Array 1 26031-26212 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWMV01000170.1 Methanobrevibacter curvatus strain DSM 11111 MBCUR_contig000170, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 26031 37 100.0 35 ..................................... ATAATTTAAAATTATATTTTGATGAAGACTTTGAG 26103 37 100.0 36 ..................................... TAAGAAAAAAGGAGTAAGATAGTATGAATTATAAAT 26176 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 3 37 100.0 36 GTCGCAATCCTTGTTTTAGTAGAACACTCTGTGCAAT # Left flank : ATTTCAAATTTATAAATAGTGTCTTTACAACATTTAAAAATAGTAGTATCTTTAATAAACTTAATCTGGCTATTATCTAAATTTTTAACCATATTCTTAAATTCTTTTTCACTGAATCCATATTTATTTTCTAATGCAGAATTCCATTTTCCACCATAATTTCTAAGACAATCATTAACAACATTACTGTTATCATAATAAACTTTCATAGCATCTTTTACATTTTCAGGATAATTTTTACTATAAGTTTTATCTAATTTTTTTAATTCATCATAAGATAATTGACTAATTATATTCTTATAATCACTATAATCAGTTAATATTTCATAGTCACATTGACAATTACCTGACCAACAAGTTTTATCATTATATTCAACCCATAAAGTATTGTTTTTTTCTAATTCAACACATCCAACTATGCCTTCATAATAATAAGTACTAATATACTTTTTATTACAATTGAAACGAGTGTTACATGTTCCTAAATTAACATGAATGGA # Right flank : TAGCACCCAAATTTTCCTTGAAAATTGGATTTTATATACTCAAAGTTCTGCTTTTTGTAGTCATTTTGTGCAAACCTATTTGGATGACTACATATATAAAGGTTTGCTCAACTTATATAAATACTTTTTTATTTAATTTTTATTAGCGAATTGTTTTATTTTAAAAAATTTAAAAAAAATAGCTGTTAATTTTATTTTTATGAGGTAAAAATCAATTAAACAAAATTAAATTCACTTTAATAAAATTAATTTTTTCTAAAAATTTTATATTTTTTTATTTTGTTCAACTTATTTAATAGGTTTGCTCAAAATCTTCTCAAAATGGCTTTAATTTTCTTCTTTTTACCATCGTCTATAGAATCCAATGTAGTCTTCTGTTCCTTCTAAAAATTTTCCAATTAATTTTGCTTGATAATGTATAATATCAGAGTATTTTGTTTCTTTATCATTAAAATTAATTTTATTTGAAAGCTTTTCTTGAATAGTTTTTATTAGAGTTC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATCCTTGTTTTAGTAGAACACTCTGTGCAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 319-155 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWMV01000175.1 Methanobrevibacter curvatus strain DSM 11111 MBCUR_contig000175, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 318 31 100.0 35 ............................... GAATATGTCCAAGTTAATAAATGGTCATGAGACAT 252 31 100.0 36 ............................... ATTGTTTTAGTTGTTCTTGCTATTGTTGCACTTGTA 185 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ==================================== ================== 3 31 100.0 36 ATTAAAATCAGACCATTACTGGGATTGAAAT # Left flank : TATCCGAAGTTTACAGTATTCGATTATACAAAAGATTATTAAAATCAGACCATTACTGGGATTGAAATGCACCATAAGTTTGGAAAATAACTATTAGTTTCATATTAAAATCAGACCATTACTGGGATTGAAATAATAATATTAATAATTTATTTTCTTTAAATAAATTAAAATCAGACCATTACTGGGATTGAAATTGCACACAAAACAACACAAAAATATAGTTGACACAATTAAAATCAGACCATTACTGGGATTGAAATGAATATGATGGTAAAGATGTAACCTGGCTAATAATGGGGTTTTAATTATTGATGAGTTTATTGAAATGAATATGATGGTAAAGATGTAACCAGATTACACATGTAGACTTATGATTAGATAAAACTGATTGAAATGAATATGATGGTAAAGATGTAACTATACAGATATTCCTGATATTGGGGAGAAAATATAATTGAAATGAATATGATGGTAAAGATGTAACAGGGATTGTATTT # Right flank : TGCACTAGTGGAAATAATAAAGAATTGTGAGAGAAAGGCAAAACCTTTTTGTGTAGTTTTTCTGGTGGGGGATTTAGTAGATTTTGGTTTTGCAAAATGGTCAAAACTTTCTTTTTGAGTTTTTTTCCTAAATTTTTAAGGATATTTCTTTTTTT # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAAATCAGACCATTACTGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 2 3934-556 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWMV01000175.1 Methanobrevibacter curvatus strain DSM 11111 MBCUR_contig000175, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 3933 31 100.0 36 ............................... GTCGGAAATAATGTTCTTTTAAGTAGTGATAATTAT 3866 31 100.0 36 ............................... AAGAATAATTATGGTCAAGCAATAGGTTGGTATGTT 3799 31 100.0 36 ............................... TAATAATAGCTATAAATAAACCAAAACCCAGCATTA 3732 31 100.0 36 ............................... AGTGAAACTCTTTTAAAAAATTCCTCTTCATCTATC 3665 31 100.0 37 ............................... TATCCTCATCAAAAGATTCTTTAAAATTATATTTTTT 3597 31 100.0 36 ............................... AAGAATAGGAATAACTCCCCTTCTTCAAATAAATAC 3530 31 100.0 36 ............................... CCACTAAAACATGAATGCAATCTCTTTCAATAACAT 3463 31 100.0 34 ............................... CGTAATAAAAATGTTTATTAAATAATGAAATCAT 3398 31 100.0 37 ............................... CCAATTAGAGCAGAATCAACATTATATCCAAGAGCTA 3330 31 100.0 37 ............................... ATTATACGATATTAATATCTATTATAACAAAAATATT 3262 31 100.0 36 ............................... TAAAAACACAACAAAATAATAAGTAACAAAAAGTAA 3195 31 100.0 36 ............................... CAACAAAAAAAATTGAATACTAAAGGACGACCATAA 3128 31 100.0 35 ............................... GACAATGCTAAAATAAATAATAGTGATTCTGGTGA 3062 31 100.0 37 ............................... AATATCAATATGACTTTTAGCCCTAATATCTTAATTA 2994 31 100.0 36 ............................... CGAGTAGTAGGAGATTAAGGGGGAATTAGATGATGA 2927 31 100.0 35 ............................... AAACTCACAAGCAACAATAACCATACCCGCAAATA 2861 31 100.0 37 ............................... GACAATGCTAAAATAAATAAATTAACAATAGATTGGC 2793 31 100.0 38 ............................... GTATTTTCTTCATGTATAATTTTAAAAATTATGAATAT 2724 31 100.0 36 ............................... TAATACATAAAATTATATAATTCCTCCCAGTATTTC 2657 31 100.0 37 ............................... TGTTTTAGCTGACCGTGAAAGAATCAAGAAAGCCAGT 2589 31 100.0 38 ............................... TTAGAAGCAGTTTATGCTCATGAGGAAATTTTTAATTA 2520 31 100.0 35 ............................... ATACCATAAGCTTTAATTGTATGTTTATGTCCGTG 2454 31 100.0 37 ............................... CTTATGGTCGTCCTTTAGTATTCAATTTTTTTTGTTG 2386 31 100.0 35 ............................... CCTCAAAATCCTCATCAAAATATAATTTTATATCA 2320 31 100.0 38 ............................... AAATATACTACAAATTATACTGTTACAGCTGATTCAAA 2251 31 100.0 36 ............................... ACCAGTAGCATAATAAGCATTCCATAATGTACCAAT 2184 31 100.0 36 ............................... TACTGGTTGTCAATTCGGAACATTAACAACTGATGA 2117 31 100.0 35 ............................... TTATTAGGTGGTTATACTTTAAAACAGGTTTCTGA 2051 31 100.0 36 ............................... GGTTAATATTTGCAACACCATAAGCTTTAATGGTGT 1984 31 100.0 36 ............................... ATTTGTATATAAAATTGAGGAAATTGTTAATTTAAA 1917 31 100.0 38 ............................... TATACTAATAGTATTATTTATTGTTGTCCTTTAGTATT 1848 31 100.0 37 ............................... ATAAAAAGCATAAGAACATTAGCCGAACAATTAAAAC 1780 31 100.0 36 ............................... ATCTATAAGTTTTGTATTCTCATTTTTTTCAACAAA 1713 31 100.0 35 ............................... AGGAATATCATCATCGTCCCAACATTCTTGACAAA 1647 31 100.0 36 ............................... CACACACAAACAAGAACATCAACATAAACAAAAAAA 1580 31 100.0 35 ............................... TACTTGTTCAATGTAGATTAATCTTAGGAGAACTA 1514 31 100.0 36 ............................... TATAATAATGGAGATAAACCAAATATCAATATGACT 1447 31 100.0 35 ............................... GTAGGTTTATGGTACATAATAGAAGATGTAAATAG 1381 31 100.0 36 ............................... CAATCTCCAACTCCTAGTGAATTACCAATAAATAAT 1314 31 100.0 32 ............................... CAACAACACACACACAACCAGAAAACCACAAA 1251 31 100.0 36 ............................... CAAACAAGAACACAACACAATAAAATAAAAATTAAT 1184 31 100.0 36 ............................... CTACTTTTTAAAACTCTCAAATTCAGATTTAATAAA 1117 31 100.0 35 ............................... TCCTCTTTTGATGATTTAAAAGAGAGATGGTTTGA 1051 31 100.0 37 ............................... CAACTAAGACATGTATAATTGTCTCTTTCAAAAATAT 983 31 100.0 36 ............................... AATAAAAATTGATAAGAATGGGTGGATATTCTTATC 916 31 100.0 37 ............................... ATAAAAAAAGATAATACAATTGTGGATTTAACTCAAT 848 31 100.0 36 ............................... ATCCGAAGTTTACAGTATTCGATTATACAAAAGATT 781 31 100.0 35 ............................... GCACCATAAGTTTGGAAAATAACTATTAGTTTCAT 715 31 100.0 32 ............................... AATAATATTAATAATTTATTTTCTTTAAATAA 652 31 100.0 35 ............................... TGCACACAAAACAACACAAAAATATAGTTGACACA 586 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ====================================== ================== 51 31 100.0 36 ATTAAAATCAGACCATTACTGGGATTGAAAT # Left flank : TAAAAGTGAATATAACTACATTCTATCAGAATTAAAAAAAATAGTAGATGAAAATGAAGATTCCATTATAATATACAAGTTTAGAACTGATAATGCTATGAAAAAAGAAATTATTGGAATCGAAAAATCACCTATTGGAGAAATACTGTAAAAAACTTTCAAATCCCTAAAACTTTATTTCAAATCTTTAAAAATAAGATTATCGTTTAATTAATCTATCGTTTATTATATTAAATGTTGATAATTTTATTGCAAATATTTTTATTATTTTCTTTTTTTAGGTTAAACACTGCTTAAAATGCCTTAAATGATATTACACAAACAATTTTTAGCTTTTTAGATTAATAAATAATTAATTTTTATTTTTTGAGAAACAATAATATTATTATACAATCGTTGTTTCATATAAACTAATTACATTATCATATATCGCAAAATTTAAGTATGAAAACTACAAATATAGTAATGGAATTAGGCTTAATGAAGCAAAATTCCAACCT # Right flank : GAATATGATGGTAAAGATGTAACCTGGCTAATAATGGGGTTTTAATTATTGATGAGTTTATTGAAATGAATATGATGGTAAAGATGTAACCAGATTACACATGTAGACTTATGATTAGATAAAACTGATTGAAATGAATATGATGGTAAAGATGTAACTATACAGATATTCCTGATATTGGGGAGAAAATATAATTGAAATGAATATGATGGTAAAGATGTAACAGGGATTGTATTTATTAAAATCAGACCATTACTGGGATTGAAATGAATATGTCCAAGTTAATAAATGGTCATGAGACATATTAAAATCAGACCATTACTGGGATTGAAATATTGTTTTAGTTGTTCTTGCTATTGTTGCACTTGTAATTAAAATCAGACCATTACTGGGATTGAAATGCACTAGTGGAAATAATAAAGAATTGTGAGAGAAAGGCAAAACCTTTTTGTGTAGTTTTTCTGGTGGGGGATTTAGTAGATTTTGGTTTTGCAAAATGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAAATCAGACCATTACTGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA //