAAGAAGA 2208876 30 100.0 35 .............................. TGATTGTGTTCCATAGCCATAGTTACCCTCGCACC 2208811 30 100.0 37 .............................. ACGACCGGATCAACATGACGCCCGGCGAACTGGAGTC 2208744 30 100.0 37 .............................. GTCTAGCCCAGTCTGGTCGGGGTGGTCGGCAGGATCG 2208677 30 100.0 36 .............................. TGTGCTGACTGGTAAATATCGAGTCGCAATTGCTGA 2208611 30 100.0 37 .............................. GGTCGGGCGCTTGGTTCGCTCCTACCGGAGTTGCTTG 2208544 30 100.0 34 .............................. TTGGTAGCCCTGCTCGTGCAGTTGCACGTCGATC 2208480 30 100.0 36 .............................. CCCCATGGGCTGTCCGGCCGGCCAGCCAGGAAGTAG 2208414 30 100.0 40 .............................. CTTGTGTCGCCAAGGTCAAGCACTTCAGGCTTGAACTGTG 2208344 30 100.0 36 .............................. AGTGCCGAACTTGAAAGCGATGCACCGGCAGTGATC 2208278 30 100.0 35 .............................. CAAGTTACGCAAGACCTACACGACAGAGCCGAACT 2208213 30 100.0 36 .............................. GGTCATGGTTAGTGACCGGCGTAGTAACTAACGACA 2208147 30 100.0 37 .............................. ATGCAATATTTGGTTGTCGATATTCCCGACGACTGGG 2208080 30 86.7 0 ..............A.....A..CC..... | ========== ====== ====== ====== ============================== ======================================== ================== 54 30 99.8 36 GTTTCAGACGGACCCTTGTGGGATTGAAGC # Left flank : GTAGTTGTCCGTGAACCCGCTGATGACCTCGTGAATGAATTGGGTTCGCTCCTCGGTTAGCACTCCGCGCCGGTATTTCGTGGTGAGTATCAGGTGGTAGTGCAGGGAAAACGTCGAGTGCGCTCCCGAGTCGAGGTCGTACTCCATTAGGTTCAGTCAATATGATACTATCCTACTGCAAAAACATTGTGATTACGTGGGCCTGTGGGCTTTCTATCGAATTGTGTATGAGAACTGTGCGGCGTTAACGAGACGCTCGCGTCTCGTTCGCACACCAGAATCTTTGATTCTGGGGACGCTGTATCCCCTCCCTGCTCGCGCCTCCTGTTCGGTCGGCGCTCGCTGAGGAAGGGGGCTTAGCGCCTCAATTCAGCTAATACTGCCGGCAGTACAACCCCACTTCCATCGACCCCCCGGGGGTTCGGGGGCTATCGAAGGTCGACGGAAACGATGAAGTGTGAACGGCGAATAGAGGTGCATACGTGGCCCAATCGGCCATG # Right flank : ACTGTCGCTGGGGACGGTCGGCTCACTTCTTTCGGATCGTCCCGCCGCCGAGCCCCTCCCACTTGACTCGGTATCCGAGCGCCGACAGGACGGCGCTGGCGTCGTCGAGCCCGTACTCGTCGAGGACCGCCTCGGCGGCCGACAGCGACATTCCGGTCTCGATCTCGTCGTCGACCGCCGACAGCACGGCCGGCCTGACCAGCGTTCGCCCGACGCGCTCGTGGTCGGGAACGGATCGGTCCTCGACAGCGGCCTCGCTGACGCCGTGTTCCGCGGCCAGTTCGGCGAGCGTGAGCACGTCGGCGTCGGGAGTGAGTGTCTGAGGGAGCGTCGCGGCGTTTGCCGCCGTCAGTTCCGACTCGTATCGCCCCAGCGCGTCGCGAACGTCTTTGATCCGGACGGTGCCCGAGTAGGGGATGGCTCGGTGGTCGCGGGCCTCGATCTCCGCGCCGATATCGCCGGACTCGGTCCGTGAGGCCGACTGCTGGTCGGCGACAGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTTGTGGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGATTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.20,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 2905507-2908293 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB905378.1 Halomicrobium katesii DSM 19301 HalkaDRAFT_scaffold1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2905507 30 100.0 36 .............................. ACGCTCTTGTAAGTGGTGTCATAGTTGAGATTCCGA 2905573 30 100.0 37 .............................. ACGAACTGGCGAACGCAGAAGCCGTGGAACACGGCGA 2905640 30 100.0 33 .............................. TCGACTCGGATCGAGCGGCGTCGCCGTCGACGG 2905703 30 100.0 37 .............................. CGCGCACTGGTCTCGTCACCTCGATCGAACTCGTCAC 2905770 30 100.0 36 .............................. TCAGCGATGTTACTCGGGGTGTTGTCCCCATGTCTA 2905836 30 100.0 37 .............................. GACCGCGAGAGCAACAGTAGTTTTTCGTCTGACAGTA 2905903 30 100.0 34 .............................. AGGATGGGCGTCGGCTCCGGGCTGGCCGGAGCGT 2905967 30 100.0 36 .............................. CAGTCGTCCGCTTGAGAGGCTACTATCCTCTGCGGC 2906033 30 100.0 37 .............................. TACCGGATAGTTTTGGCACTCAGAGCCGTCAGAACAC 2906100 30 100.0 36 .............................. TTGTTAGAACCGGGACGAACAGTGCGGGTGAACCGA 2906166 30 100.0 37 .............................. TCACCGTCCGTCATGTTGTGCAAGCCCCCAGTCCCAT 2906233 30 100.0 36 .............................. CCAACGTGGGAGTCGAGAAACGCACTGGTTGACCGC 2906299 30 100.0 38 .............................. CGGCGACGGAACTGATACGAACATGACTGACAACGACG 2906367 30 100.0 36 .............................. TCGACTACACATGAGCAACTACACTTGCCCGATCGA 2906433 30 100.0 38 .............................. CCCCTCGCCGCCGGGAAGTGTCAGAATGCGGCAAATGA 2906501 30 100.0 36 .............................. GAGACCCATTACAAGACCGAACGCAGTTGGTGGAAG 2906567 30 100.0 37 .............................. CTCGATCTCATTGAACAGCCTGCGTAGTCCCGCCCGC 2906634 30 100.0 32 .............................. TTCGCGGCGATGTCGAGATAGCCCTGCGCTCG 2906696 30 100.0 35 .............................. CGCGAGGGAGTCCCGAAGCTCGTCCAGGTCGTCGA 2906761 30 100.0 35 .............................. TCACCCGACCAGACGAAGATCAGCAGGTGCCACCA 2906826 30 100.0 36 .............................. AATTACCAAAGGACTGCTGATAGAACCCGGGAGTTT 2906892 30 100.0 34 .............................. CGAACCTCACCGGCTCCACCGAGGAGAAGATTGA 2906956 30 100.0 36 .............................. CAGACGATCACGACCACGACGAACGAATCGGGCTAC 2907022 30 100.0 36 .............................. GAGAAACGCCTGGTACAGATCCGCCGAGACATCTGC 2907088 30 100.0 35 .............................. GTGCCACTCTGCGTAGTTCCATACGCCATCTGAGC 2907153 30 100.0 35 .............................. TACCACCATCCCGACCGGCGCGATCGTCGTCAACG 2907218 30 100.0 35 .............................. CTGATCGCAGCACTTGCGATCATTGTCCGGGTCAT 2907283 30 100.0 36 .............................. CTCGATTGGGATGGTTCCACTATCAAACGGATTGTC 2907349 30 100.0 38 .............................. AGTGCCGAACTTGAGAGCGATGCACCGGCAGTGATCGG 2907417 30 100.0 35 .............................. ACGCACCCAGCAACAGGTAGCCGTAGGTGGCGATG 2907482 30 100.0 35 .............................. CGGGACGACCAGGTCGACGTTCGCGGTGGTGTTGT 2907547 30 100.0 36 .............................. TGTGCCTTGATACTCCCATGTCCCGTCAAGAATCTC 2907613 30 100.0 33 .............................. GCTTGAGGGCGACGACGACAGTTATCAGCGAAG 2907676 30 100.0 35 .............................. ACTCAAACCCTTGATTCGACAGTCGAAAAGTACGG 2907741 30 100.0 36 .............................. GGGGGTCGCTCATGCTACTCGCTCCCCCTTGCGGGC 2907807 30 100.0 35 .............................. AACACTCGAACCGGAGACGACGAAACGTGGAACGA 2907872 30 100.0 36 .............................. ACCGACGACGGCCGCGTCGATCGGCAGTTCGCGATG 2907938 30 100.0 35 .............................. GGCTTGCCGATTAGTGTTTGCGGCCTGTGAGTTGC 2908003 30 100.0 36 .............................. GCGGAGTACAATCGCGTCCCGACGCCGCTGCTGGAC 2908069 30 100.0 35 .............................. GATGTCCGGAGGCGAATCTGATGTCTGACGACACC 2908134 30 100.0 35 .............................. TTCGCGCTGCTGTCCGGTCCCTGGTAGAGGGAGTA 2908199 30 100.0 35 .............................. TATCCTGGCGAGTTCTCGCCGTCGACGCACGAGGG 2908264 30 93.3 0 .......................CC..... | ========== ====== ====== ====== ============================== ====================================== ================== 43 30 99.8 36 GTTTCAGACGGACCCTTGTGGGATTGAAGC # Left flank : GTCGATCTCCTTGACCGTGATCGTCGCCTTCGCCGGGACGCTGTCGGGAGGATCGTCGGGTCCTTCCTCTCGTTCGCGGGCTCTGTCGCCGTCCGCGCCGTCGCCGTCGTCGGCCCCATCCGGACGATCACTCCGTTCGCGAAACGCTGCGAGGGCCTCGGCGTAGTCCGCGATCTGGCGGAGACGGGCCGGCGAACACTGTTCGAGTGCGTCGCCGAGATCATCGGGCAGGTCTCCCGGCGGCGTCGGCGGATCGTCGCTCACTTCGATCAGTCTGTAACCAACACAGACCCCACTACCGTCGTTCTGTTGGTTAAGGCGGTCGAACAGACCCCTCTGTCGCCGGCTTCTCGCCACGTCGACGGTGTCTCGCCTGCCTACCGACCGAGGAAGTACGTGTTTCCATCGACCCCCGGGGGGTTCGAGGGGTATCGAGGGTCGACGGAAACGATGAAGTGCAAACAGCAAGTAGCGGTGTATACGTGGTCAAATCGGCCATG # Right flank : CTAGACGGAATCGTCCGGCGACTGCCACAGGGCTTCCAGATCGTCTCGCAGATACCGGATCGATTCGTACCGGTCCCGCTTTGCGGTCGCCAGCGCCGTGCGTACGATCTCGTCGAGTTCGGGTGGCACGTCGTCACGATCGGCACTCGGGGCTGGCGGTGGCCCGTCGTCGCGGACGATTCGCTTGCGGACGGCGAGGCGGCCGCCGCTCACGGGGGGCTCGCCGCGTAGCATCGCGTACAGCACAGCGCCGACCTGGTAGATATCCGTGACGGCGTCCGGTTCGCCGAAGGTCTCGGCGTCGAACTGTTCGGGCGCGGCGAAGTGCCGTGAGAAGCCTTCCATCGAGTCGGTTCGGTCCAGTAGCTTTCTCGCGAGGCCCCAGTCGGCGAGCTTCGGCAGGTCCCAGCGTGACGGTGTCGTTTCGGTGAAGAGGACGTTCCCCGGCTTGACGTCCAGGTGGGCGATCCCGTACTCGTGTGCGACTTCGAGCGCGCGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTTGTGGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGATTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.20,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //