Array 1 99941-103752 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACIDX010000011.1 Novosphingobium sediminicola strain DSM 27057 Ga0373243_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 99941 32 100.0 35 ................................ CGCCACGGTCCATTTGCAAATCGTGGAGATAGTCA 100008 32 100.0 36 ................................ GAGAGCGGGATGCTTGGAGCGCGGCAACAGTGGGAA 100076 32 100.0 34 ................................ CATGGTATTCGGGGCCTATGACCGCGCAATTCCC 100142 32 100.0 36 ................................ CCACATAGCGCTCTTGCAGTTCCACGACGATCTGGC 100210 32 100.0 34 ................................ ATTCTTGGAGCCAGTGCCCTCCATCAGCCCAAGG 100276 32 100.0 33 ................................ GCTTATGCGTCCGCATGATGTCGATTGTTTGTT 100341 32 100.0 34 ................................ ATATTTGACAGCCCTGCCGCCTGCATGATGGCTA 100407 32 100.0 34 ................................ CCGTTCAAGATGATGGATTTTTCGAAGGTGTGAT 100473 32 100.0 31 ................................ ATCTCTTCGTCGCGCTGCCATTTGGCCAACA 100536 32 100.0 35 ................................ ATTGATCCTGCGCGCCCGCGCGGCTCAGGCCACGC 100603 32 100.0 35 ................................ GCCACCCCCGCTGCAATTAGGGCTTGGGCGTCCGC 100670 32 100.0 34 ................................ CTTGGCCGCGTGGCGCAGTACCCGGATGGCACCT 100736 32 100.0 34 ................................ ATGGATGATCCTCGGTCGGCACGATGGACAGGTG 100802 32 100.0 35 ................................ AATGCCTCGCCGCAGCGGTCCTCCATCCAGCTGCG 100869 32 100.0 35 ................................ ATAGTCGGCATGAAGCGGTGCTAGGCGCAGCAGGG 100936 32 100.0 34 ................................ CATGAGATAAGCCCGCAGCGGCTCTCCATTCGCC 101002 32 100.0 34 ................................ TGCTCTGCGCCATGCTGGTCGCTAGCAAGCGCTC 101068 32 100.0 34 ................................ AAGCCCTGCCTGATTGATGATCGCCCGCGCTCTG 101134 32 100.0 34 ................................ TCCGATGGTAAGGGAGGGGCCGCGCGCGACGCGG 101200 32 100.0 34 ................................ ACAAAATGGCGGAAAATGTGGTCGGGGAGACAAG 101266 32 100.0 35 ................................ CATTCGCGCGCGCTCTTCTGCGCTGATCGCGGGCC 101333 32 100.0 34 ................................ ATGATACTTGCCGATCCGCACCGGCTGTCCATAG 101399 32 100.0 35 ................................ AGGATCAAAGCGAACCGTCACACGCTGGCCAAGAA 101466 32 100.0 34 ................................ TTGCACGACCAGACCGGCAACCGGCGCTATTGGA 101532 32 100.0 34 ................................ CACGCATTACGAGGATGGCCGCCCGGTCAAGATG 101598 32 100.0 36 ................................ ACCAAAACGTCGTATCGCTTAGCGCGTATACAAGTC 101666 32 100.0 35 ................................ GCGGCAATGGCGGTGGCAAGCTGCGCTGCGGTGGT 101733 32 100.0 35 ................................ ATGGGCTGCAGGCTGACAACGCAACGCTGGTTCAG 101800 32 100.0 34 ................................ CATCAGCGCTTGGTCATGGCGGCATCGTTGTTGG 101866 32 96.9 35 .................T.............. AGCACAGTGGCGAACCAGAAGCCGCCAAAGCCGGT 101933 32 100.0 34 ................................ TCCCATCATCGGCGCTAAGGGATCTGCGCCGCGA 101999 32 100.0 34 ................................ ATGGCATCGACCTCACAAGCAAGAGGATCAGGCG 102065 32 100.0 34 ................................ TCCGATGCCCAATCCCGCGCGGGTGTCGGTTGTG 102131 32 100.0 35 ................................ CGCGTAGCCTACGCATTGCCCCGGATGACCCGCAT 102198 32 100.0 34 ................................ TACAACATGCCCGATGAAGTGGAGGACGACGAAT 102264 32 100.0 35 ................................ ACGCCAAATGCTGGCAGTCGAATATCTCATGCGGC 102331 32 100.0 33 ................................ TGCGCGGCTCCCTGCAATCAGCGTGGGCTTGTT 102396 32 100.0 35 ................................ AGCGCCACCGATCTGCGTAACGAATACGCGATCCA 102463 32 100.0 34 ................................ AAGAAGGAATCGGTGCTGCTGATCCCCGGCACGT 102529 32 100.0 35 ................................ CTCGCGGGTCATGCCCTGAGCGATGTCGAGCGCAG 102596 32 100.0 35 ................................ ATGCATCTGCCAGACCGGACATTGTGTTATATGGC 102663 32 100.0 34 ................................ CATCATCGGCTGCGATCTTTACGGCCAAAACTTC 102729 32 100.0 35 ................................ AGAGCCGCCGCCCGCAGCGCCGCCTGCGATGGCTT 102796 32 100.0 34 ................................ GCTGGGAGTCGGTGATGTGTCCCGCAGCGTGGCA 102862 32 100.0 34 ................................ AGGAAACGGATGCGGCAGCGACATACTACCTCGC 102928 32 100.0 34 ................................ TGGCGCACAATTGCACCGTCTATGTGAACGAGAG 102994 32 100.0 34 ................................ GCGCTCGTCCAGCCCTTGCGAGCCGAATACCGAT 103060 32 100.0 34 ................................ TACCGCGAGAGCCGCAGGCGCCGCGCGGGCCGCG 103126 32 100.0 33 ................................ CTCGCTGATTGCGATACCTCGACCAGCTGGACC 103191 32 100.0 34 ................................ CAGTTAAAGCTCGTGACTACGCCGGGGCGCAACT 103257 32 100.0 33 ................................ ACGGCTGACCAGCTCAGGGCGATGCCCGGCCTC 103322 32 100.0 34 ................................ CTCCATTTCGAAGGGAGGTGATCAAGCTGTTGCA 103388 32 100.0 34 ................................ TGGATCGCGATCAGCGTGGCGGTGGCCTGATCGG 103454 32 100.0 34 ................................ CATATAGACCATGGCGCTTTCGCCGGTCTGGAAA 103520 32 100.0 34 ................................ GACGTGTTTGTCACGCCGCCCGATGGCGGCAAGC 103586 32 100.0 34 ................................ CCTTGAGAGGGATGCATTTCCCATGTTGGGCGCC 103652 32 96.9 36 ..A............................. ACATAGGACAGGATCGGTATCGTGGCCTTGCCGCCC 103720 31 87.5 0 .....A.....A...-...............A | CC [103748] ========== ====== ====== ====== ================================ ==================================== ================== 58 32 99.7 34 GTCGCCCCTCACGCAGGGGCGTGGATCGAAAC # Left flank : CCCTTCATTTGGAAATAAGCGATGTTAGTTCTGGTGACATATGATGTGAATACGCAGGATGCCGAGGGGCGACGGCGCTTGCGTCGTGTGGCCAAGGCCTGTCAGGACTTTGGCCAGAGAGTGCAGAATTCGGTGTTTGAGTGTGAGGTCGATCCGGCGCGTTGGGCGATGCTGCGGGCAAGTCTCATCGCGGAAATCGATGCCCGGAAAGACAGTTTGCGGTTTTATCAGCTTGGCGCCTCGGGTAAACGGCGGGTCGAGCATGTGGGGGCAAAGCCTGCCTTGGATCTTGAAGGCCCGCTGGTGTTCTGACCGGGCAGACCATGCGCGAACCCCAAGCTGTGGGCAAAATGCCGGGAGGATCGCGCGAAAATAAGTTACTTCTTATCAATATCTTGACTTGTTTAATTGGATGATTGCTGTGGCGAGGCGTGGCAAAAGCCGTGCTTCGCGCGAAGCGGCTATATTCTCCTTCTTTCTCATCGTGTAACAGCAACCCT # Right flank : ACAGGACGTTCATCAGCGCGGATGGGAAGAACCGCCTTTGGTCGGGTGCTTCCGGTTTGCCGTCATGGAATTGCCCGCCCTCAAAGTTGCCATTCAAGCAACAAGGTTGTGCCGTCCGAAGCCGACGTACATTCACGTTTCGCAATTATCGCTATCAAAATACCTCTAGGTCAGTTAGTTGAACGCTCAAGCGAGGGAATGTTGATGAGCGAAGTTATCTCGGCCGATGCGCTCGGCCGGCTGCGTGCGGCCAAAGCTTTGATGCAAAAGGACACCGCAATTCGCGATATTCTTGAATCACGTGACAGTGTGATTGACCGTTATGGCCCACAATTCAGGCCAGGCGCAATTGAGCATGTAGAGGAAGAGGTACTGCGCTCTTTTCTGCTTATCGAGAACAACAAGCATTGGTCCGGCCTTTTCCGCCAAAGTAACCGGATTTGCGCCAATATGGCCATGACGCGCTCTGCGCTGAGTGAACTGGTTGATGAGACGCGCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCACGCAGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCTCGCGCAGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.90,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //