Array 1 928-3944 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUOI02000013.1 Klebsiella pneumoniae strain AS004157 AS004157-illumina-1_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 928 29 100.0 33 ............................. GCCCGCGCGAACCTGGGGCTGGGAGATTCAGCG 990 29 100.0 33 ............................. TTGGCGGTCGACGGTGGCGAACTGCCTGATCAG 1052 29 100.0 32 ............................. GGGGGGAAATCAAGGTCAAAGTTGAGCTGGAT 1113 29 100.0 32 ............................. CCTCGATCATTCTTGCCAGTTGGGAGTCGGAC 1174 29 100.0 32 ............................. TCGTAGCTAATAAATTCGTTGCTCATTTGAAA 1235 29 100.0 32 ............................. GCATCGCTCGCCTCGTTCGGTGCTAACGCTGG 1296 29 100.0 32 ............................. CGGCTGCGCTGTTGCACATAGCCGCTCAATCT 1357 29 100.0 32 ............................. CGGCCGCGTTCTCCCCTGTGGGAGGGGTGGGG 1418 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 1479 29 100.0 32 ............................. ATACGCAGTCATTAATCGCGGGTGTTACGCAA 1540 29 100.0 32 ............................. CCTGCTGTCATTTCCTTCGGCACTACCGGCGC 1601 29 100.0 32 ............................. CCTAAATTGCCAATTTTCCTTGAGCGCTGGTA 1662 29 100.0 32 ............................. GTAACAGGTCAACTCTTTATCGCTAACGGCTC 1723 29 100.0 32 ............................. CTTTTCATTTTCTCATGACCGCCACCATTTCG 1784 29 100.0 32 ............................. AATACCGGCGGCAGGGATTTACGCCCGAGCAG 1845 29 100.0 32 ............................. ATTTTGCGTACGCTCTCCCACAGCTGATCGTG 1906 29 100.0 32 ............................. TTTCCGGCAGCGTAGCCAACCCGGCCAACCGT 1967 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 2028 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 2089 29 96.6 32 A............................ GGCGCCGGCCTGATCACTATCGGGTAACGGTG 2150 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 2211 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 2272 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 2333 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 2394 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 2455 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 2516 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 2577 29 100.0 32 ............................. GGCCCAGTAATCCCCGCGAAGTCCTGAAGACG 2638 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 2699 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 2760 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 2821 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 2882 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 2943 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 3004 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 3065 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 3126 29 100.0 32 ............................. GAATATAAAACCGGATTCCATATAGCCCTGTG 3187 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 3248 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 3309 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 3370 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 3431 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 3492 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 3553 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 3614 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 3675 29 100.0 32 ............................. GAATTTATTGGGAGGTGATAGCTCTGGCAGGT 3736 29 100.0 32 ............................. GGTATGCAGGGCACACGCCAAAATAATTTTGC 3797 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3858 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 3916 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 50 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGTG # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTCTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGGAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //