Array 1 75297-75855 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJSY01000032.1 Fusobacterium necrophorum subsp. funduliforme ATCC 51357 contig00003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 75297 30 100.0 37 .............................. GCATCTGATTCATTCTCATATTTTGAACTTCTAATTC 75364 30 100.0 37 .............................. TGAAAAACTTCCAAACACGCTGACAAAGGAGCAACTA 75431 30 100.0 37 .............................. ATCGAAAATTTTACGTTAAGAGAGCTTTCTGGAAAGA 75498 30 100.0 36 .............................. AACTCAGGAAATCAACGTCAGGAACTAAACGGAAAA 75564 30 100.0 35 .............................. GCAACTCCTCTAACATCGCCCCTAATTTCACACGA 75629 30 100.0 36 .............................. TCGGCAGTTCGGGACGCCTTAAAAGAAGCGGGAAAT 75695 30 100.0 36 .............................. AATGTAGCCTTAATTCTCCATGATCGCCATACTCTA 75761 30 96.7 36 ........................C..... TTTTATCGATTCTCATCACAATTTGAGCAACATCTT 75827 29 93.3 0 .......................-.....T | ========== ====== ====== ====== ============================== ===================================== ================== 9 30 98.9 36 GACTAAATCCAAGTAGATTGGAATTTTAAC # Left flank : AAAAATTTAGATACTGTGAAGAAAAATTATTGAATCTTTCTTTTTATAATCATCAAGATAAAAAGAAAGAGGAAAGTATAAGAGTATTTCTTATAAGAGATAAAAATAGTGATAATTTTAAATTTGAATCAATATTAGACGATGGCAGTAATAAGATATTTATTTCTAAAAATGGAAAAGAAATTACAATACAATGTTGTGATAAAGTATTAGAAACTTTAATAATAGAAAAAAATACTTTAAAGATAAGTTCAAATGGAAAAATTATTTCTTTAATTCCTCATTATTCTTACTCTATTGATGTAAAGTATTAAAAAAATTTTTTGTCGACCTTTCATAGTGTAAAATTTATGCTAGGTCGACAAGAGTATAAAAGCATAATATTATGCTTTTTTCTATAATTGAAGTTGTATTTGAGGCATTATTTTGATATAATTTTATTCATATAGACAATAAGGCTATTATAAATATTTCAAAATATTAGAGTAATAGTAACACTA # Right flank : TATTGTTAATAAAAATCTTTAGAAAATAACTTTAAATAATAGATTTTTTTTATTCAAAACTTGAAATAAGATTTACATAAAAGCTTAAAAAGGGAGATTCCATTCTCTCTTTTTTCATAATTTCTTTCTTTTTTATATAAAGTTTGCTATACTGAAGGTGAAAACTCGTGAAAGGAAAGAAAGCATGGAAAAAGAAAAAATCAAGGAAATGTTGGAAGAACGCTTTCAAGTAATTCCTGCATACCCTAGAAAACGACATATTCTTTTTTGGTATGATGGACAGAAAGCATTTCAAGATATTATAGAGGAATTACAGCTTGATAAAGTAAAAATCCTTCGTTTGCAAAAAGGAGTCAATCGAAATGGAGAAGAAATTGATACCAATCTTTTTAAAATAAAATATACTTTGGAGATTTTGGATACGGATTCTCATTATTTAATTTATAGTGCTAATCCAAGACCCTCTAAGCATGAAAATTATCTCTTAGATATAGAAAGCT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACTAAATCCAAGTAGATTGGAATTTTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.50,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-88.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 79013-76865 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJSY01000007.1 Fusobacterium necrophorum subsp. funduliforme ATCC 51357 contig00002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 79012 30 100.0 37 .............................. CTCAAGGTATATTGGTTTCTTTGCTATATGAAGCCAA 78945 30 100.0 37 .............................. GATGAATATATAGAAACTTTAGTAAATCGACTCATAG 78878 30 100.0 35 .............................. CGTTAAATAGCGTATCGAAAACGAGCGAGAATTGA 78813 30 100.0 37 .............................. AAATATTCATTATTTCTCAATTTGTGAGAAATAAGGA 78746 30 100.0 36 .............................. TTTTAAGACAGGAAAGAACCCTTTGTTCAGAAGCCC 78680 30 100.0 36 .............................. TCTTTGGAGACGGTTCGGATTAGCTTGACAGGCAAT 78614 30 100.0 37 .............................. ATTTCTAATCGAATCTGTTCGATACTTTCGAAATATA 78547 30 100.0 35 .............................. CTACGATTACAGAAATCAACTATGCGGCGGGGATC 78482 30 100.0 35 .............................. CTTTGTGTCGTATTCCCTGTTTGTGTTGTATTGCC 78417 30 100.0 37 .............................. AAAAATTGGGACTAAGAAATTGAAATCCATAGTGGTC 78350 30 100.0 37 .............................. GAAGCAAGGAGACATACATAGACAAAGAAAAATATTT 78283 30 100.0 36 .............................. CTCAATAAATTGTCATAAGCTTTCTTATACAAAGCC 78217 30 100.0 37 .............................. TTTTCTGTCGCAAGATATCGCTTCGTTGCAGCGTCTT 78150 30 100.0 35 .............................. TTCCATGGGCTTCCATTAAACTCGTCATAATCTAC 78085 30 100.0 37 .............................. TCAGCTTTTATAGCTTGTTGAATCGGTTTGTATAATA 78018 30 100.0 37 .............................. AGAAATTATATAAACTTCTTCATTCCCGATCTTAAAA 77951 30 100.0 36 .............................. TTCTGACCCGGTCATCTTGCATTGTGTGCCAGATAT 77885 30 100.0 37 .............................. GAAAGGATTGAACCTTGAAAAACTGCCTAACTCTTTG 77818 30 100.0 35 .............................. TAGAAGGAACTATATGGTTTGATAGTGCTAACGGA 77753 30 100.0 38 .............................. TATATCCACTATCAAAACAATCCCTCCCGCTCCTATTC 77685 30 100.0 37 .............................. GAAATTTATGCAAATTTACAGGATAAGGAAAGAAAAA 77618 30 96.7 35 ...............A.............. CGTTTCGGCTCAAAATTTAATGAAATGCTAGAAAA 77553 30 96.7 36 ...............A.............. TATTATTTAACTGGGTATTGTACTTGTGCTGAGTGT 77487 30 96.7 36 ...............A.............. GCTGAAATAAGACAATATTGTCTAAGAAAAAAGAGA 77421 30 96.7 35 ...............A.............. GTGAAGAGAGAGAGAAATACAGACATGAATTAGAA 77356 30 96.7 35 ...............A.............. AAATAATAAGGATATGGCTGTGTTTCCGGATGACT 77291 30 100.0 36 .............................. AATTCTGATATTGTTTGATTAAATATAAAGTGACCA 77225 30 100.0 35 .............................. GTTCCGGTATCTCGGTTTTGATTTTCTCCGCTATC 77160 30 100.0 36 .............................. TCTCCTCTGTTGAACAGATGACCTATGATTGCATAA 77094 30 100.0 36 .............................. TTTAAACTTCCAAACTTCTCTCCCTCATTTAACAAA 77028 30 96.7 36 ...............A.............. TTTAACATCCCAATACTTCTTCCGCCGTCTTGTAGA 76962 30 96.7 37 ........................A..... TTTCTTACTATCTGGAAACATGCTATTTTTTCAACAA 76895 30 73.3 0 ..C........TT....A.TT...TA.... | T [76873] ========== ====== ====== ====== ============================== ====================================== ================== 33 30 98.5 36 ATTAGAGTATTACTAGAGTAGAATGTAAAT # Left flank : TTCCAAATGTGGTGGTGATAAAATATGTATGTAGTAGTTGTATATGATATCTCTTTAGATGAGAAAGGGACTTATCATTGGAAAAAAATTTTTCAAATTTGCAAACGATATTTGCATCATATTCAAAACTCTGTGTTTGAAGGAGAACTATCGGAAGTGGATATTGAGAGATTAAAATATGAAGTATCTAATTATATTAGAGATAATCTAGATTCTTTTATTATTTTTAAATCTCGGAATGAGAGATGGATGGAAAAAGAAATGTTAGGAATACAAGAAGACAAAACAGATAATTTTCTGTAGATATTTTCATTGTCGACCTCTCATAAGGTAAAAATCTCAGGACATTGACAAAAGAATAAAAGAACTTGATTTTCCAAGAAAAAAAGTAAAGATAGAAAAATAAAAAAGGGTTTTCTCTTAATTTTTTTTATAAAATAACTTTATCGACAATTATAGTCAAAAAAAGTTATAGATAGCAATGTATTTTAAAGTCTCGT # Right flank : TTGAACTATAACTAAAAAAGAGGTAAAAATGTTATGTTGGATTAAAAATTTGCAATATATGGGTTCATTATTGAAGATTGTTTGAGAGTTTCTTTTGAATTAAAAAAAGGGAGCTTTCATTGTAAGAGAATACGTAAGGATATGGTACACATAATCAGGTTACTGGAACTTCGTCCGACGACATCACCGTGATGTTGACAACTTTAGATTCCTTAAAACAAAGTGAAAGAGAAATTAATATGGAAGATATGAAAAAAAGATTTAGTAATTGTACAAATGACGAGATTGACAAGAGTTCAGAAATTACACATGTTCACTCTATTTCAAAAGAAGCTTGCAGAATTTATGTGGAAATAGTGAAAAGTCTGATTATAAATAAAAATTTAAAAGACATCTTAGAGAATTTGGAATGTACAAAAAATTTTCAAGATTAAAACATCTCGATACTTTGTAGGAAGAGCAATATATTATGAACGCTTTAGGAGGTAGTTTGTGATGTG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAGTATTACTAGAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //