Array 1 26967-29392 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACTSK010000001.1 Francisella philomiragia strain F1089 philomiragia_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 26967 37 100.0 35 ..................................... GTAATGAGGAGGCTATGAATGGTATTAGGGCAGCT 27039 37 100.0 35 ..................................... ATATTTGATTATGGCCAACGAATTTGCGGAACGGT 27111 37 100.0 36 ..................................... AATTCCTGCACTAAAAAATAAAAAATATAGTTTGAA 27184 37 100.0 35 ..................................... TTCAAAACTTCTGATACTAAAAATTCTTGATAAAT 27256 37 100.0 36 ..................................... TAAGTATAGTTGGCTTAACAAGCTTCCATTCATCAA 27329 37 100.0 36 ..................................... TTGGTTCGATCTTTAAAACTCTTGCTAGTTCAGCTT 27402 37 100.0 34 ..................................... GCTAGATGGTTTATGGGTGCATCAAAGCCAAGTA 27473 37 100.0 35 ..................................... GTGATAGCACTGTTTTAAGCACCAAAGAAAGATAT 27545 37 100.0 36 ..................................... ATTAGTACTTGATGATGTTATTGTCGGTTTCATGGA 27618 37 100.0 34 ..................................... TTTTAAATATGTATTTTCCCTGTGGAAAAATATT 27689 37 100.0 37 ..................................... TAGTAAGTACCTTTTTGTTAGGTTTCCATTCAATGGA 27763 37 100.0 36 ..................................... AGATGATGTGGTAGGGGATGTTAAAAGAATGATTCT 27836 37 100.0 36 ..................................... TAAAGATGTGGGTTTCTGCGAGCTAGATCCTTTTGT 27909 37 100.0 37 ..................................... GGTAAGCATTTTGAGTGTTAGTTTGTGTTGCTGATTG 27983 37 100.0 35 ..................................... ATTTATGAGGGTGATATTGTTATTAGAGACCTCGA 28055 37 100.0 35 ..................................... GATTATGATTTGTATTACAAGTTTCAAAGCGTTCC 28127 37 100.0 37 ..................................... AACACATTATTGCTTTTGTACCCTCTTCGATATGATT 28201 37 100.0 35 ..................................... CTTATATTGACTGGCAATGCTCAATTTAACTTTGA 28273 37 100.0 34 ..................................... CCATGACGGCAATGCTTGGGTTTCCGGCAATGCT 28344 37 100.0 36 ..................................... TTTAGAATCTCGACAAAAAGGCGGCGGTACTATTGT 28417 37 100.0 34 ..................................... CTTTCACTGGCACAGCTCAATCTGCTATTGCTGT 28488 37 100.0 35 ..................................... CCAGTAGCAACGACACCGCTAGCATGATCTTCTAA 28560 37 100.0 35 ..................................... ATTTATGAGGGTGATATTGTTATTAGAGACCTCGA 28632 37 100.0 35 ..................................... GATTATGATTTGTATTACAAGTTTCAAAGCGTTCC 28704 37 100.0 36 ..................................... AGAAAATGTACATAAAGAAGTAACTTGCAAATATTT 28777 37 100.0 36 ..................................... CAATAGCAGTTTAGCCGTTGGCACATGGATAAATAA 28850 37 100.0 34 ..................................... AAAGAAAGACAAATGATTAATATTGGTAAGTTGG 28921 37 100.0 37 ..................................... GTTTAGTTTCTACAGCTAATAATGTAACATCGCTTGG 28995 37 100.0 34 ..................................... AGAACATTGCCAGTTTAAGATAACGCTGATAGAA 29066 37 100.0 35 ..................................... CGAGATGGCTTAGTTTTCTTAATCATGGGCTTTAC 29138 37 100.0 36 ..................................... CAAAAGAGCAATGATTGCATGGTTCCTAAATTTTTT 29211 37 100.0 35 ..................................... CAAATTGAGGATCAACTTCAACTAACATATGTATA 29283 37 100.0 36 ..................................... AATTTTACTCGCAATTAGGGTTATATTTTTTTAGGT 29356 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 34 37 100.0 35 GTTTCAGTAGCTAGAATATTTGGTATACTACTGTTGG # Left flank : CATTTTGGGCCAATCATAGTAAAAATGCTGAGTTTATATCTGAGCTAATAAACTATATCTATAGCAATAGCGACTATACGAGTATTATAAATAATGATCTTGCTTTGGTTGGTTTCTCTGCTGGAGGATTAGCTACTTTGATAGCGACATCAGAGAATACTAGGGTCAAGCTTTGGATAGGATTAGACCCTGTAGATGTAGGCAATCTTGGCTCTCAAGCCGCCAAGAATATAAATTGCCCAACCTATATAATAGCTGCCTCAGCAAGCGCATGTAATGCCAATAACAACTACAAAAACTTCATAACAAATCTAAAAGAAAACAATCTTATCAAAATTGATGGAGCTGTACATGTCGATGCTGAATGGCCAACTAATAGATTCGCTGAGTTGTTCTGTGGTAGATCCACACAGCAAAAAAGAGAAAGATTTCATGATGATGTGTTGACGATTTTGGATAAGAGTTTTAAAAATGAAAGCTATATACAAAATATAAAATGA # Right flank : GAGCCAAAATAAACCTAGAGTTTATAAGGCTTTGCGAGAATAATTTATTGGTGTTTTTTCGCAAACACCCTACTTGTCAAAAAAAGTAGACATTTTGCGAAAAAGTATCTAAAATAGATTTTGTACCAAATATTTAATGCTCTGTAATCATTTAAAAGTATTTTGAACGGACCTCTGTTTGACACGTCTGATTGATATAAAACAAAAAATTGCCATTTAAATGGCTTTTTTTGTTTGTGTAAATATGGATTTGATAGATACCCAATCAAGTTGGGTATTACGAATGGTATTTGTATAATGCTTATCGAAATTCCTACTAAATGGCGATCTAAGAAAATCAAGCTGAGTATTGCAAATTAACTCTATACTTTACAGGAACTTGATAGGGTTGATGACCTTTTGCTCTTAGCGATCATTGCAAAAGTTAAGATACTCACATTGTATACATTGATGACCTGTTGCTGATGAATCAGGCTTATTGCCATTATCAAGAGCATTTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTAGCTAGAATATTTGGTATACTACTGTTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.30,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //