Array 1 249087-252953 **** Predicted by CRISPRDetect 2.4 *** >NZ_UIUM01000003.1 Klebsiella pneumoniae strain EuSCAPE_GR117, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249087 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249146 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249207 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249268 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249329 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249390 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249451 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 249512 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 249573 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 249634 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 249695 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 249756 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 249817 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 249878 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 249939 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 250000 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 250061 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 250122 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 250183 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250244 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250305 29 100.0 10 ............................. ACATAGCGCC Deletion [250344] 250344 22 51.7 0 CGA.A.G.A...........T.------- - Deletion [250359] 250366 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 250427 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 250488 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 250549 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 250610 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 250671 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 250732 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 250793 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 250854 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 250915 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 250976 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 251037 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 251098 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 251159 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 251220 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 251281 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 251342 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 251403 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 251464 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251525 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251586 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251647 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 251708 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251769 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 251830 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 251891 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 251952 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 252013 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 252074 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 252135 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 252196 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 252257 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 252318 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 252379 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 252440 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 252501 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 252562 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 252623 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 252684 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 252745 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 252806 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 252867 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 252925 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 98.5 31 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [11-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //