Array 1 54124-54395 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNGF01000001.1 Glycomyces sambucus strain CGMCC 4.3147, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 54124 29 72.4 32 AACAC.....C.TC............... ACCTGGAAGCAGCGCGGCCAGTCGGCTATCGT 54185 29 93.1 32 ..........C.T................ TCGCCGAAGAACCGGGCGCCGTAGCGTTCGGC 54246 29 100.0 32 ............................. TAGGCGCGCTGGGACTGAGACATGGTGCCGCC 54307 29 93.1 31 .......A..C.................. AAGACGTACGGCTTCGACTCCGACAAGTCTC 54367 29 82.8 0 .....T....G...T.........G..T. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 88.3 32 CTGCTCTCCATGGACGTGGAGGTGTTCCG # Left flank : AGACTGGTCGAGATCGCCGACCGGATCGGTAACTGCATCGAACATCTGGGGGCCGGTCAAGCGTCGCATTTGATCGGTGGCGGCATCGAATCGCCGCTGGCGCGGCCACTCGACGCACTCGCGTTCGACTCCGCGCTCAGCCAGGCGGCTGATCGGACTCCTGCGCCGGCGTGGCTGGACCGGCTGGGCCCGCATCGACCACGACCACCGCTGAGCGCATTGAACGCGCAGTCTGCCTGCAACCCTCCTCAACACTCGTCTGGCCTCAAGGCAGCCCTGCAACGTTGGCTTTCGCCAATCTCAGCTCGCTTGGTGGCCTCTCCATATCGGTGTGGTCGACTTAGTGCGTGTCTCGGCCCGGTGGCGTCGAGCGTCGGTACACCTCCACCTCCGTGGAGAGCAGCGTTGCCTCCACGCCACCTCGATGGTTTCGAGCGAAAACACCTCCACGTCCGTGGAGATCAGTGGTTCGAGGACACCTTCGGCAGCATCGGCGACGG # Right flank : GAACGAGGCCCGGGCACACTGGCGCCGTTATCACTTTTCGTAACTGACTGTCGCCCAGTTGCATACGTAAATTATCCTCGGGTTCTTCCAGGTGCATCCATCTAGTCTGGGAGGTCTGCTCGATGCCCTCACTTGACAACCCGTTCGCTGCAGACGGTTTGGATATCGAGGCGGTCCGTGAGCGGTTGCGGACGCTGCAGGAGAGCGCACAGGAGCGCGTCGAGTCGACCCGCCGGCTCGCCCAGACGTTGGAGACCGTCACCGGGAGGGCTTCGGATGCTTCGCGAGTGGTGACCGTCACTGTCGATTCGAGCGGGAGTGTCGTCGACCTTCAGTTGACCGAGCGGATCCGCGGGCGCCAGCCGGACTGGCTGAGCACCACCATCATGGACACGATCAAAGCCGCTCGCGCGAACCTGGCCGACCAGACGCGCGCCGCCGTCGAGCAGACCATCGGCGCCGACTCCTCGACCGGCCAGGTCGTGATGCGCCGCTTCGAG # Questionable array : NO Score: 3.48 # Score Detail : 1:0, 2:3, 3:0, 4:0.41, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCTCCATGGACGTGGAGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCACGCACGTGGAGGTGGTCCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 166153-165387 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNGF01000001.1 Glycomyces sambucus strain CGMCC 4.3147, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 166152 29 96.6 33 ................T............ TCGTCATTCATGAGCACGAACGGCGCCTCCCCG 166090 29 96.6 32 ................T............ CTCCTCACCACGCTCGACGCGCTCGGCATGAC 166029 29 96.6 33 ................T............ CTCGACGCCTGGCTCGACTACTGGCTGACCAAG 165967 29 100.0 33 ............................. CGACAGCGTCAGCTTAAGTACCTCGGCTATGAG 165905 29 100.0 32 ............................. ATCCTCGAACCCGGGGCGGAGGTGACGTAGAT 165844 29 100.0 32 ............................. ATCCGCCTCGCCGACCACGTCCTCGTCGTCGG 165783 29 100.0 32 ............................. CACATGCACGTCTCGGTCGGCCGCGGCCCGGA 165722 29 96.6 32 ..............A.............. GTCCCCAACAGCCTCCTCATAGCCCACCTCGC 165661 29 96.6 32 ..............A.............. CGTCTCACGAGGTAGACAGATTGTCAAGTTGT 165600 29 96.6 32 ..............A.............. TATGTGTTGAGCTGCCAGGCGTTCGGGCGTCC 165539 29 89.7 36 ..............A......A......T CTTTTCATCACCGGGATGAACACCGGGATGCTCGGC 165474 27 86.2 32 .....T........A.......--..... GTCCGCAGAATGCCTGGCTCGAACTCGTCGCA 165415 28 75.9 0 .A.A......T..-..A.T.......G.. | A [165394] ========== ====== ====== ====== ============================= ==================================== ================== 13 29 94.7 33 GGAGTCCCCGCCCGCGCGGGGGTGAACCG # Left flank : GCCAAACCGCGCAGCTCCGACGAACGCAAGCCCGTCCGGCTTGTTCACCTATGGGATCCCGAAACCGGTGCAGTCCCGGCAGGCACCAATTACAGCAACACCGAAAACGACTGACACATGGCAACCATGATGGTCATCGCCACCACCTCCGTCCCACTACACCTAAAAGGTGCCCTCAGCCGATGGACCATCGAAGTCGCGCCTGGCGTCTTCGTCGGCACCACCTCCAAGCGGGTACGTGAACAGCTCTGGGACCTCACCCAGCAGGCCGTTGCCGACGGCGCCGCCGTCCTCATCCACACAGCCGCGAACGAACAAGGCTTCTCGATAAAAACCGCAGGCGAACGGCGCCGACGCCCTGAGGATTTCGATGGACTGACCTTGGTGAGATTCGTTGCTCAATCGCCCGATCCGGATACGACGTCGGCGGAGTCCGAATGGCCCACCGACTTTTGATCACAGAACTGCATTAGGTGCCTAAACCTGCAAGTCAAGAAGAG # Right flank : AATACCGATTTCAGATGCGTCGGGGGCGAGTAGCGCGCCATAGCTGTTTGACTGCGCACCTTGCTAGAAGTGCGGCGCAGGGCTGCGCCGCGCCTAGATACCCTATCGTCGGCATCCCTCGAAGCCATTCTGCATGGGCGACTCTGATGCCCAGCATGAGCCACCATCCTGTGATCAGCAAGGCACCGAACAACAGCAGGAGTCCATATCCTGACGCGCGCATCTCCCGGCTGAGCTTTTCAATGAATATCGGAAGTTCCACTCTCCTACCACTATGATGACTCATTGCGTCAGCCATTCCCAAAGTTGCGCCTTCGCCGCGCGAATCTGGTTGGATGCAGATTCTTCCGTTATTTCCTCGGCTTCGGCGACGGCGCTGATCGGCAGCTTCTCGATCACGACTTTCAGGATGAGTATTGCCTGAAGTCTGGTTACGATCTCGTTATCGATCGCCTTTGCTAGGACGAGATCGGGGTGTCCGAACTCTTTGGCAGGAGGGT # Questionable array : NO Score: 5.49 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAGTCCCCGCCCGCGCGGGGGTGAACCG # Alternate repeat : GGAGTCCCCGCCCGCGTGGGGGTGAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCCCGCGCGGGGATGAACCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 177302-178060 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNGF01000001.1 Glycomyces sambucus strain CGMCC 4.3147, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 177302 29 100.0 32 ............................. TGCTACCTGCACGCCGACCGGACCGACCGCGC 177363 29 100.0 32 ............................. CTGTCGGGCCTGTCCAAGGGCGCCGTCGAGGA 177424 29 100.0 32 ............................. GATTTCAAGGTCGTCGACCTCGGCGGCGAGTT 177485 29 100.0 32 ............................. ACCAGGCGTGGGCCAGGTGGCAGCGCATGGCC C [177494] 177547 29 100.0 32 ............................. TACTCGCTCGAAGACGCCGTGGCCGCGCTGCC 177608 29 100.0 32 ............................. CGGGCCCGCATGACCTCGGCTCCTCGGCGGGC 177669 29 100.0 32 ............................. CCGTGCGAGACGTGCACGGACTGCCACGCGTG 177730 29 96.6 32 .....T....................... CACCCGTTCCTGAACAGGTTCGTGAACGTCGG 177791 29 93.1 32 ..C...................C...... ACAGCGACAAACAACCTCTTGACGGTTGCCCT 177852 29 72.4 29 ..C................T.AACCG..A CAAGCACGGCGCCAACCGCGGAGAGCACG 177910 29 96.6 32 ..C.......................... TTCGGCATGCAGGAGATCAATCTCGCCCGCAC 177971 29 96.6 32 ..C.......................... GCCCTCGTGGAGTAGGCGAAAGGCGTGCCCAG 178032 29 93.1 0 ........T............A....... | ========== ====== ====== ====== ============================= ================================ ================== 13 29 96.0 32 GAACTCCCCGCCAGCGCGGGGGTGAACCG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGC # Right flank : GATGCGAACCAAGACCGAATGGCCGACCACCTTCCGAAAAACCTGACGACACCCAGCCTGCCCGCAATCCCTGCTCGCGCGAGGGTTATTTGTGGTTACTCACCACCGGTGCTCAACAGCGCCACTTTGCGAATCCGGAAACTGTGGCGGAAGGGGCCGATCGACCCCCTCCGCCACCTCAGCTTTTAGAATTGCGCAACGCTCACTCCATCAACTACGCGCCGCGAGTCGCGCCGATACTTCAACCCCGACATCGTTGTATACTGAATGGATCGCGAAGCCTCTTGATCTGCGAAAAGGATGCTGCTCAAGTGGGTGAGGTTTATTGTCATAGCCCGCCATGGATCGAAACCGACACTCGGGCACTTACTTCTCAGACTTACGTTCGAACCGCCTTCAAGATTCGGTCGGGCAAGCTTCAAAGAGCGCATGTGCGTCGGCGCATCAGACGCCGATAGGTCTCCTGGCGCTGGGTCAGCAGTCTCAGATGATCATTCAAC # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAACTCCCCGCCAGCGCGGGGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCCGACGCGGGGGTGAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.60,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [5.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //