Array 1 153297-151312 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFIJ01000002.1 Gilvimarinus polysaccharolyticus strain YN3 Scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 153296 29 100.0 32 ............................. CGGCCAACTTAATCCGCGATTCGGCAAAGCAA 153235 29 100.0 32 ............................. GCACGCAACTCTATGCAATCGACCCCACCGAT 153174 29 100.0 32 ............................. AAATATCGATGGGCTACACTGCCGAGATCGTG 153113 29 100.0 32 ............................. TTTTAGCCCAACATTTACAAACGCTTGCGATT 153052 29 100.0 32 ............................. CAATTCCCGACGATTTAATCCCTACCGCGTGG 152991 29 100.0 32 ............................. CGGCAAAAAAACACTGGCTACGCGTGCAGGAC 152930 29 100.0 32 ............................. TGTTACCGTCGTGTCACCGCCGTTAAAACTTA 152869 29 100.0 32 ............................. CACCTGCCCCACCGTAATACCCCTGTGCTGCA 152808 29 100.0 32 ............................. AAGAAGACCTAGCCTGTATAACTAACGTGTCA 152747 29 100.0 32 ............................. GCGATGGACGAGGTCGCTATGTGCGCCCCAGA 152686 29 96.6 32 ............................T GTGGCTGCTGTGGAGCTGGCGACGATTCGCCC 152625 29 100.0 32 ............................. CCAGTTGAGTGCGGCCCCGCGCCACCAGTTTT 152564 29 100.0 32 ............................. CAATCACGGAGACGATAACGAGCAACCATTCG 152503 29 100.0 32 ............................. ACGGATTTATCTTAATACAGAGGGCAGGGCAA 152442 29 100.0 32 ............................. GGCTAATGTACATCGGCGATACAGTCGATATT 152381 29 100.0 32 ............................. CTGATTGCGCGCTCTGGCCAGCGCGATAGGCG 152320 29 100.0 32 ............................. CAACACACTGCGACGAGCGGTTAGCGTACCCG 152259 29 100.0 32 ............................. GGTGCAACGTGGACATTCCACCCACCTATGCG 152198 29 100.0 32 ............................. ATTGGACGGAAGTTCCGTTTATCGGCTATTAC 152137 29 100.0 32 ............................. TGTAAAGATTAAAAATAAACCCTGTACTTTAA 152076 29 100.0 32 ............................. CGAGAAAAACAGCGATAGGAGCAAAAATAAGA 152015 29 100.0 32 ............................. TTTGGGAGATGGACACAGCAGACGGCAAAAAA 151954 29 100.0 32 ............................. GTAGCGGCGATCCCTACACCGCCTTTGGCCGG 151893 29 100.0 32 ............................. GTTGAGCTGCTAGAGACGATACATGTTAGCCA 151832 29 100.0 33 ............................. TACAGCTCCCACGCAGCTAGGGGCATTTTACGC 151770 29 100.0 32 ............................. ATTTCTGAACGCCGCGTATTAAATTTGGTGAA 151709 29 100.0 32 ............................. TCGTTCGCATCTACAACGGATATTGCGTTTAG 151648 29 100.0 32 ............................. CATCAGGCAATCTATAGTCACATGAATATTGA 151587 29 100.0 32 ............................. TGATTAACTTTCTGCAATTGATCCGAAGTAAA 151526 29 100.0 32 ............................. TTTAGGCCTCCGAAATTGTTGTTTATGTTTGT 151465 29 100.0 32 ............................. CCGAATCAATACGGGTCGAACACCTAGAGCTG 151404 29 100.0 32 ............................. ATGCAAGCATTTTCGCGTTACGTAACGCAAAA 151343 29 96.6 0 ..............T.............. | G,TT [151315,151317] ========== ====== ====== ====== ============================= ================================= ================== 33 29 99.8 32 CCGTTCCCCGCAGGCGCGGGGATTAACCG # Left flank : AGCCTTTTGAGGCGCATGATTCCATTAATTGAGGAGGTGCTGGCCGCTGGAGAAATCGTGCCCCCACCACCGCCTGACGATGCTCAGCCGCCTGCGATTCCCGAGCCTGACAGTATTGGTGATAGCGGACACAGGAGCGGTTGATTATGGCAATGCTGGTTGTTGTAACAGAGACAGTCCCCCCTCGTCTGAGAGGACGTTTGGCAATTTGGCTGCTAGAGGTGAGAGCTGGTGTTTATATTGGCGACGTTTCAAAACGAGTACGAGAAATGATCTGGCACCAGGTGAGTGCCATGGCCGCAGATGGCAACGTGGTCATGAGCTGGGCAACCAATACAGAATCCGGTTTTGACTTTGTCACCTACGGGGCCAATCGTCGTGAGCCTATCGAGTTAGAGGGTATGCGCCTAGTTCGATTTTTGCCAGAAAACCCGCTCCAATAAATCCGTAGAATTTTCACTATGTGATTTGCTCTTTAAAAACAAGTGGTTACAATTAGT # Right flank : TTCAGGCAGTGGCTTTACTATATAGACAACATTCGGTTAGTGGAAAAATAAAATATCGTTGATAAAAAACCCGCTTCGGCGGGTTTTTTATTTGAATCTTATTAAAATAAAATTCTTCTTGCCTCTTCTTAGTGTAATGTCATCAAAATCAAAAGAGTCACGCCTTTAACATAAAAATAAGAGGTTGTTTTAGCCTGTATTATTCCTGTCTAAGCCGGATTTTTGTTAGAGCAAAAATCAAGATTTTACCCTAATTGATGTTTGTCTAGAGCGAGGCATGTTTTTAACATGCGCCCCAATGTTTAGGGCGCACATTCCGCATGTTTTAGTTTCTAATGCGGCTAACTTTGTCGTCTTTAAAGTATACGATCATGGTGTTAAAGCGACTGTTCCAGTACTTCCACTCATTATCATCGGTTGAGTGAGTTTCGTGGGCGGGCGGATAGCCACGCGCTAATAATACGGCTTTTTTACTCATACCTTTTTTAACTTCGCCGCGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCAGGCGCGGGGATTAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGTTCCCCGCAGGCGCGGGGATCAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //