Array 1 167824-170230 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHRXK010000005.1 Klebsiella pneumoniae strain SKp2F Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 167824 29 100.0 33 ............................. CAGAAGAGGCATTAATAGAGGTGGTAAACCGCG 167886 29 100.0 33 ............................. TTGGCGGTCGACGGTGGCGAACTGCCTGATCAG 167948 29 100.0 32 ............................. TCGTAGCTAATAAATTCGTTGCTCATTTGAAA 168009 29 100.0 32 ............................. GCATCGCTCGCCTCGTTCGGTGCTAACGCTGG 168070 29 100.0 32 ............................. CGGCTGCGCTGTTGCACATAGCCGCTCAACCT 168131 29 100.0 32 ............................. CGGCCGCGTTCTCCCCTGTGGGAGGGGTGGGG 168192 29 100.0 32 ............................. GAATTTATTGGGAGGTGATAGCTCTGGCAGGT 168253 29 100.0 32 ............................. CGTCACGACGCCGGCGACAGTGACATCATCCA 168314 29 100.0 32 ............................. GGTATGCAGGGCACACGCCAAAATAATTTTGC 168375 29 100.0 32 ............................. ATACGCAGTCATTAATCGCGGGTGTTACGCAA 168436 29 100.0 32 ............................. CCTCTCCCTATGCCTCGGCACCTTGTGTGCAG 168497 29 96.6 32 ............................C CGATCGACCTGGGTGATACGCAGGGCGTGCAG 168558 29 100.0 32 ............................. ATTTTTCATACCTGGCCGGTTGTCTTCAGGGA 168619 29 100.0 32 ............................. CCTGCTGTCATTTCCTTCGGCACTACCGGCGC 168680 29 100.0 32 ............................. TTACACAAGAGAAGCACTGACAACCATTCACA 168741 29 100.0 32 ............................. CCTAAATTGCCAATTTTCCTTGAGCGCTGGTA 168802 29 100.0 32 ............................. GTAACAGGTCAACTCTTTATCGCTAACGGCTC 168863 29 100.0 32 ............................. CTTTTCATTTTCTCATGACCGCCACCATTTCG 168924 29 100.0 32 ............................. AATACCGGCGGCAGGGATTTACGCCCGAGCAG 168985 29 100.0 32 ............................. CGCACGGTGCATTCACGCCCGCGCGCCTGTTT 169046 29 100.0 32 ............................. CATCGCTTTCCATCGCAGCTTTTTCCAGGCGC 169107 29 100.0 32 ............................. GTGACGCGCTGCAGTTTGCCAAAACCCTGCCA 169168 29 100.0 32 ............................. ATTTTGCGTACGCTCTCCCACAGCTGATCGTG 169229 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 169290 29 96.6 32 A............................ GGTTTATAGAGGCTGAGGTATTCACAATGCGC 169351 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 169412 29 100.0 32 ............................. GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 169473 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 169534 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 169595 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 169656 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 169717 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 169778 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 169839 29 96.6 32 ........T.................... GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 169900 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 169961 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 170022 29 96.6 32 ............T................ GTGATCGTCATGGATATCACTGCCGTTCCGTC 170083 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 170144 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 170202 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 40 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGTAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTAGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGTG # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //